Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6566.t1
Gene name
Locationscaffold_041:153878..155087
Strand+
Gene length (bp)1209
Transcript length (bp)1053
Coding sequence length (bp)1053
Protein length (aa) 351

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 67 22
3 87 109 22
4 122 144 22
5 176 198 22
6 205 227 22
7 242 264 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6566.t1
MASASYNAGPGILGLNWVAAGIATIIMLLRLIAKHRIRNLSWDDAIMILAYTLAIASSVLITIAISHGYGRHAYE
LDRSDRVLTAKLYTIFQCVSILSTGTGRLAFVLYLLPIFRHKYLMGHILWLIFALQLISNYVSPVTILVRCADIR
AIWDITVKSKCWDPKILITYSYVQCTINTATDLYLAIFPAYTLWSLNLKRRTKTILIILMGLGLVAMVGSIMRII
SLPSLSIIDDQSAATNRLTIWALLECYLVITTASIPCIRTLVMDSVRLLVNSSRSRSGREADSRRTRQNTWGDYP
ISRSYRVAVGDDVEDRRHMLGDVELGRYGHSGISKLVEVTVAEEAIPKWI*
Coding >Ani_SJS100_1|g6566.t1
ATGGCTTCTGCATCCTACAATGCTGGCCCTGGCATTCTGGGCCTCAATTGGGTAGCAGCTGGAATTGCCACCATC
ATCATGCTGTTGAGGCTCATTGCGAAGCATCGTATTCGCAACCTTTCTTGGGACGATGCAATTATGATCCTTGCT
TATACTTTGGCTATTGCGTCTTCCGTCCTGATCACTATAGCAATCTCCCACGGATACGGACGACATGCTTACGAA
CTCGATCGATCGGACCGCGTCTTGACTGCGAAACTTTATACAATTTTCCAATGCGTCTCGATTCTCAGTACAGGA
ACGGGAAGGCTGGCTTTCGTGTTATACTTGCTGCCAATATTCCGACACAAATACCTCATGGGACACATCTTGTGG
CTTATATTCGCGCTTCAGCTCATTTCCAATTACGTCAGTCCTGTGACTATCCTGGTCCGATGCGCTGACATTCGC
GCTATATGGGACATTACCGTCAAGAGCAAATGCTGGGATCCAAAAATTCTGATAACTTATAGCTACGTGCAATGC
ACTATCAATACAGCAACCGACCTTTATCTCGCAATATTTCCTGCATACACCTTGTGGAGTTTGAATCTCAAACGG
CGGACGAAGACAATTCTCATCATACTTATGGGCCTGGGGCTAGTCGCCATGGTAGGATCAATCATGCGGATTATA
AGCCTTCCCTCCCTCTCCATCATCGACGATCAATCTGCCGCAACGAACCGTCTGACCATCTGGGCCTTGCTAGAA
TGTTACTTGGTCATCACTACGGCATCGATTCCATGTATTCGGACCTTGGTGATGGACTCTGTACGGCTACTAGTT
AACAGCAGTCGATCCCGCTCAGGGAGAGAAGCAGATAGTAGGAGGACAAGGCAGAACACTTGGGGCGATTATCCC
ATCTCGCGAAGCTACCGTGTAGCAGTGGGAGATGATGTCGAGGACAGGCGGCATATGCTGGGCGATGTTGAGTTG
GGGCGGTATGGACATAGTGGAATAAGCAAGTTGGTCGAGGTGACGGTTGCAGAAGAGGCGATACCAAAATGGATA
TAA
Transcript >Ani_SJS100_1|g6566.t1
ATGGCTTCTGCATCCTACAATGCTGGCCCTGGCATTCTGGGCCTCAATTGGGTAGCAGCTGGAATTGCCACCATC
ATCATGCTGTTGAGGCTCATTGCGAAGCATCGTATTCGCAACCTTTCTTGGGACGATGCAATTATGATCCTTGCT
TATACTTTGGCTATTGCGTCTTCCGTCCTGATCACTATAGCAATCTCCCACGGATACGGACGACATGCTTACGAA
CTCGATCGATCGGACCGCGTCTTGACTGCGAAACTTTATACAATTTTCCAATGCGTCTCGATTCTCAGTACAGGA
ACGGGAAGGCTGGCTTTCGTGTTATACTTGCTGCCAATATTCCGACACAAATACCTCATGGGACACATCTTGTGG
CTTATATTCGCGCTTCAGCTCATTTCCAATTACGTCAGTCCTGTGACTATCCTGGTCCGATGCGCTGACATTCGC
GCTATATGGGACATTACCGTCAAGAGCAAATGCTGGGATCCAAAAATTCTGATAACTTATAGCTACGTGCAATGC
ACTATCAATACAGCAACCGACCTTTATCTCGCAATATTTCCTGCATACACCTTGTGGAGTTTGAATCTCAAACGG
CGGACGAAGACAATTCTCATCATACTTATGGGCCTGGGGCTAGTCGCCATGGTAGGATCAATCATGCGGATTATA
AGCCTTCCCTCCCTCTCCATCATCGACGATCAATCTGCCGCAACGAACCGTCTGACCATCTGGGCCTTGCTAGAA
TGTTACTTGGTCATCACTACGGCATCGATTCCATGTATTCGGACCTTGGTGATGGACTCTGTACGGCTACTAGTT
AACAGCAGTCGATCCCGCTCAGGGAGAGAAGCAGATAGTAGGAGGACAAGGCAGAACACTTGGGGCGATTATCCC
ATCTCGCGAAGCTACCGTGTAGCAGTGGGAGATGATGTCGAGGACAGGCGGCATATGCTGGGCGATGTTGAGTTG
GGGCGGTATGGACATAGTGGAATAAGCAAGTTGGTCGAGGTGACGGTTGCAGAAGAGGCGATACCAAAATGGATA
TAA
Gene >Ani_SJS100_1|g6566.t1
ATGGCTTCTGCATCCTACAATGCTGGCCCTGGCATTCTGGGCCTCAATTGGGTAGCAGCTGGAATTGCCACCATC
ATCATGCTGTTGAGGCTCATTGCGAAGCATCGTATTCGCAACCTTTCTTGGGACGATGCAATTATGATCCTTGCT
TATGTATGGAACCTTTTGGGAAGATTATACGACTAAGCTTACCATGGCAGACTTTGGCTATTGCGTCTTCCGTCC
TGATCACTATAGCAATCTCCCACGGATACGGACGACATGCTTACGAACTCGATCGATCGGACCGCGTCTTGACTG
CGAAACTTTATACAATTTTCCAATGCGTCTCGATTCTCAGTACAGGAACGGGAAGGCTGGCTTTCGTGTTATACT
TGCTGCCAATATTCCGACACAAATACCTCATGGGACACATCTTGTGGCTTATATTCGCGCTTCAGCTCATTTCCA
ATTACGTCAGTCCTGTGACTATCCTGGTCCGATGCGCTGACATTCGCGCTATATGGGACATTACCGTCAAGAGCA
AATGCTGGGATCCAAAAATTCTGATAACTTATAGCTACGTGCAATGCAGTAAGTCCATATGCCGAATAATGTTCC
ATTGGATAGCGCTAATCTCGGAAATCACAGCTATCAATACAGCAACCGACCTTTATCTCGCAATATTTCCTGCAT
ACACCTTGTGGAGTTTGAATCTCAAACGGCGGACGAAGACAATTCTCATCATACTTATGGGCCTGGGGCTAGTGT
ATGTACGATATCTGTCGTTGAGCCCAGCACAACTCTAACCGTTTATCCAGCGCCATGGTAGGATCAATCATGCGG
ATTATAAGCCTTCCCTCCCTCTCCATCATCGACGATCAATCTGCCGCAACGAACCGTCTGACCATCTGGGCCTTG
CTAGAATGTTACTTGGTCATCACTACGGCATCGATTCCATGTATTCGGACCTTGGTGATGGACTCTGTACGGCTA
CTAGTTAACAGCAGTCGATCCCGCTCAGGGAGAGAAGCAGATAGTAGGAGGACAAGGCAGAACACTTGGGGCGAT
TATCCCATCTCGCGAAGCTACCGTGTAGCAGTGGGAGATGATGTCGAGGACAGGCGGCATATGCTGGGCGATGTT
GAGTTGGGGCGGTATGGACATAGTGGAATAAGCAAGTTGGTCGAGGTGACGGTTGCAGAAGAGGCGATACCAAAA
TGGATATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail