© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6567.t1 |
| Gene name | |
| Location | scaffold_041:155365..157285 |
| Strand | - |
| Gene length (bp) | 1920 |
| Transcript length (bp) | 1593 |
| Coding sequence length (bp) | 1593 |
| Protein length (aa) | 531 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 3.7E-57 | 39 | 487 |
| PF00324 | AA_permease | Amino acid permease | 1.3E-23 | 58 | 488 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 71 | 93 | 22 |
| 3 | 106 | 128 | 22 |
| 4 | 132 | 154 | 22 |
| 5 | 166 | 188 | 22 |
| 6 | 193 | 215 | 22 |
| 7 | 236 | 253 | 17 |
| 8 | 268 | 290 | 22 |
| 9 | 323 | 345 | 22 |
| 10 | 377 | 399 | 22 |
| 11 | 406 | 428 | 22 |
| 12 | 446 | 468 | 22 |
| 13 | 481 | 500 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6567.t1 MSFKHGEMAIQELGSRQYKDRDDEDMAKFGRKQRFERNFGFLSMLGFTTTMMCTWEAVLTANPAAMVDGGPATLV YGFIFCWIGALLTAASLAEMASMAPTSAGQYHWVSILAPKGQAVFLSWVTGWLDMIGWWANTASGVYFAATVLQG LLVLNYDGYDFQRWHGTLLMFAALVICLLVNSFGARLLPKIEGLILILHTAGFLAILIPLVHLAPHKNAEFVFAN FTNTSGWKNSGLTWLIGLMGTNLPFIGYDGPCHMSEEVVNASVIVPWCMIATIMLNGTLGFAMVLAFLFCVGDLD AALDSATGYDFIEVFFNATKSHAGTSVMSAIVIALTICASFGFLASSSRLTWALAKDKGIPFADFLSHISTRTSG SALPLRAIAFCAIITAITCLINIGSSAAFNAMISLTTAGLFSSYEIAIVLILIKKLKNEPLQYGPWKMGRLWGIL INIGSICFLTITIFFSFFPEELPVTPTNMNWSVVVFMGEFLLGLGWYLVRGRKIYHGPVMDVPVAVGEGGVVGGD GGDDE* |
| Coding | >Ani_SJS100_1|g6567.t1 ATGTCTTTCAAACATGGAGAGATGGCAATCCAGGAGCTGGGCTCCCGGCAATACAAGGATCGTGATGATGAAGAC ATGGCAAAGTTTGGCAGGAAGCAGCGTTTCGAGAGAAATTTTGGCTTCCTGTCCATGCTGGGCTTCACAACCACG ATGATGTGTACTTGGGAGGCGGTTCTCACCGCCAATCCGGCAGCCATGGTTGACGGAGGACCAGCGACCCTCGTC TACGGGTTCATCTTCTGCTGGATTGGAGCTTTGTTAACAGCAGCCTCTCTCGCCGAAATGGCCTCGATGGCTCCA ACGTCAGCCGGTCAATACCACTGGGTATCCATACTCGCCCCTAAAGGCCAAGCTGTCTTCCTCAGCTGGGTAACC GGATGGTTGGACATGATCGGATGGTGGGCCAACACTGCATCGGGAGTGTATTTCGCCGCCACCGTCCTGCAGGGT CTTCTGGTGCTGAACTATGACGGGTATGACTTTCAACGCTGGCATGGCACACTGCTCATGTTCGCGGCGTTGGTA ATCTGCCTTCTAGTCAACTCTTTTGGGGCACGGCTTCTCCCCAAGATCGAAGGGCTGATCCTCATTCTCCATACC GCCGGCTTCCTAGCCATCCTGATCCCTCTGGTCCATCTGGCCCCGCATAAGAACGCCGAATTCGTCTTTGCGAAC TTCACCAACACCTCGGGATGGAAGAACTCTGGTCTTACCTGGCTGATTGGGTTGATGGGGACAAATCTTCCTTTT ATTGGATACGATGGCCCCTGTCATATGTCAGAAGAAGTAGTCAACGCTTCCGTCATAGTCCCCTGGTGCATGATC GCGACTATCATGCTAAACGGCACTCTGGGCTTCGCCATGGTCCTAGCCTTCCTCTTCTGCGTAGGCGACCTGGAC GCCGCCCTCGACAGCGCCACCGGATACGACTTCATCGAAGTCTTCTTCAATGCGACAAAATCCCACGCCGGAACA TCCGTAATGAGTGCCATCGTGATCGCCCTGACAATTTGCGCCTCGTTTGGATTCCTTGCCTCCTCATCGCGCCTT ACCTGGGCATTAGCCAAGGACAAGGGAATTCCATTCGCTGATTTCCTGTCGCACATAAGCACCAGGACCTCCGGC TCTGCCCTGCCCCTCCGCGCCATCGCTTTCTGCGCCATAATAACAGCCATCACCTGCCTCATCAACATCGGCTCC AGCGCAGCCTTCAACGCCATGATCTCTCTGACAACAGCGGGACTGTTCTCATCATACGAGATTGCCATCGTGCTG ATACTCATCAAGAAGCTCAAGAACGAGCCGCTCCAATACGGCCCGTGGAAGATGGGTAGGCTGTGGGGAATCCTG ATCAATATTGGGTCGATCTGTTTCTTGACCATTACTATTTTCTTCTCATTCTTTCCCGAGGAGTTGCCCGTGACG CCGACGAATATGAATTGGTCGGTGGTGGTGTTTATGGGCGAATTCCTACTCGGGTTGGGGTGGTATTTGGTTAGG GGGAGGAAGATCTATCATGGGCCGGTCATGGATGTTCCGGTTGCTGTTGGAGAAGGGGGAGTGGTGGGCGGCGAT GGCGGAGATGACGAGTAG |
| Transcript | >Ani_SJS100_1|g6567.t1 ATGTCTTTCAAACATGGAGAGATGGCAATCCAGGAGCTGGGCTCCCGGCAATACAAGGATCGTGATGATGAAGAC ATGGCAAAGTTTGGCAGGAAGCAGCGTTTCGAGAGAAATTTTGGCTTCCTGTCCATGCTGGGCTTCACAACCACG ATGATGTGTACTTGGGAGGCGGTTCTCACCGCCAATCCGGCAGCCATGGTTGACGGAGGACCAGCGACCCTCGTC TACGGGTTCATCTTCTGCTGGATTGGAGCTTTGTTAACAGCAGCCTCTCTCGCCGAAATGGCCTCGATGGCTCCA ACGTCAGCCGGTCAATACCACTGGGTATCCATACTCGCCCCTAAAGGCCAAGCTGTCTTCCTCAGCTGGGTAACC GGATGGTTGGACATGATCGGATGGTGGGCCAACACTGCATCGGGAGTGTATTTCGCCGCCACCGTCCTGCAGGGT CTTCTGGTGCTGAACTATGACGGGTATGACTTTCAACGCTGGCATGGCACACTGCTCATGTTCGCGGCGTTGGTA ATCTGCCTTCTAGTCAACTCTTTTGGGGCACGGCTTCTCCCCAAGATCGAAGGGCTGATCCTCATTCTCCATACC GCCGGCTTCCTAGCCATCCTGATCCCTCTGGTCCATCTGGCCCCGCATAAGAACGCCGAATTCGTCTTTGCGAAC TTCACCAACACCTCGGGATGGAAGAACTCTGGTCTTACCTGGCTGATTGGGTTGATGGGGACAAATCTTCCTTTT ATTGGATACGATGGCCCCTGTCATATGTCAGAAGAAGTAGTCAACGCTTCCGTCATAGTCCCCTGGTGCATGATC GCGACTATCATGCTAAACGGCACTCTGGGCTTCGCCATGGTCCTAGCCTTCCTCTTCTGCGTAGGCGACCTGGAC GCCGCCCTCGACAGCGCCACCGGATACGACTTCATCGAAGTCTTCTTCAATGCGACAAAATCCCACGCCGGAACA TCCGTAATGAGTGCCATCGTGATCGCCCTGACAATTTGCGCCTCGTTTGGATTCCTTGCCTCCTCATCGCGCCTT ACCTGGGCATTAGCCAAGGACAAGGGAATTCCATTCGCTGATTTCCTGTCGCACATAAGCACCAGGACCTCCGGC TCTGCCCTGCCCCTCCGCGCCATCGCTTTCTGCGCCATAATAACAGCCATCACCTGCCTCATCAACATCGGCTCC AGCGCAGCCTTCAACGCCATGATCTCTCTGACAACAGCGGGACTGTTCTCATCATACGAGATTGCCATCGTGCTG ATACTCATCAAGAAGCTCAAGAACGAGCCGCTCCAATACGGCCCGTGGAAGATGGGTAGGCTGTGGGGAATCCTG ATCAATATTGGGTCGATCTGTTTCTTGACCATTACTATTTTCTTCTCATTCTTTCCCGAGGAGTTGCCCGTGACG CCGACGAATATGAATTGGTCGGTGGTGGTGTTTATGGGCGAATTCCTACTCGGGTTGGGGTGGTATTTGGTTAGG GGGAGGAAGATCTATCATGGGCCGGTCATGGATGTTCCGGTTGCTGTTGGAGAAGGGGGAGTGGTGGGCGGCGAT GGCGGAGATGACGAGTAG |
| Gene | >Ani_SJS100_1|g6567.t1 ATGTCTTTCAAACATGGAGAGATGGCAATCCAGGAGCTGGGCTCCCGGCAATACAAGGATCGTGATGATGAAGAC ATGGCAAAGTTTGGCAGGAAGCAGCGTTTCGAGGTGAGCACTCAATTTATGTCTGTGTCTCGTAACTAATGGAGG CAGAGAAATTTTGGCTTCCTGTCCATGCTGGGCTTCACAACCACGATGATGTGTACTTGGGAGGCGGTTCTCACG TGGGTGTCAACATTTCCATGATCGATGTCACCGGGCTGACTAGTATACAGCGCCAATCCGGCAGCCATGGTTGAC GGAGGACCAGCGACCCTCGTCTACGGGTTCATCTTCTGCTGGATTGGAGCTTTGTTAACAGCAGCCTCTCTCGCC GAAATGGCCTCGATGTACAGAGCCCCCTATACCACGCTCGAATTACACAACACTAAGTCAATTGTTATGCAGGGC TCCAACGTCAGCCGGTCAATACCACTGGGTATCCATACTCGCCCCTAAAGGCCAAGCTGTCTTCCTCAGCTGGGT AACCGGATGGTTGGACATGATCGGATGGTGGGCCAACACTGCATCGGGAGTGTATTTCGCCGCCACCGTCCTGCA GGGTCTTCTGGTGCTGAACTATGACGGGTATGACTTTCAACGCTGGCATGGCACACTGCTCATGTTCGCGGCGTT GGTAATCTGCCTTCTAGTCAACTCTTTTGGGGCACGGCTTCTCCCCAAGATCGAAGGGCTGATCCTCATTCTCCA TACCGCCGGCTTCCTAGCCATCCTGATCCCTCTGGTCCATCTGGCCCCGCATAAGAACGCCGAATTCGTCTTTGC GAACTTCACCAACACCTCGGGATGGAAGAACTCTGGTCTTACCTGGCTGATTGGGTTGATGGGGACAAATCTTCC TTTTATTGGTACGCTACAAAGTCCTCGTGTTGACGCTGTGGATAGACTAACCTGGTAACCTAGGATACGATGGCC CCTGTCATATGTGTAAGCCATTTACACCCACTTCCCAGCCAAAAATAATCTATATCTAACGAAACAACAGCAGAA GAAGTAGTCAACGCTTCCGTCATAGTCCCCTGGTGCATGATCGCGACTATCATGCTAAACGGCACTCTGGGCTTC GCCATGGTCCTAGCCTTCCTCTTCTGCGTAGGCGACCTGGACGCCGCCCTCGACAGCGCCACCGGATACGACTTC ATCGAAGTCTTCTTCAATGCGACAAAATCCCACGCCGGAACATCCGTAATGAGTGCCATCGTGATCGCCCTGACA ATTTGCGCCTCGTTTGGATTCCTTGCCTCCTCATCGCGCCTTACCTGGGCATTAGCCAAGGACAAGGGAATTCCA TTCGCTGATTTCCTGTCGCACGTACGAAGAGATCGCACCCCTCCGCACAAATACCATCAATACTAACATAGACTA AAACAGATAAGCACCAGGACCTCCGGCTCTGCCCTGCCCCTCCGCGCCATCGCTTTCTGCGCCATAATAACAGCC ATCACCTGCCTCATCAACATCGGCTCCAGCGCAGCCTTCAACGCCATGATCTCTCTGACAACAGCGGGACTGTTC TCATCATACGAGATTGCCATCGTGCTGATACTCATCAAGAAGCTCAAGAACGAGCCGCTCCAATACGGCCCGTGG AAGATGGGTAGGCTGTGGGGAATCCTGATCAATATTGGGTCGATCTGTTTCTTGACCATTACTATTTTCTTCTCA TTCTTTCCCGAGGAGTTGCCCGTGACGCCGACGAATATGAATTGGTCGGTGGTGGTGTTTATGGGCGAATTCCTA CTCGGGTTGGGGTGGTATTTGGTTAGGGGGAGGAAGATCTATCATGGGCCGGTCATGGATGTTCCGGTTGCTGTT GGAGAAGGGGGAGTGGTGGGCGGCGATGGCGGAGATGACGAGTAG |