© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6615.t1 |
| Gene name | |
| Location | scaffold_042:7254..8947 |
| Strand | + |
| Gene length (bp) | 1693 |
| Transcript length (bp) | 1596 |
| Coding sequence length (bp) | 1596 |
| Protein length (aa) | 532 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 1.7E-101 | 31 | 476 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 76 | 98 | 22 |
| 3 | 111 | 133 | 22 |
| 4 | 165 | 187 | 22 |
| 5 | 194 | 216 | 22 |
| 6 | 236 | 258 | 22 |
| 7 | 270 | 292 | 22 |
| 8 | 322 | 344 | 22 |
| 9 | 356 | 375 | 19 |
| 10 | 390 | 412 | 22 |
| 11 | 433 | 455 | 22 |
| 12 | 470 | 492 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6615.t1 MKFKRPHLRVPQSRSAFADGSARWTNLDLDPVPLHRRQWGPLSFISYWISDAFNAATWQFASSIIAVGLSWRESL IIVAISFFIMSFVIAGNGAVGAIYHIPFPVISRASWGFWGSYVAIVSRVILALFWFAIQNVNGGNAVRAMIGAIW PSFLRVKNEIPEDQGITTNGMVGYFIFWLFQLPFLCIHPNKVRWLFVVKSVLVPIAWIAILIWAFVAEGGGKMFE QKATVSGSQYSWVFLASMTSVLGNYATLSVNQSDFSRYSRVTAKWQLLYVPMLPIVFTFISFIGIAASSAGYARY GGSIPWDPIELISHWSSRACRFFAAFSFALASLGVNISANSISAANDLMALFPGHVNLRRGQIICGILSWALVPW KILESADSFLNFMSAYAIFLGPIAAIMLWDFWLLKHGKYDTLALYQPNNPVYRYSKWGVNWRAIVAFIVGVVPSL PGLINSVNSSISVGVGLHPYQFGWLLGFVGTSVVYVGLSWLFPARHAIIERAVMAEEIYDGREVDAGSEEQLDNM QEKAKV* |
| Coding | >Ani_SJS100_1|g6615.t1 ATGAAGTTCAAACGGCCTCATCTTCGAGTGCCGCAGTCGCGCTCTGCTTTTGCGGATGGAAGCGCTCGCTGGACA AATCTCGATCTCGATCCGGTTCCTCTCCATCGTCGACAATGGGGACCGCTCAGCTTCATCTCGTATTGGATTTCC GATGCATTTAATGCAGCTACATGGCAGTTTGCTAGCAGTATAATAGCAGTCGGACTTAGCTGGCGCGAATCCCTC ATAATCGTCGCTATTTCGTTCTTCATCATGTCTTTCGTCATTGCGGGCAACGGCGCTGTCGGCGCGATCTATCAC ATTCCGTTCCCGGTGATCTCACGGGCTAGCTGGGGATTCTGGGGATCATACGTTGCCATCGTCTCTCGCGTCATC TTGGCGCTGTTCTGGTTCGCAATTCAGAACGTCAACGGCGGAAACGCCGTGCGTGCCATGATCGGGGCCATCTGG CCCAGCTTCTTGAGGGTGAAGAACGAGATCCCTGAGGATCAGGGCATTACAACAAATGGCATGGTCGGATACTTT ATCTTCTGGCTGTTTCAACTGCCGTTTCTCTGCATCCACCCGAACAAAGTGCGGTGGCTGTTCGTGGTGAAGTCT GTGCTTGTGCCGATCGCGTGGATTGCGATTCTGATCTGGGCATTTGTGGCAGAGGGAGGAGGTAAAATGTTCGAG CAGAAAGCGACAGTCTCGGGGTCACAGTACAGCTGGGTGTTCCTGGCGAGTATGACATCGGTTCTGGGGAACTAT GCCACCCTCAGTGTCAACCAGTCCGACTTTTCTCGATACTCGCGTGTTACGGCAAAGTGGCAGCTCCTATACGTC CCTATGCTGCCTATCGTGTTTACTTTTATCTCGTTCATCGGCATTGCCGCCTCCTCAGCCGGCTACGCCAGATAT GGTGGATCAATTCCATGGGATCCGATCGAACTAATCAGCCACTGGTCCAGCCGGGCATGTCGGTTTTTCGCCGCA TTTTCATTCGCTCTGGCTTCCCTCGGCGTCAACATATCCGCCAATTCGATATCCGCAGCAAACGATCTGATGGCC CTGTTTCCGGGACATGTCAATCTGCGCCGAGGCCAGATCATCTGCGGCATTTTGTCTTGGGCACTGGTGCCATGG AAGATTCTTGAGTCCGCGGACAGCTTTCTGAACTTCATGTCTGCGTATGCCATCTTCCTGGGACCGATTGCAGCC ATCATGCTGTGGGACTTTTGGCTGTTGAAGCACGGAAAGTACGACACCCTGGCTCTGTACCAGCCGAACAACCCG GTGTATCGATACTCGAAATGGGGAGTGAACTGGCGCGCCATCGTGGCATTCATCGTCGGCGTGGTGCCGAGTCTG CCAGGACTGATCAACTCGGTCAACAGCAGTATTTCGGTGGGAGTGGGGCTCCACCCGTACCAGTTCGGATGGCTG CTAGGGTTCGTAGGGACCAGCGTGGTATATGTAGGGTTATCGTGGTTGTTTCCTGCCCGGCATGCCATCATTGAG AGGGCTGTGATGGCAGAAGAGATCTACGATGGACGGGAAGTTGACGCAGGATCCGAGGAACAGTTGGACAACATG CAAGAGAAGGCCAAAGTATAA |
| Transcript | >Ani_SJS100_1|g6615.t1 ATGAAGTTCAAACGGCCTCATCTTCGAGTGCCGCAGTCGCGCTCTGCTTTTGCGGATGGAAGCGCTCGCTGGACA AATCTCGATCTCGATCCGGTTCCTCTCCATCGTCGACAATGGGGACCGCTCAGCTTCATCTCGTATTGGATTTCC GATGCATTTAATGCAGCTACATGGCAGTTTGCTAGCAGTATAATAGCAGTCGGACTTAGCTGGCGCGAATCCCTC ATAATCGTCGCTATTTCGTTCTTCATCATGTCTTTCGTCATTGCGGGCAACGGCGCTGTCGGCGCGATCTATCAC ATTCCGTTCCCGGTGATCTCACGGGCTAGCTGGGGATTCTGGGGATCATACGTTGCCATCGTCTCTCGCGTCATC TTGGCGCTGTTCTGGTTCGCAATTCAGAACGTCAACGGCGGAAACGCCGTGCGTGCCATGATCGGGGCCATCTGG CCCAGCTTCTTGAGGGTGAAGAACGAGATCCCTGAGGATCAGGGCATTACAACAAATGGCATGGTCGGATACTTT ATCTTCTGGCTGTTTCAACTGCCGTTTCTCTGCATCCACCCGAACAAAGTGCGGTGGCTGTTCGTGGTGAAGTCT GTGCTTGTGCCGATCGCGTGGATTGCGATTCTGATCTGGGCATTTGTGGCAGAGGGAGGAGGTAAAATGTTCGAG CAGAAAGCGACAGTCTCGGGGTCACAGTACAGCTGGGTGTTCCTGGCGAGTATGACATCGGTTCTGGGGAACTAT GCCACCCTCAGTGTCAACCAGTCCGACTTTTCTCGATACTCGCGTGTTACGGCAAAGTGGCAGCTCCTATACGTC CCTATGCTGCCTATCGTGTTTACTTTTATCTCGTTCATCGGCATTGCCGCCTCCTCAGCCGGCTACGCCAGATAT GGTGGATCAATTCCATGGGATCCGATCGAACTAATCAGCCACTGGTCCAGCCGGGCATGTCGGTTTTTCGCCGCA TTTTCATTCGCTCTGGCTTCCCTCGGCGTCAACATATCCGCCAATTCGATATCCGCAGCAAACGATCTGATGGCC CTGTTTCCGGGACATGTCAATCTGCGCCGAGGCCAGATCATCTGCGGCATTTTGTCTTGGGCACTGGTGCCATGG AAGATTCTTGAGTCCGCGGACAGCTTTCTGAACTTCATGTCTGCGTATGCCATCTTCCTGGGACCGATTGCAGCC ATCATGCTGTGGGACTTTTGGCTGTTGAAGCACGGAAAGTACGACACCCTGGCTCTGTACCAGCCGAACAACCCG GTGTATCGATACTCGAAATGGGGAGTGAACTGGCGCGCCATCGTGGCATTCATCGTCGGCGTGGTGCCGAGTCTG CCAGGACTGATCAACTCGGTCAACAGCAGTATTTCGGTGGGAGTGGGGCTCCACCCGTACCAGTTCGGATGGCTG CTAGGGTTCGTAGGGACCAGCGTGGTATATGTAGGGTTATCGTGGTTGTTTCCTGCCCGGCATGCCATCATTGAG AGGGCTGTGATGGCAGAAGAGATCTACGATGGACGGGAAGTTGACGCAGGATCCGAGGAACAGTTGGACAACATG CAAGAGAAGGCCAAAGTATAA |
| Gene | >Ani_SJS100_1|g6615.t1 ATGAAGTTCAAACGGCCTCATCTTCGAGTGCCGCAGTCGCGCTCTGCTTTTGCGGATGGAAGCGCTCGCTGGACA AATCTCGATCTCGATCCGGTTCCTCTCCATCGTCGACAATGGGGACCGCTCAGCTTCATCTGTACGACCCCCCCT TTTTTTTTTGTTACTCTTGCTATGCTGATGGATGTACAGCGTATTGGATTTCCGATGCATTTAATGCAGCTACAT GGCAGTTTGCTAGCAGTATAATAGCAGTCGGACTTAGCTGGCGCGAATCCCTCATAATCGTCGCTATTTCGTTCT TCATCATGTCTTTCGTCATTGCGGGCAACGGCGCTGTCGGCGCGATCTATCACATTCCGTTCCCGGTGATCTCAC GGGCTAGCTGGGGATTCTGGGGATCATACGTTGCCATCGTCTCTCGCGTCATCTTGGCGCTGTTCTGGTTCGCAA TTCAGAACGTCAACGGCGGAAACGCCGTGCGTGCCATGATCGGGGCCATCTGGCCCAGCTTCTTGAGGGTGAAGA ACGAGATCCCTGAGGATCAGGGCATTACAACAAATGGCATGGTCGGATACTTTATCTTCTGGCTGTTTCAACTGC CGTTTCTCTGCATCCACCCGAACAAAGTGCGGTGGCTGTTCGTGGTGAAGTCTGTGCTTGTGCCGATCGCGTGGA TTGCGATTCTGATCTGGGCATTTGTGGCAGAGGGAGGAGGTAAAATGTTCGAGCAGAAAGCGACAGTCTCGGGGT CACAGTACAGCTGGGTGTTCCTGGCGAGTATGACATCGGTTCTGGGGAACTATGCCACCCTCAGTGTCAACCAGG TATGTAGGCTAATGGAAGGCGATGCAATGACTAACAATCGTAGTCCGACTTTTCTCGATACTCGCGTGTTACGGC AAAGTGGCAGCTCCTATACGTCCCTATGCTGCCTATCGTGTTTACTTTTATCTCGTTCATCGGCATTGCCGCCTC CTCAGCCGGCTACGCCAGATATGGTGGATCAATTCCATGGGATCCGATCGAACTAATCAGCCACTGGTCCAGCCG GGCATGTCGGTTTTTCGCCGCATTTTCATTCGCTCTGGCTTCCCTCGGCGTCAACATATCCGCCAATTCGATATC CGCAGCAAACGATCTGATGGCCCTGTTTCCGGGACATGTCAATCTGCGCCGAGGCCAGATCATCTGCGGCATTTT GTCTTGGGCACTGGTGCCATGGAAGATTCTTGAGTCCGCGGACAGCTTTCTGAACTTCATGTCTGCGTATGCCAT CTTCCTGGGACCGATTGCAGCCATCATGCTGTGGGACTTTTGGCTGTTGAAGCACGGAAAGTACGACACCCTGGC TCTGTACCAGCCGAACAACCCGGTGTATCGATACTCGAAATGGGGAGTGAACTGGCGCGCCATCGTGGCATTCAT CGTCGGCGTGGTGCCGAGTCTGCCAGGACTGATCAACTCGGTCAACAGCAGTATTTCGGTGGGAGTGGGGCTCCA CCCGTACCAGTTCGGATGGCTGCTAGGGTTCGTAGGGACCAGCGTGGTATATGTAGGGTTATCGTGGTTGTTTCC TGCCCGGCATGCCATCATTGAGAGGGCTGTGATGGCAGAAGAGATCTACGATGGACGGGAAGTTGACGCAGGATC CGAGGAACAGTTGGACAACATGCAAGAGAAGGCCAAAGTATAA |