© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6680.t1 |
| Gene name | |
| Location | scaffold_042:214142..215472 |
| Strand | + |
| Gene length (bp) | 1330 |
| Transcript length (bp) | 1266 |
| Coding sequence length (bp) | 1266 |
| Protein length (aa) | 422 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00487 | FA_desaturase | Fatty acid desaturase | 5.3E-17 | 65 | 280 |
| PF00173 | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | 6.4E-14 | 339 | 404 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006629 | lipid metabolic process | Yes |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 36 | 58 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 180 | 202 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 6915 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6680.t1 MPGETNIPPRRDRHVSKVHIADTPITLRNWHKHVNWLNVTMIVLIPLYGCIQALWTPLRLKTAIWAVAYYFFTAL GVTAGYHRLWAHRSYTATLPLRITLALAAGGSVQGSARWWARLHRSHHRYTDTERDPYSVHKGIFYAHFGWMILK QNPKRFGRTDISDLNADPVVVWQHRHFLKIVVLMGLVVPMLVAGIWGDWWGGFVYAGILRIFFVQQATFCVNSLA HWLGEQPFDDRNSPRDHVVTALATMGEGYHNFHHEFPSDYRNAIRWYQYDPTKWAIWCWGQVGLARDLKMFRENE IEKGMVQQLQKKVDKKRAELDWGTPLSELPVMEWEEFVERARSRALVVVAGVVHDVEDFVKEHPGGRAMIQAGVG KDATAMFNGGVYYHSNAAHNLLSMMRVAVIRGGSEVEIWKRPQKEM* |
| Coding | >Ani_SJS100_1|g6680.t1 ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATC ACCCTCCGGAACTGGCATAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC ATCCAAGCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTA GGCGTCACAGCAGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTG GCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTAC ACAGACACGGAGCGGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAG CAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGA CACTTCCTGAAGATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGGGGTGACTGGTGG GGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCT CACTGGCTCGGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATG GGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGAT CCGACCAAGTGGGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAG ATTGAGAAGGGGATGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCG TTGAGTGAGTTACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCT GGGGTGGTGCATGATGTTGAGGACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGG AAGGATGCGACCGCTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATG CGGGTAGCGGTTATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAG |
| Transcript | >Ani_SJS100_1|g6680.t1 ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATC ACCCTCCGGAACTGGCATAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC ATCCAAGCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTA GGCGTCACAGCAGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTG GCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTAC ACAGACACGGAGCGGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAG CAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGA CACTTCCTGAAGATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGGGGTGACTGGTGG GGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCT CACTGGCTCGGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATG GGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGAT CCGACCAAGTGGGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAG ATTGAGAAGGGGATGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCG TTGAGTGAGTTACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCT GGGGTGGTGCATGATGTTGAGGACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGG AAGGATGCGACCGCTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATG CGGGTAGCGGTTATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAG |
| Gene | >Ani_SJS100_1|g6680.t1 ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATC ACCCTCCGGAACTGGCATAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC ATCCAAGCTCTCTGGACCCCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTA GGCGTCACAGCAGGTCTGTCCCACCACCACCGTACCCCCCTCTCACATCCCCTCTTCTAACCCATCGTAACCAAC AGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTGGCCCTCGCCGC CGGGGGCTCCGTCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTACACAGACACGGA GCGGGACCCTTACTCCGTACATAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAGCAGAACCCGAA GCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAA GATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGGGGTGACTGGTGGGGCGGGTTCGT GTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGG CGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATGGGTGAGGGGTA TCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAGTG GGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAGATTGAGAAGGG GATGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTT ACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCTGGGGTGGTGCA TGATGTTGAGGACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGGAAGGATGCGAC CGCTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATGCGGGTAGCGGT TATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAG |