Fungal Genomics

General Properties

Protein ID	Ani_SJS100_1|g6604.t1
Gene name
Location	scaffold_041:253835..254808
Strand	+
Gene length (bp)	973
Transcript length (bp)	861
Coding sequence length (bp)	861
Protein length (aa)	287

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04479	RTA1	RTA1 like protein	5.5E-70	44	254

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No
GO:0031224	intrinsic component of membrane	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22
2	39	61	22
3	76	98	22
4	118	140	22
5	150	172	22
6	197	214	17
7	229	251	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	3
Orthogroup	6883
Change Orthofinder run	3: Aspergillus niger - all strains

Species	Protein ID
Aspergillus niger CBS 112.32	Ani_SJS6_1|g5124.t1
Aspergillus niger CBS 113.50	Ani_SJS3_1|g5767.t1
Aspergillus niger CBS 115988	Ani_SJS16_1|g5398.t1
Aspergillus niger CBS 115989	Ani_SJS83_1|g5380.t1
Aspergillus niger CBS 118.52	Ani_SJS14_1|g3814.t1
Aspergillus niger CBS 124.48	Ani_SJS7_1|g3615.t1
Aspergillus niger CBS 131.52	Ani_SJS8_1|g6556.t1
Aspergillus niger CBS 133816	Ani_SJS71_1|g7753.t1
Aspergillus niger CBS 147320	Ani_SJS28_1|g6489.t1
Aspergillus niger CBS 147321	Ani_SJS30_1|g5862.t1
Aspergillus niger CBS 147322	Ani_SJS35_1|g3685.t1
Aspergillus niger CBS 147323	Ani_SJS38_1|g1538.t1
Aspergillus niger CBS 147324	Ani_SJS39_1|g4019.t1
Aspergillus niger CBS 147343	Ani_SJS115_1|g5118.t1
Aspergillus niger CBS 147344	Ani_SJS70_1|g2495.t1
Aspergillus niger CBS 147345	Ani_SJS72_1|g3855.t1
Aspergillus niger CBS 147346	Ani_SJS75_1|g4424.t1
Aspergillus niger CBS 147347	Ani_SJS76_1|g3021.t1
Aspergillus niger CBS 147352	Ani_SJS95_1|g5752.t1
Aspergillus niger CBS 147353	Ani_SJS100_1|g6604.t1 (this protein)
Aspergillus niger CBS 147371	Ani_SJS27_1|g5107.t1
Aspergillus niger CBS 147482	Ani_SJS55_1|g5236.t1
Aspergillus niger CBS 630.78	Ani_SJS18_1|g3938.t1
Aspergillus niger CBS 769.97	Ani_SJS82_1|g7603.t1

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1|g6604.t1 MAFTLYYYTPSAAAAGIFVVLFGISTVLHFLQLVRTRTWFMIPFFIGGILETIGYVGRLLSSLESPNYSTGSYAM QSALILIAPAFLAASIYMTLGRIIRMVQAEQYSVFRLNWVTKIFVAGDVLSFLMQASGAGLMVSNSSDPSTGEHI IIGGLFVQIIFFGFFIITALIFQMRLAKAPTGTSVDLSHIWRRHMNALYISSVLIFVRSIVRVVEYLQGYDGYLM KHEVFIYVFDALLMFLAMEILQFIHPSQVNCYLGRGDRYSDKVIKTQKFMSVPVEMEVSSV*
Coding	>Ani_SJS100_1|g6604.t1 ATGGCATTCACTCTCTACTACTACACCCCCTCTGCTGCGGCAGCAGGCATCTTTGTTGTTCTGTTCGGCATCAGC ACTGTATTGCACTTTCTGCAGCTGGTTCGGACGCGAACGTGGTTCATGATCCCTTTCTTCATTGGAGGAATCTTG GAAACAATCGGATATGTTGGCCGTCTGCTGTCATCGCTTGAAAGCCCCAACTACAGCACAGGCTCGTATGCCATG CAAAGCGCCCTTATTCTGATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTCGCATCATTCGA ATGGTCCAAGCCGAACAGTACTCGGTGTTCAGGTTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTT TCCTTTCTGATGCAAGCCTCTGGCGCTGGTCTCATGGTCAGCAACTCTAGCGACCCATCCACGGGCGAGCACATT ATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGGCTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGA CTAGCGAAGGCTCCCACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCGCCACATGAACGCTCTTTACATC TCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGTGGTGGAGTACCTGCAGGGATATGACGGCTATCTCATG AAGCATGAGGTTTTCATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATGGAGATACTCCAATTCATCCAT CCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCGTTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATG TCTGTGCCGGTGGAAATGGAGGTTTCGTCCGTTTGA
Transcript	>Ani_SJS100_1|g6604.t1 ATGGCATTCACTCTCTACTACTACACCCCCTCTGCTGCGGCAGCAGGCATCTTTGTTGTTCTGTTCGGCATCAGC ACTGTATTGCACTTTCTGCAGCTGGTTCGGACGCGAACGTGGTTCATGATCCCTTTCTTCATTGGAGGAATCTTG GAAACAATCGGATATGTTGGCCGTCTGCTGTCATCGCTTGAAAGCCCCAACTACAGCACAGGCTCGTATGCCATG CAAAGCGCCCTTATTCTGATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTCGCATCATTCGA ATGGTCCAAGCCGAACAGTACTCGGTGTTCAGGTTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTT TCCTTTCTGATGCAAGCCTCTGGCGCTGGTCTCATGGTCAGCAACTCTAGCGACCCATCCACGGGCGAGCACATT ATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGGCTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGA CTAGCGAAGGCTCCCACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCGCCACATGAACGCTCTTTACATC TCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGTGGTGGAGTACCTGCAGGGATATGACGGCTATCTCATG AAGCATGAGGTTTTCATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATGGAGATACTCCAATTCATCCAT CCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCGTTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATG TCTGTGCCGGTGGAAATGGAGGTTTCGTCCGTTTGA
Gene	>Ani_SJS100_1|g6604.t1 ATGGCATTCACTCTCTACTACTACACCCCCTCTGCTGCGGCAGCAGGCATCTTTGTTGTTCTGTTCGGCATCAGC ACTGTATTGCACTTTCTGCAGCTGGTTCGGACGCGAACGTGGTTCATGATCCCTTTCTTCATTGGAGGAATCTGT CAGTCACCCAACCCCGACCATGCAGAACTACTACTGACATTATGCTTCATCTTCAGTGGAAACAATCGGATATGT TGGCCGTCTGCTGTCATCGCTTGAAAGCCCCAACTACAGCACAGGCTCGTATGCCATGCAAAGCGCCCTTATTCT GATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTCGCATCATTCGAATGGTCCAAGCCGAACA GTACTCGGTGTTCAGGTTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTTTCCTTTCTGATGCAAGC CTCTGGTGCGTATATTCCTGTCTCCGAATCCTTTCTGGCAGTATCGCTAAGAACAGTAGGCGCTGGTCTCATGGT CAGCAACTCTAGCGACCCATCCACGGGCGAGCACATTATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGG CTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGACTAGCGAAGGCTCCCACCGGCACTTCCGTTGATTTATC GCACATCTGGCGTCGCCACATGAACGCTCTTTACATCTCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGT GGTGGAGTACCTGCAGGGATATGACGGCTATCTCATGAAGCATGAGGTTTTCATTTATGTGTTTGATGCGTTGCT GATGTTCCTGGCGATGGAGATACTCCAATTCATCCATCCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCG TTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATGTCTGTGCCGGTGGAAATGGAGGTTTCGTCCGTTTGA