Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6668.t1
Gene name
Locationscaffold_042:183798..184725
Strand+
Gene length (bp)927
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13517 FG-GAP_3 FG-GAP-like repeat 4.0E-08 109 175

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6668.t1
MQTKPLSIKAIWHLVLLLLATSATAAPYQTRILETGTTFVSPDPYGPWSLTPSFANKPGPDLGYIKTSNTGTGKV
EVHLASRASNYQTRTLELGTTFWPEDNGVWQLIDADGDGRDDLVYIKTRNTGSGRVEVHIASAASNFQTRIKEVG
TTFLPEDNGTWQMADFDGDGILDLIYIKTRNTGTGRVEVHVTSGASNYQTRVQEVGTTFLPEDNGTWQMADFGGD
GILDLIYIKTRNTGAGRVEVHVASGASTYQTRVQEVGSTFFPEDNGFWQMIDFDKDGVLDLAYIKTQNTGTGRIE
VHVATGRN*
Coding >Ani_SJS100_1|g6668.t1
ATGCAGACCAAACCCCTTTCAATAAAAGCCATCTGGCATCTCGTTCTTCTGCTGTTGGCTACCTCGGCAACAGCA
GCCCCATACCAAACCCGTATCCTCGAGACCGGGACCACCTTTGTCTCTCCAGACCCTTACGGCCCATGGTCCTTG
ACTCCCTCCTTTGCCAACAAACCGGGGCCAGACCTGGGCTACATCAAAACCAGTAACACTGGCACCGGCAAGGTG
GAAGTCCACCTTGCCTCCAGGGCTTCCAACTACCAGACCCGCACGCTGGAGCTTGGGACGACCTTCTGGCCTGAA
GACAATGGCGTCTGGCAGCTGATCGACGCAGACGGTGACGGTCGAGATGACCTCGTCTACATCAAGACCCGGAAC
ACTGGCAGCGGCCGAGTGGAAGTGCACATTGCCTCGGCGGCGTCCAACTTCCAGACCCGTATCAAGGAAGTCGGC
ACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGATGGCCGATTTTGACGGCGATGGCATCCTCGACCTGATC
TACATCAAGACTCGGAATACCGGGACGGGACGGGTGGAGGTGCATGTCACCTCTGGCGCATCCAACTACCAGACT
CGCGTGCAGGAAGTCGGCACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGATGGCCGATTTTGGCGGTGAT
GGCATCCTCGACCTCATCTATATCAAGACTCGGAATACCGGGGCCGGACGGGTGGAGGTCCATGTTGCGTCGGGG
GCGTCGACCTATCAGACCCGTGTCCAGGAGGTGGGCAGCACGTTCTTTCCCGAGGACAATGGGTTTTGGCAGATG
ATTGATTTCGATAAGGATGGAGTGCTAGATTTGGCGTATATCAAGACGCAGAATACGGGGACCGGACGAATTGAG
GTCCACGTTGCAACAGGCAGAAACTGA
Transcript >Ani_SJS100_1|g6668.t1
ATGCAGACCAAACCCCTTTCAATAAAAGCCATCTGGCATCTCGTTCTTCTGCTGTTGGCTACCTCGGCAACAGCA
GCCCCATACCAAACCCGTATCCTCGAGACCGGGACCACCTTTGTCTCTCCAGACCCTTACGGCCCATGGTCCTTG
ACTCCCTCCTTTGCCAACAAACCGGGGCCAGACCTGGGCTACATCAAAACCAGTAACACTGGCACCGGCAAGGTG
GAAGTCCACCTTGCCTCCAGGGCTTCCAACTACCAGACCCGCACGCTGGAGCTTGGGACGACCTTCTGGCCTGAA
GACAATGGCGTCTGGCAGCTGATCGACGCAGACGGTGACGGTCGAGATGACCTCGTCTACATCAAGACCCGGAAC
ACTGGCAGCGGCCGAGTGGAAGTGCACATTGCCTCGGCGGCGTCCAACTTCCAGACCCGTATCAAGGAAGTCGGC
ACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGATGGCCGATTTTGACGGCGATGGCATCCTCGACCTGATC
TACATCAAGACTCGGAATACCGGGACGGGACGGGTGGAGGTGCATGTCACCTCTGGCGCATCCAACTACCAGACT
CGCGTGCAGGAAGTCGGCACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGATGGCCGATTTTGGCGGTGAT
GGCATCCTCGACCTCATCTATATCAAGACTCGGAATACCGGGGCCGGACGGGTGGAGGTCCATGTTGCGTCGGGG
GCGTCGACCTATCAGACCCGTGTCCAGGAGGTGGGCAGCACGTTCTTTCCCGAGGACAATGGGTTTTGGCAGATG
ATTGATTTCGATAAGGATGGAGTGCTAGATTTGGCGTATATCAAGACGCAGAATACGGGGACCGGACGAATTGAG
GTCCACGTTGCAACAGGCAGAAACTGA
Gene >Ani_SJS100_1|g6668.t1
ATGCAGACCAAACCCCTTTCAATAAAAGCCATCTGGCATCTCGTTCTTCTGCTGTTGGCTACCTCGGCAACAGCA
GCCCCATACCAAACCCGTATCCTCGAGACCGGGACCACCTTTGTCTCTCCAGACCCTTACGGCCCATGGTCCTTG
ACTCCCTCCTTTGCCAACAAACCGGGGCCAGACCTGGGCTACATCAAAACCAGTAACACTGGCACCGGCAAGGTG
GAAGTCCACCTTGCCTCCAGGGCTTCCAACTACCAGACCCGCACGCTGGAGCTTGGGACGACCTTCTGGCCTGAA
GACAATGGCGTCTGGCAGCTGATCGACGCAGACGGTGACGGTCGAGATGACCTCGTCTACATCAAGACCCGGAAC
ACTGGCAGCGGCCGAGTGGAAGTGCACATTGCCTCGGCGGCGTCCAACTTCCAGACCCGTATCAAGGAAGTCGGC
ACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGATGGCCGATTTTGACGGCGATGGCATCCTCGACCTGATC
TACATCAAGACTCGGAATACCGGGACGGGACGGGTGGAGGTGCATGTCACCTCTGGCGCATCCAACTACCAGACT
CGCGTGCAGGAAGTCGGCACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGATGGCCGATTTTGGCGGTGAT
GGCATCCTCGACCTCATCTATATCAAGACTCGGAATACCGGGGCCGGACGGGTGGAGGTCCATGTTGCGTCGGGG
GCGTCGACCTATCAGACCCGTGTCCAGGAGGTGGGCAGCACGTTCTTTCCCGAGGACAATGGGTTTTGGCAGATG
ATTGATTTCGATAAGGATGGAGTGCTAGATTTGGCGTATATCAAGACGCAGAATACGGGGACCGGACGAATTGAG
GTCCACGTTGCAACAGGCAGAAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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