© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6676.t1 |
| Gene name | |
| Location | scaffold_042:205614..207344 |
| Strand | + |
| Gene length (bp) | 1730 |
| Transcript length (bp) | 1572 |
| Coding sequence length (bp) | 1572 |
| Protein length (aa) | 524 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 6.1E-51 | 45 | 494 |
| PF00324 | AA_permease | Amino acid permease | 2.0E-19 | 53 | 392 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 73 | 95 | 22 |
| 3 | 124 | 146 | 22 |
| 4 | 167 | 184 | 17 |
| 5 | 199 | 221 | 22 |
| 6 | 259 | 276 | 17 |
| 7 | 296 | 318 | 22 |
| 8 | 338 | 360 | 22 |
| 9 | 431 | 453 | 22 |
| 10 | 466 | 488 | 22 |
| 11 | 493 | 512 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6676.t1 MSPHDRSEEEGVRRPLLADSRGTDGTEPGAESTSALGPKFTRNLGAIEAFGIVISIVIGSGIFTSPGSIDTNVPS PGVALIVWLVGGILAWTGASTMAELGTAIPGEGGVQPYLRYIYGDVFGFLAAWTWIIAVMPATLAILSIVFIESI FSAAGVTDQAGSLSHKLLSILVLLVIGVANSISTKVSTRLNGFSVTTKFIAIAAIVVAGLVVVILQVSGINRDAG SNDWLKHSWFGSRNTWTPDGREIDWSSMHGWESLGYYSTALYGALWAYSGWDKAIYVSAELSAPARQLPLAINTA IPIIILCFLAANAAYYILLPWKIVSTTDSVAVTAITHLLGPACGILAAIVICLVVAGSLLGNSFVAGRMIVAASK LDWFPRFLGVLGHVGMPPDPEPPSQSTPRSDAPINATIMATLLPIPYLLFGNFRALLTFNGLGEYSFFFLTVLGA ILLRFRQPDLHRPYKPFIAIPLIFALVSGFVVVRGAVFAPLQAVILISVWIIGMGFYYLRAYLRRERVTRRSE* |
| Coding | >Ani_SJS100_1|g6676.t1 ATGTCTCCCCACGATCGGTCGGAGGAGGAGGGTGTTCGCCGCCCACTCCTGGCCGATTCCAGAGGGACCGATGGG ACCGAACCCGGGGCGGAGTCTACTTCCGCATTGGGCCCCAAGTTCACCCGCAACCTCGGAGCCATCGAGGCATTC GGCATCGTCATCAGCATCGTGATCGGTAGTGGTATCTTCACTTCACCCGGTTCTATCGACACAAATGTTCCATCC CCTGGAGTCGCGCTTATCGTGTGGCTGGTCGGAGGCATTCTGGCCTGGACCGGTGCTAGCACCATGGCCGAGCTC GGCACTGCTATTCCGGGAGAAGGAGGCGTGCAGCCATATCTTCGATACATCTATGGGGATGTTTTTGGCTTTCTT GCTGCTTGGACTTGGATCATCGCCGTGATGCCTGCAACGCTGGCCATTTTGAGCATCGTGTTCATTGAAAGCATC TTCTCCGCGGCTGGCGTCACTGACCAGGCTGGAAGCCTTTCGCATAAGCTGCTCTCCATTCTTGTATTGTTGGTG ATCGGAGTGGCCAACTCCATCAGTACCAAGGTCAGCACCCGATTGAATGGATTCTCCGTCACGACCAAATTCATC GCCATCGCCGCAATTGTTGTGGCCGGCCTAGTCGTCGTCATCCTGCAAGTTTCGGGAATCAACCGCGATGCTGGG TCCAATGACTGGCTCAAGCACTCTTGGTTTGGATCTAGGAACACTTGGACTCCAGACGGTCGGGAGATCGACTGG AGCTCCATGCACGGATGGGAATCGCTGGGTTACTATTCAACCGCACTCTACGGTGCTCTCTGGGCCTATTCGGGC TGGGATAAGGCTATCTACGTCAGCGCAGAGCTCTCTGCTCCTGCCCGTCAGCTTCCACTGGCCATCAACACTGCC ATTCCCATCATCATTCTTTGCTTCCTTGCCGCTAATGCCGCGTACTACATCCTTCTTCCATGGAAGATCGTTTCA ACTACTGATAGCGTGGCCGTCACCGCAATCACCCATCTTCTAGGACCAGCATGCGGTATCCTTGCTGCCATAGTG ATCTGCCTCGTGGTCGCCGGCTCCCTGCTCGGAAACTCCTTTGTGGCCGGTCGCATGATTGTCGCCGCATCAAAG CTGGATTGGTTTCCGCGGTTCCTGGGCGTGCTCGGACATGTGGGAATGCCTCCTGACCCGGAGCCTCCTTCTCAG TCGACCCCGCGATCGGATGCGCCCATAAATGCCACGATCATGGCCACTCTGCTACCAATCCCGTACCTGCTGTTC GGAAATTTTCGCGCTCTACTCACCTTCAATGGTCTGGGGGAATACTCGTTCTTCTTCTTGACCGTTTTGGGTGCC ATTCTTCTGCGATTCCGGCAGCCTGATCTCCATCGGCCGTACAAACCTTTCATTGCAATTCCGCTGATATTTGCC CTTGTCAGTGGCTTTGTGGTGGTAAGGGGAGCTGTTTTTGCGCCTCTCCAAGCGGTGATTCTGATTTCAGTCTGG ATCATCGGCATGGGGTTCTATTACCTCCGGGCTTACCTTCGAAGGGAAAGGGTGACTAGAAGAAGCGAGTAG |
| Transcript | >Ani_SJS100_1|g6676.t1 ATGTCTCCCCACGATCGGTCGGAGGAGGAGGGTGTTCGCCGCCCACTCCTGGCCGATTCCAGAGGGACCGATGGG ACCGAACCCGGGGCGGAGTCTACTTCCGCATTGGGCCCCAAGTTCACCCGCAACCTCGGAGCCATCGAGGCATTC GGCATCGTCATCAGCATCGTGATCGGTAGTGGTATCTTCACTTCACCCGGTTCTATCGACACAAATGTTCCATCC CCTGGAGTCGCGCTTATCGTGTGGCTGGTCGGAGGCATTCTGGCCTGGACCGGTGCTAGCACCATGGCCGAGCTC GGCACTGCTATTCCGGGAGAAGGAGGCGTGCAGCCATATCTTCGATACATCTATGGGGATGTTTTTGGCTTTCTT GCTGCTTGGACTTGGATCATCGCCGTGATGCCTGCAACGCTGGCCATTTTGAGCATCGTGTTCATTGAAAGCATC TTCTCCGCGGCTGGCGTCACTGACCAGGCTGGAAGCCTTTCGCATAAGCTGCTCTCCATTCTTGTATTGTTGGTG ATCGGAGTGGCCAACTCCATCAGTACCAAGGTCAGCACCCGATTGAATGGATTCTCCGTCACGACCAAATTCATC GCCATCGCCGCAATTGTTGTGGCCGGCCTAGTCGTCGTCATCCTGCAAGTTTCGGGAATCAACCGCGATGCTGGG TCCAATGACTGGCTCAAGCACTCTTGGTTTGGATCTAGGAACACTTGGACTCCAGACGGTCGGGAGATCGACTGG AGCTCCATGCACGGATGGGAATCGCTGGGTTACTATTCAACCGCACTCTACGGTGCTCTCTGGGCCTATTCGGGC TGGGATAAGGCTATCTACGTCAGCGCAGAGCTCTCTGCTCCTGCCCGTCAGCTTCCACTGGCCATCAACACTGCC ATTCCCATCATCATTCTTTGCTTCCTTGCCGCTAATGCCGCGTACTACATCCTTCTTCCATGGAAGATCGTTTCA ACTACTGATAGCGTGGCCGTCACCGCAATCACCCATCTTCTAGGACCAGCATGCGGTATCCTTGCTGCCATAGTG ATCTGCCTCGTGGTCGCCGGCTCCCTGCTCGGAAACTCCTTTGTGGCCGGTCGCATGATTGTCGCCGCATCAAAG CTGGATTGGTTTCCGCGGTTCCTGGGCGTGCTCGGACATGTGGGAATGCCTCCTGACCCGGAGCCTCCTTCTCAG TCGACCCCGCGATCGGATGCGCCCATAAATGCCACGATCATGGCCACTCTGCTACCAATCCCGTACCTGCTGTTC GGAAATTTTCGCGCTCTACTCACCTTCAATGGTCTGGGGGAATACTCGTTCTTCTTCTTGACCGTTTTGGGTGCC ATTCTTCTGCGATTCCGGCAGCCTGATCTCCATCGGCCGTACAAACCTTTCATTGCAATTCCGCTGATATTTGCC CTTGTCAGTGGCTTTGTGGTGGTAAGGGGAGCTGTTTTTGCGCCTCTCCAAGCGGTGATTCTGATTTCAGTCTGG ATCATCGGCATGGGGTTCTATTACCTCCGGGCTTACCTTCGAAGGGAAAGGGTGACTAGAAGAAGCGAGTAG |
| Gene | >Ani_SJS100_1|g6676.t1 ATGTCTCCCCACGATCGGTCGGAGGAGGAGGGTGTTCGCCGCCCACTCCTGGCCGATTCCAGAGGGACCGATGGG ACCGAACCCGGGGCGGAGTCTACTTCCGCATTGGGCCCCAAGTTCACCCGCAACCTCGGAGCCATCGAGGCATTC GGCATCGTCATCAGCATCGTGATCGGTAGTGGTATCTTCACTTCACCCGGTTCTATCGACACAAATGTTCCATCC CCTGGAGTCGCGCTTATCGTGTGGCTGGTCGGAGGCATTCTGGCCTGGACCGGTGCTAGCACCATGGCCGAGCTC GGCACTGCTATTCCGGGAGAAGGTCGGTTCACTCTGCTGCCATCAGATATATCGACAGGATTGACTGTACAACAG GAGGCGTGCAGCCATATCTTCGATACATCTATGGGGATGTTTTTGGCTTTCTTGCTGCTTGGACTTGGATCATCG CCGTGATGCCTGCAACGCTGGCCATTTTGAGCATCGTGTTCATTGAAAGCATCTTCTCCGCGGCTGGCGTCACTG ACCAGGCTGGAAGCCTTTCGCATAAGCTGCTCTCCATTCTTGTATTGTTGGTGATCGGAGTGGCCAACTCCATCA GTACCAAGGTCAGCACCCGATTGAATGGATTCTCCGTCACGACCAAATTCATCGCCATCGCCGCAATTGTTGTGG CCGGCCTAGTCGTCGTCATCCTGCAAGTTTCGGGAATCAACCGCGATGCTGGGTCCAATGACTGGCTCAAGCACT CTTGGTTTGGATCTAGGAACACTTGGACTCCAGACGGTCGGGAGATCGACTGGAGCTCCATGCACGGATGGGAAT CGCTGGGTTACTATTCAACCGCACTCTACGGTGCTCTCTGGGCCTATTCGGGCTGGGATAAGGTGAGCATATAGC CTCTTTCTGATATAATTCGTCAAAACGCTCACCATGTTTTGGCAGGCTATCTACGTCAGCGCAGAGCTCTCTGCT CCTGCCCGTCAGCTTCCACTGGCCATCAACACTGCCATTCCCATCATCATTCTTTGCTTCCTTGCCGCTAATGCC GCGTACTACATCCTTCTTCCATGGAAGATCGTTTCAACTACTGATAGCGTGGCCGTCGTACGTAAAACACCTTCC TATTGATGGCTTGTGCTAATAGGATACAGACCGCAATCACCCATCTTCTAGGACCAGCATGCGGTATCCTTGCTG CCATAGTGATCTGCCTCGTGGTCGCCGGCTCCCTGCTCGGAAACTCCTTTGTGGCCGGTCGCATGATTGTCGCCG CATCAAAGCTGGATTGGTTTCCGCGGTTCCTGGGCGTGCTCGGACATGTGGGAATGCCTCCTGACCCGGAGCCTC CTTCTCAGTCGACCCCGCGATCGGATGCGCCCATAAATGCCACGATCATGGCCACTCTGCTACCAATCCCGTACC TGCTGTTCGGAAATTTTCGCGCTCTACTCACCTTCAATGGTCTGGGGGAATACTCGTTCTTCTTCTTGACCGTTT TGGGTGCCATTCTTCTGCGATTCCGGCAGCCTGATCTCCATCGGCCGTACAAACCTTTCATTGCAATTCCGCTGA TATTTGCCCTTGTCAGTGGCTTTGTGGTGGTAAGGGGAGCTGTTTTTGCGCCTCTCCAAGCGGTGATTCTGATTT CAGTCTGGATCATCGGCATGGGGTTCTATTACCTCCGGGCTTACCTTCGAAGGGAAAGGGTGACTAGAAGAAGCG AGTAG |