Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6686.t1
Gene name
Locationscaffold_042:227270..228629
Strand-
Gene length (bp)1359
Transcript length (bp)1062
Coding sequence length (bp)1062
Protein length (aa) 354

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 47 69 22
3 89 111 22
4 124 146 22
5 166 188 22
6 200 222 22
7 237 259 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6686.t1
MGRFTGDTKDPAVNVSTWFLLVTASLSVIFRLGTKYGSFRTLTNDDYLIVVSLIFCIGQSIAVSMAVANGYGYHF
STLTPERFDNMMKSQYAAALLYIPSLYFSKISLSCFIRNLTPTAKDHRVANVVQISVTVMAVICLLGTAFQCSVP
RTWNYYTGKCMNLIAWHNFTGIMNIVTDTMITSQALYLIARIQTSWKRKFVFASIFLSRVLVILISIVELILVSQ
NDATHDPSFSTWGVTISVETIQCLSIVTACWAQLKPFLNMLKSNGLRIQGVDYRSTNNRSKWSTTRSANRTESKY
TRSGEHELVGMGAGQGNITTVSAARLSDDDSQSSQAGIIREVRTWVVSEEVET*
Coding >Ani_SJS100_1|g6686.t1
ATGGGACGGTTCACTGGAGACACCAAAGATCCGGCCGTCAATGTATCGACATGGTTCCTGCTCGTGACTGCGTCG
CTGAGCGTCATCTTTCGACTGGGGACCAAGTACGGCTCGTTCCGCACGCTCACAAACGATGACTATCTCATAGTT
GTATCGCTGATCTTCTGTATCGGCCAATCCATCGCTGTATCGATGGCTGTCGCAAACGGATATGGATACCACTTC
TCCACGCTCACCCCGGAGCGCTTCGACAACATGATGAAGTCGCAATACGCCGCCGCTCTCCTTTACATCCCTAGT
CTCTATTTCTCGAAGATATCCCTTTCATGTTTCATCCGCAACCTGACGCCGACAGCCAAAGATCATCGCGTCGCC
AACGTGGTGCAAATATCGGTGACCGTTATGGCCGTGATATGTCTACTGGGAACCGCCTTTCAATGCAGCGTACCG
AGGACCTGGAATTACTACACGGGGAAATGCATGAACCTGATAGCATGGCACAACTTTACGGGAATCATGAACATT
GTGACCGACACCATGATCACCTCGCAGGCGCTCTACTTGATCGCGCGCATCCAAACGTCCTGGAAACGCAAGTTC
GTGTTCGCAAGTATCTTTTTATCTCGAGTCCTAGTTATCCTCATCAGCATCGTGGAACTCATCCTAGTCTCTCAA
AACGACGCAACCCATGACCCCTCCTTCTCCACCTGGGGGGTAACCATCAGCGTGGAAACGATCCAATGTCTCAGC
ATCGTGACAGCCTGCTGGGCGCAACTGAAACCATTCCTGAACATGCTCAAATCGAACGGCCTCCGGATCCAAGGC
GTGGACTACCGATCGACGAACAACAGATCAAAATGGTCGACGACACGGTCGGCGAATCGCACAGAGAGCAAGTAT
ACACGCAGTGGAGAGCACGAGCTGGTGGGAATGGGGGCTGGACAGGGGAACATTACGACGGTATCGGCAGCGAGG
TTGTCGGATGATGATAGTCAGTCCAGTCAGGCGGGGATTATTCGGGAGGTGAGGACGTGGGTGGTTAGTGAGGAG
GTGGAGACATGA
Transcript >Ani_SJS100_1|g6686.t1
ATGGGACGGTTCACTGGAGACACCAAAGATCCGGCCGTCAATGTATCGACATGGTTCCTGCTCGTGACTGCGTCG
CTGAGCGTCATCTTTCGACTGGGGACCAAGTACGGCTCGTTCCGCACGCTCACAAACGATGACTATCTCATAGTT
GTATCGCTGATCTTCTGTATCGGCCAATCCATCGCTGTATCGATGGCTGTCGCAAACGGATATGGATACCACTTC
TCCACGCTCACCCCGGAGCGCTTCGACAACATGATGAAGTCGCAATACGCCGCCGCTCTCCTTTACATCCCTAGT
CTCTATTTCTCGAAGATATCCCTTTCATGTTTCATCCGCAACCTGACGCCGACAGCCAAAGATCATCGCGTCGCC
AACGTGGTGCAAATATCGGTGACCGTTATGGCCGTGATATGTCTACTGGGAACCGCCTTTCAATGCAGCGTACCG
AGGACCTGGAATTACTACACGGGGAAATGCATGAACCTGATAGCATGGCACAACTTTACGGGAATCATGAACATT
GTGACCGACACCATGATCACCTCGCAGGCGCTCTACTTGATCGCGCGCATCCAAACGTCCTGGAAACGCAAGTTC
GTGTTCGCAAGTATCTTTTTATCTCGAGTCCTAGTTATCCTCATCAGCATCGTGGAACTCATCCTAGTCTCTCAA
AACGACGCAACCCATGACCCCTCCTTCTCCACCTGGGGGGTAACCATCAGCGTGGAAACGATCCAATGTCTCAGC
ATCGTGACAGCCTGCTGGGCGCAACTGAAACCATTCCTGAACATGCTCAAATCGAACGGCCTCCGGATCCAAGGC
GTGGACTACCGATCGACGAACAACAGATCAAAATGGTCGACGACACGGTCGGCGAATCGCACAGAGAGCAAGTAT
ACACGCAGTGGAGAGCACGAGCTGGTGGGAATGGGGGCTGGACAGGGGAACATTACGACGGTATCGGCAGCGAGG
TTGTCGGATGATGATAGTCAGTCCAGTCAGGCGGGGATTATTCGGGAGGTGAGGACGTGGGTGGTTAGTGAGGAG
GTGGAGACATGA
Gene >Ani_SJS100_1|g6686.t1
ATGGGACGGTTCACTGGAGACACCAAAGATCCGGCCGTCAATGTATCGACATGGTTCCTGCTCGTGACTGCGTCG
CTGAGCGTCATCTTTCGACTGGGGACCAAGTACGGCTCGTTCCGCACGCTCACAAACGATGACTATCTCATAGTT
GTATCGCTGGTATGTCGATCTTCCGCCTAGACCCTCACAAAGCTCCAGCAGGCTAACTATTTGCTCTGGATGGGG
CGCCACAGATCTTCTGTATCGGCCAATCCATCGCTGTATCGATGGCTGTCGCAAACGGATATGGATACCACTTCT
CCACGCTCACCCCGGAGCGCTTCGACAACATGATGAAGGTATGAGCTACACCTGCACCAGTATGAAATATGCCTT
TCCGCAGTCACCTCAACCCCCCGGGACCCTCACTGAAGAACAATCGGTATCAATTCAGTCGCAATACGCCGCCGC
TCTCCTTTACATCCCTAGTCTCTATTTCTCGAAGATATCCCTTTCATGTTTCATCCGCAACCTGACGCCGACAGC
CAAAGATCATCGCGTCGCCAACGTGGTGCAAATATCGGTGACCGTTATGGCCGTGATATGTCTACTGGGAACCGC
CTTTCAATGCAGCGTACCGAGGACCTGGAATTACTACACGGGGAAATGCATGAACCTGGTACTATCTCCCACCAC
TCGCAATATACACCAACAAGAGGGCGAACAACACTAACCAGCCCAACAGATAGCATGGCACAACTTTACGGGAAT
CATGAACATTGTGACCGACACCATGATCACCTCGCAGGCGCTCTACTTGATCGCGCGCATCCAAACGTCCTGGAA
ACGCAAGTTCGTGTTCGCAAGTATCTTTTTATCTCGAGTCCTGTCAGTCCAATCCCCCATTACCCAAATGTATCA
CCCACTAACCAAACCAATCCTCCGAACAGAGTTATCCTCATCAGCATCGTGGAACTCATCCTAGTCTCTCAAAAC
GACGCAACCCATGACCCCTCCTTCTCCACCTGGGGGGTAACCATCAGCGTGGAAACGATCCAATGTCTCAGCATC
GTGACAGCCTGCTGGGCGCAACTGAAACCATTCCTGAACATGCTCAAATCGAACGGCCTCCGGATCCAAGGCGTG
GACTACCGATCGACGAACAACAGATCAAAATGGTCGACGACACGGTCGGCGAATCGCACAGAGAGCAAGTATACA
CGCAGTGGAGAGCACGAGCTGGTGGGAATGGGGGCTGGACAGGGGAACATTACGACGGTATCGGCAGCGAGGTTG
TCGGATGATGATAGTCAGTCCAGTCAGGCGGGGATTATTCGGGAGGTGAGGACGTGGGTGGTTAGTGAGGAGGTG
GAGACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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