© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g678.t1 |
| Gene name | |
| Location | scaffold_002:716239..717816 |
| Strand | - |
| Gene length (bp) | 1577 |
| Transcript length (bp) | 1494 |
| Coding sequence length (bp) | 1494 |
| Protein length (aa) | 498 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.9E-31 | 61 | 446 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.1E-08 | 89 | 230 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 53 | 75 | 22 |
| 2 | 90 | 112 | 22 |
| 3 | 119 | 136 | 17 |
| 4 | 146 | 168 | 22 |
| 5 | 180 | 202 | 22 |
| 6 | 217 | 239 | 22 |
| 7 | 291 | 313 | 22 |
| 8 | 323 | 345 | 22 |
| 9 | 366 | 388 | 22 |
| 10 | 398 | 420 | 22 |
| 11 | 427 | 449 | 22 |
| 12 | 464 | 486 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g678.t1 MTVVDPTAQPPPSRPADAEKGKAGHAGGPDPNLVTWEENDPENPHNFSTAYKCWITFQLGLLALSASLGSSIISP AETELKAYLKIGTEVSILPVSLYILGFAFGPLCWAPISELFGRRWSMLPAVFILGLFSIGTATSKNTASVLITRY FAGLFGSAPVSNVSAALGDIFHMKARGIASTSYAICVVGGPTMGPIIGAALVSNPHLGWRWTEYIEAIIVFFIFG ITFFCLPEVYGPVLLHRKAVRMRKETGNDELYHPHEHIKVDVHSIVTKHFSRPLVMLVTEPMVTVIALYASFTYA LLYLTLEVFPIVFDDIRQWKPVVATLPFIGLFVGVLLSSAFIIFIGQPYYIRKWEEGGGKPVPEARLMPMAVGGF LFAGGLFWFGWTAEPKYSWGLPVVAAMVFGCGFCIIFGQCINFLVDTYGPYAASATASNTFLRSVLAAAFPLFSQ PMFRNLGVGPAMSILGGVAAAAIPVPFLFMIYGVRLRKMSRFAPFKG* |
| Coding | >Ani_SJS100_1|g678.t1 ATGACTGTCGTCGACCCTACGGCCCAGCCGCCACCATCTCGACCAGCAGATGCAGAAAAGGGCAAGGCCGGACAT GCAGGCGGCCCCGATCCTAACCTAGTGACATGGGAGGAAAACGACCCCGAAAATCCACATAACTTCTCGACGGCG TACAAATGCTGGATCACGTTTCAGCTGGGTTTATTGGCGTTGAGCGCCAGTCTGGGATCCAGTATTATTTCCCCG GCGGAGACGGAACTCAAGGCTTATTTGAAGATTGGCACGGAAGTTAGTATTCTTCCGGTGTCGCTTTATATTCTC GGCTTCGCCTTCGGCCCCCTATGCTGGGCGCCCATTTCCGAACTCTTCGGCCGACGATGGTCGATGCTGCCCGCG GTATTCATCCTGGGACTGTTCAGCATCGGCACCGCAACCAGCAAAAACACCGCCTCAGTTCTCATCACCCGGTAC TTCGCGGGCCTGTTCGGCTCCGCACCAGTCAGTAATGTCTCCGCCGCGCTCGGCGACATCTTCCACATGAAGGCG CGCGGCATCGCCAGCACCTCGTACGCCATCTGCGTCGTCGGCGGCCCAACCATGGGACCCATCATCGGGGCTGCG CTGGTCTCGAATCCGCACCTAGGGTGGCGCTGGACCGAGTACATCGAAGCCATCATCGTGTTCTTCATCTTCGGT ATCACCTTCTTCTGTCTGCCGGAGGTATACGGCCCCGTGCTGCTGCATCGTAAGGCGGTGCGTATGCGCAAGGAG ACCGGGAATGACGAACTGTATCATCCGCACGAGCATATCAAGGTGGACGTGCATAGTATCGTCACGAAGCATTTT TCGCGTCCGCTGGTCATGCTTGTTACGGAACCGATGGTTACGGTGATTGCGCTGTATGCGTCGTTTACGTATGCG TTGCTGTATCTCACCTTGGAGGTGTTCCCTATTGTTTTTGATGATATTCGCCAGTGGAAACCTGTGGTTGCTACG CTGCCGTTCATCGGCCTGTTCGTCGGCGTGCTGCTATCCTCTGCATTCATTATCTTCATCGGCCAGCCGTACTAC ATCCGCAAGTGGGAGGAAGGTGGCGGTAAGCCTGTGCCGGAGGCGCGTCTGATGCCCATGGCTGTTGGGGGGTTC TTGTTCGCGGGTGGTCTGTTCTGGTTTGGGTGGACGGCTGAGCCTAAGTATTCATGGGGGTTGCCGGTTGTGGCG GCGATGGTGTTTGGATGTGGGTTTTGTATTATCTTTGGGCAGTGTATCAACTTTCTGGTCGATACGTATGGGCCT TATGCGGCGTCGGCGACGGCTTCGAATACTTTCCTGCGGAGTGTGTTGGCTGCTGCATTTCCGCTGTTCTCGCAG CCGATGTTTCGCAATTTGGGGGTTGGGCCGGCCATGTCCATTTTGGGGGGCGTCGCCGCGGCGGCGATCCCGGTG CCGTTTTTGTTCATGATTTACGGGGTCAGGTTGAGGAAGATGTCGAGGTTTGCGCCATTTAAGGGGTAG |
| Transcript | >Ani_SJS100_1|g678.t1 ATGACTGTCGTCGACCCTACGGCCCAGCCGCCACCATCTCGACCAGCAGATGCAGAAAAGGGCAAGGCCGGACAT GCAGGCGGCCCCGATCCTAACCTAGTGACATGGGAGGAAAACGACCCCGAAAATCCACATAACTTCTCGACGGCG TACAAATGCTGGATCACGTTTCAGCTGGGTTTATTGGCGTTGAGCGCCAGTCTGGGATCCAGTATTATTTCCCCG GCGGAGACGGAACTCAAGGCTTATTTGAAGATTGGCACGGAAGTTAGTATTCTTCCGGTGTCGCTTTATATTCTC GGCTTCGCCTTCGGCCCCCTATGCTGGGCGCCCATTTCCGAACTCTTCGGCCGACGATGGTCGATGCTGCCCGCG GTATTCATCCTGGGACTGTTCAGCATCGGCACCGCAACCAGCAAAAACACCGCCTCAGTTCTCATCACCCGGTAC TTCGCGGGCCTGTTCGGCTCCGCACCAGTCAGTAATGTCTCCGCCGCGCTCGGCGACATCTTCCACATGAAGGCG CGCGGCATCGCCAGCACCTCGTACGCCATCTGCGTCGTCGGCGGCCCAACCATGGGACCCATCATCGGGGCTGCG CTGGTCTCGAATCCGCACCTAGGGTGGCGCTGGACCGAGTACATCGAAGCCATCATCGTGTTCTTCATCTTCGGT ATCACCTTCTTCTGTCTGCCGGAGGTATACGGCCCCGTGCTGCTGCATCGTAAGGCGGTGCGTATGCGCAAGGAG ACCGGGAATGACGAACTGTATCATCCGCACGAGCATATCAAGGTGGACGTGCATAGTATCGTCACGAAGCATTTT TCGCGTCCGCTGGTCATGCTTGTTACGGAACCGATGGTTACGGTGATTGCGCTGTATGCGTCGTTTACGTATGCG TTGCTGTATCTCACCTTGGAGGTGTTCCCTATTGTTTTTGATGATATTCGCCAGTGGAAACCTGTGGTTGCTACG CTGCCGTTCATCGGCCTGTTCGTCGGCGTGCTGCTATCCTCTGCATTCATTATCTTCATCGGCCAGCCGTACTAC ATCCGCAAGTGGGAGGAAGGTGGCGGTAAGCCTGTGCCGGAGGCGCGTCTGATGCCCATGGCTGTTGGGGGGTTC TTGTTCGCGGGTGGTCTGTTCTGGTTTGGGTGGACGGCTGAGCCTAAGTATTCATGGGGGTTGCCGGTTGTGGCG GCGATGGTGTTTGGATGTGGGTTTTGTATTATCTTTGGGCAGTGTATCAACTTTCTGGTCGATACGTATGGGCCT TATGCGGCGTCGGCGACGGCTTCGAATACTTTCCTGCGGAGTGTGTTGGCTGCTGCATTTCCGCTGTTCTCGCAG CCGATGTTTCGCAATTTGGGGGTTGGGCCGGCCATGTCCATTTTGGGGGGCGTCGCCGCGGCGGCGATCCCGGTG CCGTTTTTGTTCATGATTTACGGGGTCAGGTTGAGGAAGATGTCGAGGTTTGCGCCATTTAAGGGGTAG |
| Gene | >Ani_SJS100_1|g678.t1 ATGACTGTCGTCGACCCTACGGCCCAGCCGCCACCATCTCGACCAGCAGATGCAGAAAAGGGCAAGGCCGGACAT GCAGGCGGCCCCGATCCTAACCTAGTGACATGGGAGGAAAACGACCCCGAAAATCCACATAACTTCTCGACGGCG TACAAATGCTGGATCACGTTTCAGCTGGGTTTATTGGCGTTGAGCGCCAGTCTGGGATCCAGTATTATTTCCCCG GCGGAGACGGAACTCAAGGCTTATTTGAAGATTGGCACGGAAGTTAGTATTCTTCCGGTGTCGCTTTATATGTAT GTAAATCACTGGAATTAAATTATCCGCGAAGGGATAGAAGCTTTTTCTCTCGACAATTATATACTAACAAAGATA CCAGTCTCGGCTTCGCCTTCGGCCCCCTATGCTGGGCGCCCATTTCCGAACTCTTCGGCCGACGATGGTCGATGC TGCCCGCGGTATTCATCCTGGGACTGTTCAGCATCGGCACCGCAACCAGCAAAAACACCGCCTCAGTTCTCATCA CCCGGTACTTCGCGGGCCTGTTCGGCTCCGCACCAGTCAGTAATGTCTCCGCCGCGCTCGGCGACATCTTCCACA TGAAGGCGCGCGGCATCGCCAGCACCTCGTACGCCATCTGCGTCGTCGGCGGCCCAACCATGGGACCCATCATCG GGGCTGCGCTGGTCTCGAATCCGCACCTAGGGTGGCGCTGGACCGAGTACATCGAAGCCATCATCGTGTTCTTCA TCTTCGGTATCACCTTCTTCTGTCTGCCGGAGGTATACGGCCCCGTGCTGCTGCATCGTAAGGCGGTGCGTATGC GCAAGGAGACCGGGAATGACGAACTGTATCATCCGCACGAGCATATCAAGGTGGACGTGCATAGTATCGTCACGA AGCATTTTTCGCGTCCGCTGGTCATGCTTGTTACGGAACCGATGGTTACGGTGATTGCGCTGTATGCGTCGTTTA CGTATGCGTTGCTGTATCTCACCTTGGAGGTGTTCCCTATTGTTTTTGATGATATTCGCCAGTGGAAACCTGTGG TTGCTACGCTGCCGTTCATCGGCCTGTTCGTCGGCGTGCTGCTATCCTCTGCATTCATTATCTTCATCGGCCAGC CGTACTACATCCGCAAGTGGGAGGAAGGTGGCGGTAAGCCTGTGCCGGAGGCGCGTCTGATGCCCATGGCTGTTG GGGGGTTCTTGTTCGCGGGTGGTCTGTTCTGGTTTGGGTGGACGGCTGAGCCTAAGTATTCATGGGGGTTGCCGG TTGTGGCGGCGATGGTGTTTGGATGTGGGTTTTGTATTATCTTTGGGCAGTGTATCAACTTTCTGGTCGATACGT ATGGGCCTTATGCGGCGTCGGCGACGGCTTCGAATACTTTCCTGCGGAGTGTGTTGGCTGCTGCATTTCCGCTGT TCTCGCAGCCGATGTTTCGCAATTTGGGGGTTGGGCCGGCCATGTCCATTTTGGGGGGCGTCGCCGCGGCGGCGA TCCCGGTGCCGTTTTTGTTCATGATTTACGGGGTCAGGTTGAGGAAGATGTCGAGGTTTGCGCCATTTAAGGGGT AG |