© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g674.t1 |
| Gene name | |
| Location | scaffold_002:705690..706488 |
| Strand | - |
| Gene length (bp) | 798 |
| Transcript length (bp) | 666 |
| Coding sequence length (bp) | 666 |
| Protein length (aa) | 222 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 2.8E-38 | 7 | 208 |
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 4.8E-08 | 3 | 115 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 113 | 135 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g674.t1 MRALVIGGTGRCGRLVIDELLRRGHHQVTTLARTPDALGDPRPSLNVIQGTPMNLDDVRAAFKADKPDVVIVTLN APRASDSPFAAPISPPRLMADCNANVVAAMKEFGVRKIVILQAFGVGASWTNLHILLRLLMKTSNMSHQYDDHNE TEREVLASGVDYVFVRPSRLVETDETAIKVWPDDGKGVPMMASTSRISVARYLVDVAEGDEWDNTAPVITN* |
| Coding | >Ani_SJS100_1|g674.t1 ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGCGAGGCCAC CACCAGGTCACTACCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGC ACTCCGATGAATCTAGATGACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAAT GCGCCTCGAGCGAGCGATAGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAAT GTAGTGGCTGCGATGAAAGAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGG ACTAATCTGCACATCCTGCTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAG ACAGAGAGGGAAGTCCTGGCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAA ACCGCCATCAAGGTGTGGCCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCA CGATATTTGGTCGATGTGGCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA |
| Transcript | >Ani_SJS100_1|g674.t1 ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGCGAGGCCAC CACCAGGTCACTACCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGC ACTCCGATGAATCTAGATGACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAAT GCGCCTCGAGCGAGCGATAGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAAT GTAGTGGCTGCGATGAAAGAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGG ACTAATCTGCACATCCTGCTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAG ACAGAGAGGGAAGTCCTGGCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAA ACCGCCATCAAGGTGTGGCCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCA CGATATTTGGTCGATGTGGCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA |
| Gene | >Ani_SJS100_1|g674.t1 ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGCGAGGTAGG CTTCTACTATGTTATACTACCTCAGACACGTTGATGAATATGGCTAACATACCCAAGGCCACCACCAGGTCACTA CCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGTTAGTACACAATGA ATTCTTGCTGCTGCTGCTGCTTGTTGTAATATGTTCCACGGCTGACATGTCCCAGGCACTCCGATGAATCTAGAT GACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAATGCGCCTCGAGCGAGCGAT AGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAATGTAGTGGCTGCGATGAAA GAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGGACTAATCTGCACATCCTG CTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAGACAGAGAGGGAAGTCCTG GCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAAACCGCCATCAAGGTGTGG CCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCACGATATTTGGTCGATGTG GCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA |