Protein ID | Ani_SJS100_1|g6788.t1 |
Gene name | |
Location | scaffold_043:270989..272074 |
Strand | - |
Gene length (bp) | 1085 |
Transcript length (bp) | 930 |
Coding sequence length (bp) | 930 |
Protein length (aa) | 310 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07798 | CCDC90-like | Coiled-coil domain-containing protein 90-like | 4.2E-56 | 134 | 308 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 26 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 286 | 308 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6788.t1 MAPQKSVTEVPRSLIPRLTWNGSSARTTITSPQTTALPAKRQQKQHMVRGWISVGRQLHTSTSRSATRLIVPATS RDLGTSSIARRFPATTKPTSQPAAPLGNPIRHNGVYVAAFTPARRAFHASASRQRDHHFDTLKFVQRLKDEGFSE EQAVAMMRVLNDVIQESIQNLTRTMVLREDTERSAYTQKVDFAKLRSELLNADSTEAQLTRSSHEKIAADLAKLN SRLRDEIGRTQASVRLDLNLEKGRIREEANGQEMRIKETETRIEQEVAGLRERVEAVKFSTLQWLMGVCTGTAAL ILGAWRLFM* |
Coding | >Ani_SJS100_1|g6788.t1 ATGGCGCCCCAGAAATCTGTGACAGAGGTGCCCCGTTCCCTTATTCCCCGTCTGACTTGGAACGGCTCCTCTGCC CGTACTACTATCACTTCTCCCCAGACTACTGCCCTACCAGCGAAGCGCCAACAAAAGCAACATATGGTACGGGGC TGGATTTCTGTCGGACGACAACTGCATACTTCGACTTCCCGGTCCGCTACTCGCTTAATAGTCCCCGCAACATCC CGAGATCTAGGCACATCATCGATCGCAAGACGGTTCCCTGCCACAACCAAGCCGACCAGTCAACCAGCCGCACCC CTCGGAAACCCCATCCGGCATAACGGTGTCTATGTCGCTGCATTCACTCCTGCTCGGAGAGCTTTCCATGCTTCC GCTTCGCGCCAGCGCGACCATCACTTTGATACGTTGAAATTCGTCCAGCGATTGAAAGACGAGGGGTTTAGCGAA GAGCAGGCTGTTGCCATGATGCGGGTTCTGAACGACGTCATTCAGGAGTCCATCCAGAACTTGACCCGCACAATG GTGCTTCGGGAAGACACGGAACGATCAGCCTACACACAGAAAGTCGACTTTGCCAAACTCCGCTCCGAGCTCCTC AACGCAGATTCTACCGAAGCGCAATTGACTCGCTCGTCGCACGAAAAGATCGCCGCTGATCTCGCCAAACTCAAC TCGCGTCTACGCGATGAGATCGGTCGCACGCAGGCATCGGTGCGTCTTGATCTGAATCTGGAGAAAGGTCGTATC CGGGAAGAAGCCAATGGCCAAGAAATGCGTATAAAGGAGACCGAAACGAGAATTGAGCAGGAAGTGGCTGGGCTG AGAGAGCGTGTAGAGGCTGTCAAGTTCTCCACGTTACAATGGCTCATGGGTGTATGCACTGGTACCGCTGCTCTG ATTCTTGGTGCTTGGCGTCTCTTCATGTGA |
Transcript | >Ani_SJS100_1|g6788.t1 ATGGCGCCCCAGAAATCTGTGACAGAGGTGCCCCGTTCCCTTATTCCCCGTCTGACTTGGAACGGCTCCTCTGCC CGTACTACTATCACTTCTCCCCAGACTACTGCCCTACCAGCGAAGCGCCAACAAAAGCAACATATGGTACGGGGC TGGATTTCTGTCGGACGACAACTGCATACTTCGACTTCCCGGTCCGCTACTCGCTTAATAGTCCCCGCAACATCC CGAGATCTAGGCACATCATCGATCGCAAGACGGTTCCCTGCCACAACCAAGCCGACCAGTCAACCAGCCGCACCC CTCGGAAACCCCATCCGGCATAACGGTGTCTATGTCGCTGCATTCACTCCTGCTCGGAGAGCTTTCCATGCTTCC GCTTCGCGCCAGCGCGACCATCACTTTGATACGTTGAAATTCGTCCAGCGATTGAAAGACGAGGGGTTTAGCGAA GAGCAGGCTGTTGCCATGATGCGGGTTCTGAACGACGTCATTCAGGAGTCCATCCAGAACTTGACCCGCACAATG GTGCTTCGGGAAGACACGGAACGATCAGCCTACACACAGAAAGTCGACTTTGCCAAACTCCGCTCCGAGCTCCTC AACGCAGATTCTACCGAAGCGCAATTGACTCGCTCGTCGCACGAAAAGATCGCCGCTGATCTCGCCAAACTCAAC TCGCGTCTACGCGATGAGATCGGTCGCACGCAGGCATCGGTGCGTCTTGATCTGAATCTGGAGAAAGGTCGTATC CGGGAAGAAGCCAATGGCCAAGAAATGCGTATAAAGGAGACCGAAACGAGAATTGAGCAGGAAGTGGCTGGGCTG AGAGAGCGTGTAGAGGCTGTCAAGTTCTCCACGTTACAATGGCTCATGGGTGTATGCACTGGTACCGCTGCTCTG ATTCTTGGTGCTTGGCGTCTCTTCATGTGA |
Gene | >Ani_SJS100_1|g6788.t1 ATGGCGCCCCAGAAATCTGTGACAGAGGTGCCCCGTTCCCTTATTCCCCGTCTGACTTGGAACGGCTCCTCTGCC CGTACTACTATCACTTCTCCCCAGACTACTGCCCTACCAGCGAAGCGCCAACAAAAGCAACATATGGTACGGGGC TGGATTTCTGTCGGACGACAACTGCATACTTCGACTTCCCGGTCCGCTACTCGCTTAATAGTCCCCGCAACATCC CGAGATCTAGGCACATCATCGATCGCAAGACGGTTCCCTGCCACAACCAAGCCGACCAGTCAACCAGCCGCACCC CTCGGAAACCCCATCCGGCATAACGGTGTCTATGTCGCTGCATTCACTCCTGCTCGGAGAGCTTTCCATGCTTCC GCTTCGCGCCAGCGCGACCATCACTTTGATACGTTGAAATTCGTCCAGCGATTGAAAGACGAGGGGTTTAGCGAA GAGCAGGCTGTTGCCATGATGCGGGTTCTGAACGACGTCATTCAGGAGTCCATCCAGAACTTGACCCGCACAATG GTGCTTCGGGAAGGTTAGTCGCTCCTGTGTTCATGCGTTTCTGTGCCTGGGGTAGTCTTTCATATCCATGCATGT TATAACCCAAGAGCATTTACATTCTAAGTCCATCTCTACAGACACGGAACGATCAGCCTACACACAGAAAGTCGA CTTTGCCAAACTCCGCTCCGAGCTCCTCAACGCAGATTCTACCGAAGCGCAATTGACTCGCTCGTCGCACGAAAA GATCGCCGCTGATCTCGCCAAACTCAACTCGCGTCTACGCGATGAGATCGGTCGCACGCAGGCATCGGTGCGTCT TGATCTGAATCTGGAGAAAGGTCGTATCCGGGAAGAAGCCAATGGCCAAGAAATGCGTATAAAGGAGACCGAAAC GAGAATTGAGCAGGAAGTGGCTGGGCTGAGAGAGCGTGTAGAGGCTGTCAAGTTCTCCACGTTACAATGGCTCAT GTAAGCGGCATCCGACACTCCACAAAATACAATGCTGACAGATCTTTACTAGGGGTGTATGCACTGGTACCGCTG CTCTGATTCTTGGTGCTTGGCGTCTCTTCATGTGA |