Protein ID | Ani_SJS100_1|g6680.t1 |
Gene name | |
Location | scaffold_042:214142..215472 |
Strand | + |
Gene length (bp) | 1330 |
Transcript length (bp) | 1266 |
Coding sequence length (bp) | 1266 |
Protein length (aa) | 422 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00487 | FA_desaturase | Fatty acid desaturase | 5.3E-17 | 65 | 280 |
PF00173 | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | 6.4E-14 | 339 | 404 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006629 | lipid metabolic process | Yes |
GO:0008150 | biological_process | No |
GO:0044238 | primary metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 41 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 36 | 58 | 22 |
2 | 63 | 85 | 22 |
3 | 180 | 202 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6680.t1 MPGETNIPPRRDRHVSKVHIADTPITLRNWHKHVNWLNVTMIVLIPLYGCIQALWTPLRLKTAIWAVAYYFFTAL GVTAGYHRLWAHRSYTATLPLRITLALAAGGSVQGSARWWARLHRSHHRYTDTERDPYSVHKGIFYAHFGWMILK QNPKRFGRTDISDLNADPVVVWQHRHFLKIVVLMGLVVPMLVAGIWGDWWGGFVYAGILRIFFVQQATFCVNSLA HWLGEQPFDDRNSPRDHVVTALATMGEGYHNFHHEFPSDYRNAIRWYQYDPTKWAIWCWGQVGLARDLKMFRENE IEKGMVQQLQKKVDKKRAELDWGTPLSELPVMEWEEFVERARSRALVVVAGVVHDVEDFVKEHPGGRAMIQAGVG KDATAMFNGGVYYHSNAAHNLLSMMRVAVIRGGSEVEIWKRPQKEM* |
Coding | >Ani_SJS100_1|g6680.t1 ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATC ACCCTCCGGAACTGGCATAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC ATCCAAGCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTA GGCGTCACAGCAGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTG GCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTAC ACAGACACGGAGCGGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAG CAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGA CACTTCCTGAAGATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGGGGTGACTGGTGG GGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCT CACTGGCTCGGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATG GGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGAT CCGACCAAGTGGGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAG ATTGAGAAGGGGATGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCG TTGAGTGAGTTACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCT GGGGTGGTGCATGATGTTGAGGACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGG AAGGATGCGACCGCTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATG CGGGTAGCGGTTATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAG |
Transcript | >Ani_SJS100_1|g6680.t1 ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATC ACCCTCCGGAACTGGCATAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC ATCCAAGCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTA GGCGTCACAGCAGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTG GCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTAC ACAGACACGGAGCGGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAG CAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGA CACTTCCTGAAGATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGGGGTGACTGGTGG GGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCT CACTGGCTCGGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATG GGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGAT CCGACCAAGTGGGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAG ATTGAGAAGGGGATGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCG TTGAGTGAGTTACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCT GGGGTGGTGCATGATGTTGAGGACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGG AAGGATGCGACCGCTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATG CGGGTAGCGGTTATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAG |
Gene | >Ani_SJS100_1|g6680.t1 ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATC ACCCTCCGGAACTGGCATAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC ATCCAAGCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTA GGCGTCACAGCAGGTCTGTCCCACCACCACCGTACCCCCCTCTCACATCCCCTCTTCTAACCCATCGTAACCAAC AGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTGGCCCTCGCCGC CGGGGGCTCCGTCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTACACAGACACGGA GCGGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAGCAGAACCCGAA GCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAA GATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGGGGTGACTGGTGGGGCGGGTTCGT GTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGG CGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATGGGTGAGGGGTA TCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAGTG GGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAGATTGAGAAGGG GATGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTT ACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCTGGGGTGGTGCA TGATGTTGAGGACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGGAAGGATGCGAC CGCTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATGCGGGTAGCGGT TATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAG |