Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6788.t1
Gene name
Locationscaffold_043:270989..272074
Strand-
Gene length (bp)1085
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07798 CCDC90-like Coiled-coil domain-containing protein 90-like 4.2E-56 134 308

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 286 308 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6788.t1
MAPQKSVTEVPRSLIPRLTWNGSSARTTITSPQTTALPAKRQQKQHMVRGWISVGRQLHTSTSRSATRLIVPATS
RDLGTSSIARRFPATTKPTSQPAAPLGNPIRHNGVYVAAFTPARRAFHASASRQRDHHFDTLKFVQRLKDEGFSE
EQAVAMMRVLNDVIQESIQNLTRTMVLREDTERSAYTQKVDFAKLRSELLNADSTEAQLTRSSHEKIAADLAKLN
SRLRDEIGRTQASVRLDLNLEKGRIREEANGQEMRIKETETRIEQEVAGLRERVEAVKFSTLQWLMGVCTGTAAL
ILGAWRLFM*
Coding >Ani_SJS100_1|g6788.t1
ATGGCGCCCCAGAAATCTGTGACAGAGGTGCCCCGTTCCCTTATTCCCCGTCTGACTTGGAACGGCTCCTCTGCC
CGTACTACTATCACTTCTCCCCAGACTACTGCCCTACCAGCGAAGCGCCAACAAAAGCAACATATGGTACGGGGC
TGGATTTCTGTCGGACGACAACTGCATACTTCGACTTCCCGGTCCGCTACTCGCTTAATAGTCCCCGCAACATCC
CGAGATCTAGGCACATCATCGATCGCAAGACGGTTCCCTGCCACAACCAAGCCGACCAGTCAACCAGCCGCACCC
CTCGGAAACCCCATCCGGCATAACGGTGTCTATGTCGCTGCATTCACTCCTGCTCGGAGAGCTTTCCATGCTTCC
GCTTCGCGCCAGCGCGACCATCACTTTGATACGTTGAAATTCGTCCAGCGATTGAAAGACGAGGGGTTTAGCGAA
GAGCAGGCTGTTGCCATGATGCGGGTTCTGAACGACGTCATTCAGGAGTCCATCCAGAACTTGACCCGCACAATG
GTGCTTCGGGAAGACACGGAACGATCAGCCTACACACAGAAAGTCGACTTTGCCAAACTCCGCTCCGAGCTCCTC
AACGCAGATTCTACCGAAGCGCAATTGACTCGCTCGTCGCACGAAAAGATCGCCGCTGATCTCGCCAAACTCAAC
TCGCGTCTACGCGATGAGATCGGTCGCACGCAGGCATCGGTGCGTCTTGATCTGAATCTGGAGAAAGGTCGTATC
CGGGAAGAAGCCAATGGCCAAGAAATGCGTATAAAGGAGACCGAAACGAGAATTGAGCAGGAAGTGGCTGGGCTG
AGAGAGCGTGTAGAGGCTGTCAAGTTCTCCACGTTACAATGGCTCATGGGTGTATGCACTGGTACCGCTGCTCTG
ATTCTTGGTGCTTGGCGTCTCTTCATGTGA
Transcript >Ani_SJS100_1|g6788.t1
ATGGCGCCCCAGAAATCTGTGACAGAGGTGCCCCGTTCCCTTATTCCCCGTCTGACTTGGAACGGCTCCTCTGCC
CGTACTACTATCACTTCTCCCCAGACTACTGCCCTACCAGCGAAGCGCCAACAAAAGCAACATATGGTACGGGGC
TGGATTTCTGTCGGACGACAACTGCATACTTCGACTTCCCGGTCCGCTACTCGCTTAATAGTCCCCGCAACATCC
CGAGATCTAGGCACATCATCGATCGCAAGACGGTTCCCTGCCACAACCAAGCCGACCAGTCAACCAGCCGCACCC
CTCGGAAACCCCATCCGGCATAACGGTGTCTATGTCGCTGCATTCACTCCTGCTCGGAGAGCTTTCCATGCTTCC
GCTTCGCGCCAGCGCGACCATCACTTTGATACGTTGAAATTCGTCCAGCGATTGAAAGACGAGGGGTTTAGCGAA
GAGCAGGCTGTTGCCATGATGCGGGTTCTGAACGACGTCATTCAGGAGTCCATCCAGAACTTGACCCGCACAATG
GTGCTTCGGGAAGACACGGAACGATCAGCCTACACACAGAAAGTCGACTTTGCCAAACTCCGCTCCGAGCTCCTC
AACGCAGATTCTACCGAAGCGCAATTGACTCGCTCGTCGCACGAAAAGATCGCCGCTGATCTCGCCAAACTCAAC
TCGCGTCTACGCGATGAGATCGGTCGCACGCAGGCATCGGTGCGTCTTGATCTGAATCTGGAGAAAGGTCGTATC
CGGGAAGAAGCCAATGGCCAAGAAATGCGTATAAAGGAGACCGAAACGAGAATTGAGCAGGAAGTGGCTGGGCTG
AGAGAGCGTGTAGAGGCTGTCAAGTTCTCCACGTTACAATGGCTCATGGGTGTATGCACTGGTACCGCTGCTCTG
ATTCTTGGTGCTTGGCGTCTCTTCATGTGA
Gene >Ani_SJS100_1|g6788.t1
ATGGCGCCCCAGAAATCTGTGACAGAGGTGCCCCGTTCCCTTATTCCCCGTCTGACTTGGAACGGCTCCTCTGCC
CGTACTACTATCACTTCTCCCCAGACTACTGCCCTACCAGCGAAGCGCCAACAAAAGCAACATATGGTACGGGGC
TGGATTTCTGTCGGACGACAACTGCATACTTCGACTTCCCGGTCCGCTACTCGCTTAATAGTCCCCGCAACATCC
CGAGATCTAGGCACATCATCGATCGCAAGACGGTTCCCTGCCACAACCAAGCCGACCAGTCAACCAGCCGCACCC
CTCGGAAACCCCATCCGGCATAACGGTGTCTATGTCGCTGCATTCACTCCTGCTCGGAGAGCTTTCCATGCTTCC
GCTTCGCGCCAGCGCGACCATCACTTTGATACGTTGAAATTCGTCCAGCGATTGAAAGACGAGGGGTTTAGCGAA
GAGCAGGCTGTTGCCATGATGCGGGTTCTGAACGACGTCATTCAGGAGTCCATCCAGAACTTGACCCGCACAATG
GTGCTTCGGGAAGGTTAGTCGCTCCTGTGTTCATGCGTTTCTGTGCCTGGGGTAGTCTTTCATATCCATGCATGT
TATAACCCAAGAGCATTTACATTCTAAGTCCATCTCTACAGACACGGAACGATCAGCCTACACACAGAAAGTCGA
CTTTGCCAAACTCCGCTCCGAGCTCCTCAACGCAGATTCTACCGAAGCGCAATTGACTCGCTCGTCGCACGAAAA
GATCGCCGCTGATCTCGCCAAACTCAACTCGCGTCTACGCGATGAGATCGGTCGCACGCAGGCATCGGTGCGTCT
TGATCTGAATCTGGAGAAAGGTCGTATCCGGGAAGAAGCCAATGGCCAAGAAATGCGTATAAAGGAGACCGAAAC
GAGAATTGAGCAGGAAGTGGCTGGGCTGAGAGAGCGTGTAGAGGCTGTCAAGTTCTCCACGTTACAATGGCTCAT
GTAAGCGGCATCCGACACTCCACAAAATACAATGCTGACAGATCTTTACTAGGGGTGTATGCACTGGTACCGCTG
CTCTGATTCTTGGTGCTTGGCGTCTCTTCATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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