© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g6600.t1 |
| Gene name | |
| Location | scaffold_041:245180..247312 |
| Strand | + |
| Gene length (bp) | 2132 |
| Transcript length (bp) | 1476 |
| Coding sequence length (bp) | 1476 |
| Protein length (aa) | 492 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.5E-26 | 47 | 378 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| 2 | 88 | 110 | 22 |
| 3 | 133 | 155 | 22 |
| 4 | 168 | 190 | 22 |
| 5 | 205 | 227 | 22 |
| 6 | 273 | 295 | 22 |
| 7 | 315 | 337 | 22 |
| 8 | 342 | 364 | 22 |
| 9 | 374 | 393 | 19 |
| 10 | 406 | 428 | 22 |
| 11 | 438 | 460 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6600.t1 METPEDSNKGPIDRISSVNEHLSVEIRPEDERALVWRLDCFFLVVGFLGYAFKYLDQTNISNAYVSGMETDLELY GNEYNYFTTFFNIGYMIMLYPSCIIISHIGPSIWLPACEVLWGILTCCLSTVTSAKQVYGLRFLIGFFEGATWPG YFTIISQWYLPHEMALRMSLYNMAQPVGAMLSGAMQGAMSTNLEGVMGRSGWRWAFIINGVCTIFIALLAFIILP GFPERQNPLSKIYLRPQHIKTAIARTRRVGRKPQIGIQVKSFLRCFRFWHLWLFAIAWAIGTGTTPTSYFNLWLK SLKNPDGTAKYSVAMLDYLPIAGQAIQLVAEILFSGFSDYFGVRLPFLLLHAVINIVSLIILTIQPSNEHTYMAG WYMDYVGAVSTMLLCAWASAHLETEPQVRTVLFATGTLFSYLLSAFLPIAAYPASEAPHWRIGAKLYLGLSCLAA VLFVCIHFAFKWEERRKAKTRRVDDWNVTADEDRFSEGTVA* |
| Coding | >Ani_SJS100_1|g6600.t1 ATGGAGACACCCGAGGATAGCAACAAAGGCCCGATCGATAGGATCTCATCTGTGAACGAGCACCTATCGGTTGAG ATCCGACCGGAGGATGAGAGGGCACTGGTATGGAGGCTCGATTGCTTCTTCCTTGTCGTGGGGTTCCTGGGATAT GCATTCAAGTACCTGGACCAAACGAACATTAGCAATGCCTATGTTTCCGGTATGGAGACAGATCTTGAGCTCTAT GGGAATGAATACAATTATTTCACGACCTTCTTCAATATCGGGTACATGATTATGCTTTATCCCTCGTGCATCATC ATTTCTCACATCGGGCCATCGATATGGCTGCCAGCATGCGAGGTGTTGTGGGGTATCCTTACCTGCTGCTTATCC ACAGTCACGTCTGCTAAGCAGGTGTACGGCTTGCGTTTCCTTATTGGCTTCTTCGAAGGTGCGACGTGGCCTGGC TATTTTACCATTATCAGCCAATGGTATCTCCCCCATGAGATGGCCTTGCGTATGAGCCTATATAACATGGCCCAG CCAGTTGGGGCTATGCTTTCTGGCGCCATGCAGGGCGCAATGTCTACCAACCTGGAAGGTGTTATGGGGCGAAGT GGCTGGCGATGGGCTTTCATAATAAACGGCGTTTGCACAATCTTCATCGCTTTGTTGGCCTTCATCATCTTACCT GGCTTCCCTGAAAGGCAAAACCCATTGTCGAAGATCTATCTCAGGCCACAGCATATTAAGACTGCTATTGCACGC ACACGCCGCGTGGGCCGGAAACCGCAGATCGGCATCCAAGTCAAAAGCTTTCTGCGCTGTTTCAGATTCTGGCAT CTATGGCTGTTCGCCATTGCTTGGGCCATCGGCACCGGCACAACGCCAACGAGCTACTTCAACCTCTGGCTCAAG TCGTTGAAGAACCCTGACGGAACTGCCAAATACTCTGTGGCCATGCTCGATTACCTTCCGATCGCTGGTCAAGCA ATCCAACTTGTTGCTGAGATCCTTTTCAGCGGTTTCAGTGACTATTTCGGAGTCAGGCTGCCGTTCCTTCTCTTG CATGCGGTAATCAACATTGTATCTTTGATTATCCTGACGATACAACCGAGCAATGAGCACACATATATGGCTGGG TGGTATATGGATTATGTCGGAGCGGTTTCGACAATGCTTTTGTGTGCGTGGGCATCTGCCCATCTGGAGACGGAG CCGCAAGTCCGCACCGTCTTGTTTGCCACCGGAACTCTCTTCTCGTACTTGCTGAGTGCCTTCCTTCCCATAGCT GCATACCCAGCATCGGAAGCTCCTCACTGGCGCATTGGAGCAAAGCTATACCTCGGCCTTTCGTGCTTGGCAGCG GTGTTGTTTGTTTGCATCCATTTTGCCTTCAAGTGGGAAGAACGGCGGAAGGCGAAGACACGTCGGGTTGACGAC TGGAATGTGACTGCAGATGAGGATAGATTTAGTGAAGGCACAGTGGCTTAG |
| Transcript | >Ani_SJS100_1|g6600.t1 ATGGAGACACCCGAGGATAGCAACAAAGGCCCGATCGATAGGATCTCATCTGTGAACGAGCACCTATCGGTTGAG ATCCGACCGGAGGATGAGAGGGCACTGGTATGGAGGCTCGATTGCTTCTTCCTTGTCGTGGGGTTCCTGGGATAT GCATTCAAGTACCTGGACCAAACGAACATTAGCAATGCCTATGTTTCCGGTATGGAGACAGATCTTGAGCTCTAT GGGAATGAATACAATTATTTCACGACCTTCTTCAATATCGGGTACATGATTATGCTTTATCCCTCGTGCATCATC ATTTCTCACATCGGGCCATCGATATGGCTGCCAGCATGCGAGGTGTTGTGGGGTATCCTTACCTGCTGCTTATCC ACAGTCACGTCTGCTAAGCAGGTGTACGGCTTGCGTTTCCTTATTGGCTTCTTCGAAGGTGCGACGTGGCCTGGC TATTTTACCATTATCAGCCAATGGTATCTCCCCCATGAGATGGCCTTGCGTATGAGCCTATATAACATGGCCCAG CCAGTTGGGGCTATGCTTTCTGGCGCCATGCAGGGCGCAATGTCTACCAACCTGGAAGGTGTTATGGGGCGAAGT GGCTGGCGATGGGCTTTCATAATAAACGGCGTTTGCACAATCTTCATCGCTTTGTTGGCCTTCATCATCTTACCT GGCTTCCCTGAAAGGCAAAACCCATTGTCGAAGATCTATCTCAGGCCACAGCATATTAAGACTGCTATTGCACGC ACACGCCGCGTGGGCCGGAAACCGCAGATCGGCATCCAAGTCAAAAGCTTTCTGCGCTGTTTCAGATTCTGGCAT CTATGGCTGTTCGCCATTGCTTGGGCCATCGGCACCGGCACAACGCCAACGAGCTACTTCAACCTCTGGCTCAAG TCGTTGAAGAACCCTGACGGAACTGCCAAATACTCTGTGGCCATGCTCGATTACCTTCCGATCGCTGGTCAAGCA ATCCAACTTGTTGCTGAGATCCTTTTCAGCGGTTTCAGTGACTATTTCGGAGTCAGGCTGCCGTTCCTTCTCTTG CATGCGGTAATCAACATTGTATCTTTGATTATCCTGACGATACAACCGAGCAATGAGCACACATATATGGCTGGG TGGTATATGGATTATGTCGGAGCGGTTTCGACAATGCTTTTGTGTGCGTGGGCATCTGCCCATCTGGAGACGGAG CCGCAAGTCCGCACCGTCTTGTTTGCCACCGGAACTCTCTTCTCGTACTTGCTGAGTGCCTTCCTTCCCATAGCT GCATACCCAGCATCGGAAGCTCCTCACTGGCGCATTGGAGCAAAGCTATACCTCGGCCTTTCGTGCTTGGCAGCG GTGTTGTTTGTTTGCATCCATTTTGCCTTCAAGTGGGAAGAACGGCGGAAGGCGAAGACACGTCGGGTTGACGAC TGGAATGTGACTGCAGATGAGGATAGATTTAGTGAAGGCACAGTGGCTTAG |
| Gene | >Ani_SJS100_1|g6600.t1 ATGGAGACACCCGAGGATAGCAACAAAGGCCCGATCGATAGGATCTCATCTGTGAACGAGCACCTATCGGTTGAG ATCCGACCGGAGGATGAGAGGGCACTGGTATTGTTTTTACCACGCAACATCGTGGATGTGCTCAATAGCTGACCA ATTTCAGGTATGGAGGCTCGATTGCTTCTTCCTTGTCGTGGGGTTCCTGGGATATGCATTCAAGTACCTGGACCA AACGAACATTGTTAGTATCCGCAACGATCTGAAAAGGGATATGCACTTATGCTTGGCAGAGCAATGCCTATGTTT CCGGTATGGAGACAGATCTTGAGCTCTATGGGAATGAATACAATTATTTCACGACCTTCTTCAAGTAAGTCGTCA CCCCTGCTTATCGCTAATGCTGACTCCATCAGTATCGGGTACATGATTATGCTTTATCCCTCGTGCATCATCATT TCTCACATCGGGCCATCGATATGGCTGCCAGCATGCGAGGTGAGGTTTCCCTACACGTAGTTGATTCATGGTTGA CCAACAAGGATAGGTGTTGTGGGGTATCCTTACCTGCTGCTTATCCACAGTCACGTCTGCTAAGCAGGTATTTCC CCCAGCTTCTGGACATGCTTCGGCATAGCTAATTGGCTAGGTGTACGGCTTGCGTTTCCTTATTGGCTTCTTCGA AGGTGCGACGTGGCCTGGCTATTTTACCATTATCAGGTATGTCTCGGAATGCTCTCTGCAAGTTGTGAATACGAC TAATGACAATGATCAAAGCCAATGGTATCTCCCCCATGAGATGGCCTTGCGTATGAGCCTATATAACATGGCCCA GCCAGTTGGGGCTATGCTTTCTGGCGCCATGCAGGGCGCAATGTCTACCAACCTGGAAGGTGTTATGGGGCGAAG TGGCTGGCGATGGGCTTTCATAATAAACGTATGTCTCGCTTTGTTGTATGCCCGTGTTCATATGACTGAACGAGA AATATTATGGATAGGGCGTTTGCACAATCTTCATCGCTTTGTTGGCCTTCATCATCTTACCTGGCTTCGTGAGAA AATCCAACTCTTCTGATGGGATACCTGCTAATGGGCATAGCCTGAAAGGCAAAACCCATTGTCGAAGATCTATCT CAGGCCACAGCATATTAGTAAGTAGAGATCAAAGGAGGTATCAAACAAATGGCTAACCAGATACAGAGACTGCTA TTGCACGCACACGCCGCGTGGGCCGGAAACCGCAGATCGGCATCCAAGTCAAAAGCTTTCTGCGCTGTTTCAGAT TCTGGCATCTATGGCTGTTCGCCAGTATGAGTCACTTCATGCTATCATATAGTCAATAGCTAACATTGTTCCAGT TGCTTGGGCCATCGGCACCGGCACAACGCCAACGAGCTACTTCAACCTCTGGCTCAAGTCGTTGAAGAACCCTGA CGGAACTGCCAAATAGTATGCGTTTCACCCCATTGTCTGCATCCAAGTCTAATTCGGTGTAGCTCTGTGGCCATG CTCGATTACCTTCCGATCGCTGGTCAAGCAATCCAACTTGTTGCTGAGATCCTTTTCAGCGGTTTCAGTGACTAT TTCGGAGTCAGGCTGCCGTTCCTTCTCTTGCATGCGGTAAGTCACACCAGAGAAGTCACTTGTTGGTACTGACCA AGTACTAGGTAATCAACATTGTATCTTTGATTATCCTGACGATACAACCGAGCAATGAGCACACATATATGGCTG GGTGGTATATGGATTATGTCGGAGCGTAAGCCTCCCCTATCGATAGGCACAGGAAACCCAGCTGACGTCTACTGT TTAGGGTTTCGACAATGCTTTTGTGTGCGTGGGCATCTGCCCATCTGGAGACGGAGCCGCAAGTCCGCACCGTCT TGTTTGCCACCGGAACTCTCTTCTCGTACTTGCTGAGTGCCTTCCTTCCCATAGCTGCATACCCAGCATCGGAAG CTCCTCACTGGCGCATTGGAGCAAAGCTATACCTCGGCCTTTCGTGCTTGGCAGCGGTGTTGTTTGTTTGCATCC ATTTTGCCTTCAAGTGGGAAGAACGGCGGAAGGCGAAGACACGTCGGGTTGACGACTGGAATGTGACTGCAGATG AGGATAGATTTAGTGAAGGCACAGTGGCTTAG |