Protein ID | Ani_SJS100_1|g6643.t1 |
Gene name | |
Location | scaffold_042:115410..117525 |
Strand | - |
Gene length (bp) | 2115 |
Transcript length (bp) | 2115 |
Coding sequence length (bp) | 2115 |
Protein length (aa) | 705 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 6.7E-13 | 103 | 197 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.9E-05 | 138 | 190 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 4.2E-06 | 368 | 422 |
PF12937 | F-box-like | F-box-like | 6.6E-06 | 5 | 39 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6643.t1 MACLTDLPNELLLDIVSYIEYNLDLAALSQTNRRIYHLTSSLVDQKINHMFKNSRLYVNESRAMQRAAANGNVDC VRRLFRAGIPARPDIHYDRWKPSDPATVAAMYGHANVVRLFLDAGVDPNVITSHQSLCARGNLLTIAIQQGHESV VRLLLEHGVKLVFTKEDGDINQPLSVATEFGHYELVKLLLEHGCNPLTPDYRQDGKDETSAFFRAGARSLPILQL FLEPNIPKDYFSDPKYNSQELVLKVLEWGDIPLARFLLDHGAELAIPNYDSSEPTRVVPLDDVLYRVGCASGQYS EKADFLLQKFNVDNIIKDGNFSAVVCLAAGAALGGNVGLLDRVLEVDWVHTRKVIQPQDWKDRLTLYLVDAVRWG HLEVARLLLDHGADPNGPAPDGEDSTFTRPVYTAVEKGHTKLVALLLDRGADPNPEDRGGLFLFATSCCLHQVVR QTRLDIVQLLIDRKIHVPEVSSGLDPMTSLVCSGAKVFQLAVQHMNLKLKVGDIWHMQAFQVAVKTGDIPIITEF LEAGFKPNNWSWLLPNAADHFDPDVAEQAVDLLLKYGADIDVQSHETSRPNLYSFNSSCLAVRKDRVIKLLLKKG ANPFRVDWSGKHVFIAAAAAGEIHSVKGVLEYIEETGIPFGEVRSMVEEAARCATSAAEFAVPLAQKGLLSTSRA FEGPFEKARNITRVEEYLWRWYWRRVYPC* |
Coding | >Ani_SJS100_1|g6643.t1 ATGGCCTGTCTTACTGACCTGCCAAACGAGCTCCTGCTGGACATAGTAAGCTACATCGAATACAACCTCGATCTG GCAGCACTGTCCCAGACCAACCGTCGAATCTACCATCTTACGAGTTCGCTCGTGGACCAAAAAATCAATCATATG TTTAAAAATAGCCGCCTATATGTCAACGAAAGCCGTGCAATGCAACGAGCAGCTGCAAATGGAAACGTGGACTGT GTCCGCAGGTTGTTTCGAGCCGGGATCCCCGCGCGCCCCGACATACACTATGACCGCTGGAAGCCCAGTGATCCG GCTACTGTTGCGGCCATGTACGGACATGCAAATGTTGTTCGGCTGTTCTTGGATGCTGGAGTCGATCCAAATGTT ATAACATCCCATCAAAGTTTATGTGCCCGTGGTAATCTTTTAACCATCGCCATCCAGCAAGGCCATGAATCGGTT GTTCGACTACTGCTGGAACATGGGGTAAAGCTGGTCTTTACCAAGGAAGACGGGGATATAAACCAGCCCCTATCC GTTGCAACGGAGTTCGGTCACTACGAGCTGGTGAAGCTGCTTCTAGAACATGGGTGCAATCCCCTGACACCCGAT TACCGACAGGATGGTAAAGATGAAACATCGGCTTTCTTCAGAGCTGGCGCTCGGAGTCTGCCTATTCTGCAGCTG TTCCTGGAGCCCAATATACCAAAGGACTACTTCTCTGATCCTAAGTACAACTCTCAAGAGTTGGTATTGAAGGTT CTTGAGTGGGGAGATATACCGCTGGCCAGGTTCCTTTTGGATCACGGCGCCGAGCTTGCCATACCAAATTACGAC TCATCGGAACCTACTCGCGTCGTTCCACTTGATGACGTTCTGTATCGCGTCGGCTGTGCGTCTGGCCAGTATTCT GAAAAAGCTGATTTTCTCCTCCAAAAATTCAATGTAGATAACATCATCAAAGACGGGAACTTTTCCGCTGTTGTT TGTCTTGCTGCTGGTGCGGCTCTCGGAGGCAATGTGGGACTGCTTGACCGTGTGTTAGAGGTTGATTGGGTACAC ACACGCAAAGTCATTCAGCCACAGGACTGGAAAGATCGCTTAACCTTGTACCTAGTCGATGCAGTCCGCTGGGGT CATCTTGAAGTTGCCAGACTGTTGCTTGATCACGGTGCAGATCCCAACGGCCCAGCCCCAGACGGCGAAGACTCA ACATTTACCAGGCCTGTATACACTGCAGTGGAGAAGGGACACACAAAGCTTGTCGCACTACTGCTTGATCGGGGA GCCGACCCCAACCCAGAAGACCGTGGTGGTCTGTTCTTGTTTGCCACTAGTTGTTGCTTACATCAGGTAGTGCGG CAGACACGTTTGGATATTGTCCAGCTTCTGATTGACAGAAAGATCCATGTGCCGGAGGTGTCAAGTGGCTTAGAC CCAATGACATCTCTGGTCTGTTCGGGAGCTAAAGTATTCCAGCTGGCTGTACAGCATATGAACCTCAAACTTAAA GTAGGTGACATCTGGCATATGCAGGCCTTTCAGGTCGCAGTGAAGACTGGAGACATTCCAATTATCACAGAATTT CTCGAGGCAGGGTTTAAACCAAATAATTGGTCCTGGCTTCTGCCCAACGCGGCAGATCATTTTGACCCAGATGTT GCCGAGCAGGCCGTTGATCTGTTGCTCAAGTACGGTGCAGATATTGACGTACAGAGTCATGAAACGAGCAGGCCA AATCTTTACAGCTTTAATTCGTCCTGTCTAGCAGTACGCAAAGACAGAGTCATTAAGCTGCTCTTGAAGAAAGGC GCCAATCCTTTCAGGGTTGACTGGTCCGGAAAACACGTTTTCATAGCGGCAGCAGCGGCAGGCGAGATTCATTCT GTGAAAGGCGTATTGGAGTACATTGAGGAGACAGGTATCCCATTCGGTGAGGTGAGATCCATGGTTGAGGAAGCC GCGCGATGTGCAACCAGTGCTGCGGAGTTTGCGGTACCTTTAGCTCAAAAAGGCCTACTATCGACTAGCAGAGCA TTTGAAGGTCCCTTCGAGAAAGCTAGGAATATTACTAGAGTGGAGGAGTACTTATGGCGTTGGTACTGGCGCAGA GTCTATCCTTGTTAG |
Transcript | >Ani_SJS100_1|g6643.t1 ATGGCCTGTCTTACTGACCTGCCAAACGAGCTCCTGCTGGACATAGTAAGCTACATCGAATACAACCTCGATCTG GCAGCACTGTCCCAGACCAACCGTCGAATCTACCATCTTACGAGTTCGCTCGTGGACCAAAAAATCAATCATATG TTTAAAAATAGCCGCCTATATGTCAACGAAAGCCGTGCAATGCAACGAGCAGCTGCAAATGGAAACGTGGACTGT GTCCGCAGGTTGTTTCGAGCCGGGATCCCCGCGCGCCCCGACATACACTATGACCGCTGGAAGCCCAGTGATCCG GCTACTGTTGCGGCCATGTACGGACATGCAAATGTTGTTCGGCTGTTCTTGGATGCTGGAGTCGATCCAAATGTT ATAACATCCCATCAAAGTTTATGTGCCCGTGGTAATCTTTTAACCATCGCCATCCAGCAAGGCCATGAATCGGTT GTTCGACTACTGCTGGAACATGGGGTAAAGCTGGTCTTTACCAAGGAAGACGGGGATATAAACCAGCCCCTATCC GTTGCAACGGAGTTCGGTCACTACGAGCTGGTGAAGCTGCTTCTAGAACATGGGTGCAATCCCCTGACACCCGAT TACCGACAGGATGGTAAAGATGAAACATCGGCTTTCTTCAGAGCTGGCGCTCGGAGTCTGCCTATTCTGCAGCTG TTCCTGGAGCCCAATATACCAAAGGACTACTTCTCTGATCCTAAGTACAACTCTCAAGAGTTGGTATTGAAGGTT CTTGAGTGGGGAGATATACCGCTGGCCAGGTTCCTTTTGGATCACGGCGCCGAGCTTGCCATACCAAATTACGAC TCATCGGAACCTACTCGCGTCGTTCCACTTGATGACGTTCTGTATCGCGTCGGCTGTGCGTCTGGCCAGTATTCT GAAAAAGCTGATTTTCTCCTCCAAAAATTCAATGTAGATAACATCATCAAAGACGGGAACTTTTCCGCTGTTGTT TGTCTTGCTGCTGGTGCGGCTCTCGGAGGCAATGTGGGACTGCTTGACCGTGTGTTAGAGGTTGATTGGGTACAC ACACGCAAAGTCATTCAGCCACAGGACTGGAAAGATCGCTTAACCTTGTACCTAGTCGATGCAGTCCGCTGGGGT CATCTTGAAGTTGCCAGACTGTTGCTTGATCACGGTGCAGATCCCAACGGCCCAGCCCCAGACGGCGAAGACTCA ACATTTACCAGGCCTGTATACACTGCAGTGGAGAAGGGACACACAAAGCTTGTCGCACTACTGCTTGATCGGGGA GCCGACCCCAACCCAGAAGACCGTGGTGGTCTGTTCTTGTTTGCCACTAGTTGTTGCTTACATCAGGTAGTGCGG CAGACACGTTTGGATATTGTCCAGCTTCTGATTGACAGAAAGATCCATGTGCCGGAGGTGTCAAGTGGCTTAGAC CCAATGACATCTCTGGTCTGTTCGGGAGCTAAAGTATTCCAGCTGGCTGTACAGCATATGAACCTCAAACTTAAA GTAGGTGACATCTGGCATATGCAGGCCTTTCAGGTCGCAGTGAAGACTGGAGACATTCCAATTATCACAGAATTT CTCGAGGCAGGGTTTAAACCAAATAATTGGTCCTGGCTTCTGCCCAACGCGGCAGATCATTTTGACCCAGATGTT GCCGAGCAGGCCGTTGATCTGTTGCTCAAGTACGGTGCAGATATTGACGTACAGAGTCATGAAACGAGCAGGCCA AATCTTTACAGCTTTAATTCGTCCTGTCTAGCAGTACGCAAAGACAGAGTCATTAAGCTGCTCTTGAAGAAAGGC GCCAATCCTTTCAGGGTTGACTGGTCCGGAAAACACGTTTTCATAGCGGCAGCAGCGGCAGGCGAGATTCATTCT GTGAAAGGCGTATTGGAGTACATTGAGGAGACAGGTATCCCATTCGGTGAGGTGAGATCCATGGTTGAGGAAGCC GCGCGATGTGCAACCAGTGCTGCGGAGTTTGCGGTACCTTTAGCTCAAAAAGGCCTACTATCGACTAGCAGAGCA TTTGAAGGTCCCTTCGAGAAAGCTAGGAATATTACTAGAGTGGAGGAGTACTTATGGCGTTGGTACTGGCGCAGA GTCTATCCTTGTTAG |
Gene | >Ani_SJS100_1|g6643.t1 ATGGCCTGTCTTACTGACCTGCCAAACGAGCTCCTGCTGGACATAGTAAGCTACATCGAATACAACCTCGATCTG GCAGCACTGTCCCAGACCAACCGTCGAATCTACCATCTTACGAGTTCGCTCGTGGACCAAAAAATCAATCATATG TTTAAAAATAGCCGCCTATATGTCAACGAAAGCCGTGCAATGCAACGAGCAGCTGCAAATGGAAACGTGGACTGT GTCCGCAGGTTGTTTCGAGCCGGGATCCCCGCGCGCCCCGACATACACTATGACCGCTGGAAGCCCAGTGATCCG GCTACTGTTGCGGCCATGTACGGACATGCAAATGTTGTTCGGCTGTTCTTGGATGCTGGAGTCGATCCAAATGTT ATAACATCCCATCAAAGTTTATGTGCCCGTGGTAATCTTTTAACCATCGCCATCCAGCAAGGCCATGAATCGGTT GTTCGACTACTGCTGGAACATGGGGTAAAGCTGGTCTTTACCAAGGAAGACGGGGATATAAACCAGCCCCTATCC GTTGCAACGGAGTTCGGTCACTACGAGCTGGTGAAGCTGCTTCTAGAACATGGGTGCAATCCCCTGACACCCGAT TACCGACAGGATGGTAAAGATGAAACATCGGCTTTCTTCAGAGCTGGCGCTCGGAGTCTGCCTATTCTGCAGCTG TTCCTGGAGCCCAATATACCAAAGGACTACTTCTCTGATCCTAAGTACAACTCTCAAGAGTTGGTATTGAAGGTT CTTGAGTGGGGAGATATACCGCTGGCCAGGTTCCTTTTGGATCACGGCGCCGAGCTTGCCATACCAAATTACGAC TCATCGGAACCTACTCGCGTCGTTCCACTTGATGACGTTCTGTATCGCGTCGGCTGTGCGTCTGGCCAGTATTCT GAAAAAGCTGATTTTCTCCTCCAAAAATTCAATGTAGATAACATCATCAAAGACGGGAACTTTTCCGCTGTTGTT TGTCTTGCTGCTGGTGCGGCTCTCGGAGGCAATGTGGGACTGCTTGACCGTGTGTTAGAGGTTGATTGGGTACAC ACACGCAAAGTCATTCAGCCACAGGACTGGAAAGATCGCTTAACCTTGTACCTAGTCGATGCAGTCCGCTGGGGT CATCTTGAAGTTGCCAGACTGTTGCTTGATCACGGTGCAGATCCCAACGGCCCAGCCCCAGACGGCGAAGACTCA ACATTTACCAGGCCTGTATACACTGCAGTGGAGAAGGGACACACAAAGCTTGTCGCACTACTGCTTGATCGGGGA GCCGACCCCAACCCAGAAGACCGTGGTGGTCTGTTCTTGTTTGCCACTAGTTGTTGCTTACATCAGGTAGTGCGG CAGACACGTTTGGATATTGTCCAGCTTCTGATTGACAGAAAGATCCATGTGCCGGAGGTGTCAAGTGGCTTAGAC CCAATGACATCTCTGGTCTGTTCGGGAGCTAAAGTATTCCAGCTGGCTGTACAGCATATGAACCTCAAACTTAAA GTAGGTGACATCTGGCATATGCAGGCCTTTCAGGTCGCAGTGAAGACTGGAGACATTCCAATTATCACAGAATTT CTCGAGGCAGGGTTTAAACCAAATAATTGGTCCTGGCTTCTGCCCAACGCGGCAGATCATTTTGACCCAGATGTT GCCGAGCAGGCCGTTGATCTGTTGCTCAAGTACGGTGCAGATATTGACGTACAGAGTCATGAAACGAGCAGGCCA AATCTTTACAGCTTTAATTCGTCCTGTCTAGCAGTACGCAAAGACAGAGTCATTAAGCTGCTCTTGAAGAAAGGC GCCAATCCTTTCAGGGTTGACTGGTCCGGAAAACACGTTTTCATAGCGGCAGCAGCGGCAGGCGAGATTCATTCT GTGAAAGGCGTATTGGAGTACATTGAGGAGACAGGTATCCCATTCGGTGAGGTGAGATCCATGGTTGAGGAAGCC GCGCGATGTGCAACCAGTGCTGCGGAGTTTGCGGTACCTTTAGCTCAAAAAGGCCTACTATCGACTAGCAGAGCA TTTGAAGGTCCCTTCGAGAAAGCTAGGAATATTACTAGAGTGGAGGAGTACTTATGGCGTTGGTACTGGCGCAGA GTCTATCCTTGTTAG |