© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g6621.t1 |
| Gene name | |
| Location | scaffold_042:48504..50217 |
| Strand | + |
| Gene length (bp) | 1713 |
| Transcript length (bp) | 1470 |
| Coding sequence length (bp) | 1470 |
| Protein length (aa) | 490 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.6E-28 | 33 | 398 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 37 | 17 |
| 2 | 65 | 87 | 22 |
| 3 | 92 | 114 | 22 |
| 4 | 119 | 141 | 22 |
| 5 | 154 | 173 | 19 |
| 6 | 188 | 210 | 22 |
| 7 | 263 | 285 | 22 |
| 8 | 300 | 317 | 17 |
| 9 | 324 | 346 | 22 |
| 10 | 351 | 373 | 22 |
| 11 | 386 | 408 | 22 |
| 12 | 419 | 441 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6621.t1 MKFPRITWFSPDDSPAERRLLFKLDLLIVPYAFLAYWTKYIDQANINNAYVSGMEQSLNLKGNDLVNLQTIYTVG AVLGQLPFAYLFTKYPISWLIPGMDLLWGVFTLLQYRATSYEEMMAYRFLVGWFEAAFFPGMHYIFGSWYQSHEI ARRGGFFYLGLTLGTLTASFIQAGASAQLDGVNGLAGWRWMYIICAVITIPVGILGFIVLPGTPDKPNRIVLSKS DIQLVRTRLQKAGHGVQESNVSWRTCVRVLRNWKFWALLLVDIFFWNACVQTNTGGYLLWLKSLNRYSTSKVNEL FAIAPGLGMFYTLLVCFASDLVLGPAWAITLAHVWNIIGLVIQVIWDVPESALWFAFSTMYSSVAMSSVLMGWIN SEIRHSPDERAVILIVLNTIAQSTTAWTPLLVFKTVEGPRFTKGYSFVLACAICLIASSHITKYFISKEDRAISA TDEDSRASRDEPESGSAVVQVARPKTDYRYTDEEGMDAK* |
| Coding | >Ani_SJS100_1|g6621.t1 ATGAAATTTCCCAGGATAACATGGTTCTCGCCTGACGACTCCCCAGCGGAACGACGTCTCCTCTTCAAACTCGAT CTCCTCATCGTTCCTTATGCTTTTCTCGCTTACTGGACCAAATATATTGACCAGGCAAATATTAACAATGCCTAC GTCTCTGGAATGGAACAATCCCTTAACCTCAAAGGGAATGACCTCGTCAACCTTCAAACTATCTACACCGTTGGC GCTGTCCTAGGTCAACTCCCATTTGCTTACCTGTTCACCAAATACCCCATCTCGTGGCTCATCCCCGGGATGGAT CTGCTCTGGGGGGTCTTTACTTTGCTGCAATACCGGGCTACTTCGTATGAGGAAATGATGGCATATCGATTCTTG GTGGGATGGTTCGAGGCTGCATTCTTCCCAGGGATGCATTACATATTCGGCTCATGGTACCAAAGCCACGAAATC GCCCGACGCGGAGGCTTCTTCTACCTCGGCCTGACGCTGGGCACCCTAACAGCAAGCTTCATCCAAGCTGGCGCA TCCGCGCAACTAGACGGAGTAAACGGCCTAGCCGGATGGCGGTGGATGTACATCATCTGCGCGGTGATCACCATC CCCGTCGGCATCCTGGGATTCATAGTCCTCCCCGGAACGCCAGACAAACCGAACCGAATTGTGCTAAGCAAATCC GACATCCAACTCGTAAGGACTCGACTCCAAAAAGCCGGACACGGGGTCCAAGAATCCAACGTCTCATGGAGAACT TGTGTACGGGTGCTACGGAACTGGAAGTTCTGGGCGTTGTTGTTGGTGGACATTTTCTTTTGGAACGCGTGCGTG CAAACCAACACGGGTGGGTACCTTCTCTGGTTGAAGAGTCTGAATCGGTACTCGACTAGCAAGGTGAATGAGCTA TTTGCGATCGCGCCCGGGCTGGGGATGTTTTACACCCTGCTTGTGTGCTTCGCATCAGATTTGGTCCTGGGTCCG GCGTGGGCTATTACGCTTGCGCATGTGTGGAATATCATTGGCTTGGTGATTCAGGTTATCTGGGATGTGCCGGAG TCGGCGCTGTGGTTCGCTTTCTCGACGATGTATTCGTCTGTGGCCATGTCCAGTGTGCTGATGGGCTGGATCAAC AGCGAGATACGGCATTCGCCTGACGAGCGGGCAGTTATCTTGATTGTGTTAAACACTATTGCACAGTCTACGACG GCGTGGACGCCGCTATTGGTTTTCAAGACGGTCGAGGGGCCGAGGTTCACGAAGGGCTATTCATTTGTGCTTGCC TGTGCGATCTGCTTGATTGCATCGTCGCACATTACGAAGTACTTCATTTCAAAAGAGGATCGCGCGATATCAGCT ACGGATGAGGACTCGAGGGCCTCTCGAGACGAGCCAGAGTCTGGATCTGCTGTCGTGCAGGTTGCTCGACCTAAG ACTGACTACAGATACACTGATGAGGAAGGGATGGACGCCAAGTGA |
| Transcript | >Ani_SJS100_1|g6621.t1 ATGAAATTTCCCAGGATAACATGGTTCTCGCCTGACGACTCCCCAGCGGAACGACGTCTCCTCTTCAAACTCGAT CTCCTCATCGTTCCTTATGCTTTTCTCGCTTACTGGACCAAATATATTGACCAGGCAAATATTAACAATGCCTAC GTCTCTGGAATGGAACAATCCCTTAACCTCAAAGGGAATGACCTCGTCAACCTTCAAACTATCTACACCGTTGGC GCTGTCCTAGGTCAACTCCCATTTGCTTACCTGTTCACCAAATACCCCATCTCGTGGCTCATCCCCGGGATGGAT CTGCTCTGGGGGGTCTTTACTTTGCTGCAATACCGGGCTACTTCGTATGAGGAAATGATGGCATATCGATTCTTG GTGGGATGGTTCGAGGCTGCATTCTTCCCAGGGATGCATTACATATTCGGCTCATGGTACCAAAGCCACGAAATC GCCCGACGCGGAGGCTTCTTCTACCTCGGCCTGACGCTGGGCACCCTAACAGCAAGCTTCATCCAAGCTGGCGCA TCCGCGCAACTAGACGGAGTAAACGGCCTAGCCGGATGGCGGTGGATGTACATCATCTGCGCGGTGATCACCATC CCCGTCGGCATCCTGGGATTCATAGTCCTCCCCGGAACGCCAGACAAACCGAACCGAATTGTGCTAAGCAAATCC GACATCCAACTCGTAAGGACTCGACTCCAAAAAGCCGGACACGGGGTCCAAGAATCCAACGTCTCATGGAGAACT TGTGTACGGGTGCTACGGAACTGGAAGTTCTGGGCGTTGTTGTTGGTGGACATTTTCTTTTGGAACGCGTGCGTG CAAACCAACACGGGTGGGTACCTTCTCTGGTTGAAGAGTCTGAATCGGTACTCGACTAGCAAGGTGAATGAGCTA TTTGCGATCGCGCCCGGGCTGGGGATGTTTTACACCCTGCTTGTGTGCTTCGCATCAGATTTGGTCCTGGGTCCG GCGTGGGCTATTACGCTTGCGCATGTGTGGAATATCATTGGCTTGGTGATTCAGGTTATCTGGGATGTGCCGGAG TCGGCGCTGTGGTTCGCTTTCTCGACGATGTATTCGTCTGTGGCCATGTCCAGTGTGCTGATGGGCTGGATCAAC AGCGAGATACGGCATTCGCCTGACGAGCGGGCAGTTATCTTGATTGTGTTAAACACTATTGCACAGTCTACGACG GCGTGGACGCCGCTATTGGTTTTCAAGACGGTCGAGGGGCCGAGGTTCACGAAGGGCTATTCATTTGTGCTTGCC TGTGCGATCTGCTTGATTGCATCGTCGCACATTACGAAGTACTTCATTTCAAAAGAGGATCGCGCGATATCAGCT ACGGATGAGGACTCGAGGGCCTCTCGAGACGAGCCAGAGTCTGGATCTGCTGTCGTGCAGGTTGCTCGACCTAAG ACTGACTACAGATACACTGATGAGGAAGGGATGGACGCCAAGTGA |
| Gene | >Ani_SJS100_1|g6621.t1 ATGAAATTTCCCAGGATAACATGGTTCTCGCCTGACGACTCCCCAGCGGAACGACGTCTCCTCTTCAAACTCGAT CTCCTCATCGTTCCTTATGCTTTTCTCGCTTACTGGACCAAATATATTGACCAGGCAAATATTAGTGAGTTTCAC CCACTCAGTACCTCCATTTTGTCAATACCAATTGGCGCAATAACATTAACAATGACACTTGTCAACAGACAATGC CTACGTCTCTGGAATGGAACAATCCCTTAACCTCAAAGGGAATGACCTCGTCAACCTTCAAACTATCTACACCGT TGGCGCTGTCCTAGGTCAACTCCCATTTGCTTACCTGTTCACCAAATACCCCATCTCGTGGCTCATCCCCGGGAT GGATCTGCTCTGGGGGGTCTTTACTTTGCTGCAATACCGGGCTACTTCGTATGAGGAAATGATGGCATATCGATT CTTGGTGGGATGGTTCGAGGTATATCCCCAATTTATCACTACCTCAATTGGAATCCAATTACTGACCTGTCGTCA GGCTGCATTCTTCCCAGGGATGCATTACATATTCGGTATGTCCAACCCACTAGGAGTACAGCCCAACAAATAGCT AACATCAAAACCAGGCTCATGGTACCAAAGCCACGAAATCGCCCGACGCGGAGGCTTCTTCTACCTCGGCCTGAC GCTGGGCACCCTAACAGCAAGCTTCATCCAAGCTGGCGCATCCGCGCAACTAGACGGAGTAAACGGCCTAGCCGG ATGGCGGTGGATGTACATCATCTGCGCGGTGATCACCATCCCCGTCGGCATCCTGGGATTCATAGTCCTCCCCGG AACGCCAGACAAACCGAACCGAATTGTGCTAAGCAAATCCGACATCCAACTCGTAAGGACTCGACTCCAAAAAGC CGGACACGGGGTCCAAGAATCCAACGTCTCATGGAGAACTTGTGTACGGGTGCTACGGAACTGGAAGTTCTGGGC GTTGTTGTTGGTGGACATTTTCTTTTGGAACGCGTGCGTGCAAACCAACACGGGTGGGTACCTTCTCTGGTTGAA GAGTCTGAATCGGTACTCGACTAGCAAGGTGAATGAGCTATTTGCGATCGCGCCCGGGCTGGGGATGTTTTACAC CCTGCTTGTGTGCTTCGCATCAGATTTGGTCCTGGGTCCGGCGTGGGCTATTACGCTTGCGCATGTGTGGAATAT CATTGGCTTGGTGATTCAGGTTATCTGGGATGTGCCGGAGTCGGCGCTGTGGTTCGCTTTCTCGACGATGTATTC GTCTGTGGCCATGTCCAGTGTGCTGATGGGCTGGATCAACAGCGAGATACGGCATTCGCCTGACGAGCGGGCAGT TATCTTGATTGTGTTAAACACTATTGCACAGTCTACGACGGCGTGGACGCCGCTATTGGTTTTCAAGACGGTCGA GGGGCCGAGGTTCACGAAGGGCTATTCATTTGTGCTTGCCTGTGCGATCTGCTTGATTGCATCGTCGCACATTAC GAAGTACTTCATTTCAAAAGAGTACGTTCTGCATTGATGCTTGCTAGTATTTGGGGTGATACTAATGTACCTAGG GATCGCGCGATATCAGCTACGGATGAGGACTCGAGGGCCTCTCGAGACGAGCCAGAGTCTGGATCTGCTGTCGTG CAGGTTGCTCGACCTAAGACTGACTACAGATACACTGATGAGGAAGGGATGGACGCCAAGTGA |