© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6557.t1 |
| Gene name | |
| Location | scaffold_041:128319..129522 |
| Strand | + |
| Gene length (bp) | 1203 |
| Transcript length (bp) | 1056 |
| Coding sequence length (bp) | 1056 |
| Protein length (aa) | 352 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 50 | 72 | 22 |
| 3 | 85 | 107 | 22 |
| 4 | 127 | 149 | 22 |
| 5 | 206 | 228 | 22 |
| 6 | 243 | 265 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6557.t1 MAVSPLDVPNRGPEFVKVTAVLTCIAFVLVVCRLTWKGYVQGRFAVDDGIIAFSMGMQIVNTVMGGLACHYAFGR HKADIVRTGGNVVLALKYFWLFQIFYKLVLCLNKLSFLTFYLRVFPNRIFRIICWITIALVLASTFGFVIATIFQ CLPVRASWYKHIPKKCVQNAPFRWSWAGYNTAMDIWVCLMPLPVLAQLQLDRIRKIGVILVFCMGLFVCVTSIIR MWAMEKSTTTTDPTWGSFDALLWSAIEASTGIICACLPFLKHPIQKVLPGLFGSLSTGSRKSRSRTRPSYRMSRL GSRSGNGTRDVDADIGGDGDDTESIGSQGPIAKNQIIVKTGISMHSEAAYP* |
| Coding | >Ani_SJS100_1|g6557.t1 ATGGCGGTTAGTCCGCTGGATGTTCCGAATAGAGGCCCCGAATTCGTCAAAGTAACCGCCGTCTTGACATGCATT GCGTTCGTCCTGGTGGTCTGTCGCCTGACATGGAAGGGCTATGTCCAAGGCCGATTCGCCGTAGACGATGGGATC ATTGCATTCTCAATGGGTATGCAGATCGTCAACACCGTTATGGGTGGTTTAGCCTGCCACTACGCCTTTGGCCGA CACAAAGCCGATATCGTCAGAACGGGCGGTAACGTCGTCCTTGCTCTGAAGTATTTCTGGCTCTTCCAGATCTTC TACAAACTCGTCCTATGCCTCAACAAACTTTCCTTTCTCACCTTCTACCTCCGGGTCTTTCCCAACCGCATCTTC CGCATAATCTGTTGGATTACCATCGCTCTCGTTCTCGCTAGCACCTTTGGCTTCGTCATAGCCACCATCTTCCAA TGCCTCCCCGTTCGCGCCAGCTGGTATAAGCACATACCCAAGAAGTGTGTTCAAAATGCCCCATTTCGTTGGTCC TGGGCGGGCTATAATACTGCAATGGACATTTGGGTGTGTCTGATGCCACTGCCGGTGTTGGCGCAGCTACAGCTT GATCGGATCAGGAAAATCGGAGTCATACTGGTATTCTGTATGGGGTTGTTTGTCTGTGTGACGAGTATCATTCGC ATGTGGGCGATGGAGAAAAGTACGACCACTACGGATCCGACTTGGGGATCGTTTGATGCGTTGTTGTGGAGTGCC ATTGAGGCCAGTACGGGAATCATTTGTGCTTGCTTGCCGTTCCTAAAACACCCCATTCAGAAGGTCTTGCCTGGC CTGTTTGGGTCATTGTCGACTGGGTCCAGGAAGAGTCGGAGTCGGACGAGGCCGAGTTATCGGATGAGTCGATTG GGGTCGCGGTCGGGGAACGGCACGCGGGATGTTGACGCTGATATTGGCGGAGATGGAGATGATACAGAGAGCATT GGAAGCCAGGGTCCTATTGCGAAGAACCAGATTATCGTGAAGACGGGCATTTCCATGCACAGTGAAGCGGCATAT CCATGA |
| Transcript | >Ani_SJS100_1|g6557.t1 ATGGCGGTTAGTCCGCTGGATGTTCCGAATAGAGGCCCCGAATTCGTCAAAGTAACCGCCGTCTTGACATGCATT GCGTTCGTCCTGGTGGTCTGTCGCCTGACATGGAAGGGCTATGTCCAAGGCCGATTCGCCGTAGACGATGGGATC ATTGCATTCTCAATGGGTATGCAGATCGTCAACACCGTTATGGGTGGTTTAGCCTGCCACTACGCCTTTGGCCGA CACAAAGCCGATATCGTCAGAACGGGCGGTAACGTCGTCCTTGCTCTGAAGTATTTCTGGCTCTTCCAGATCTTC TACAAACTCGTCCTATGCCTCAACAAACTTTCCTTTCTCACCTTCTACCTCCGGGTCTTTCCCAACCGCATCTTC CGCATAATCTGTTGGATTACCATCGCTCTCGTTCTCGCTAGCACCTTTGGCTTCGTCATAGCCACCATCTTCCAA TGCCTCCCCGTTCGCGCCAGCTGGTATAAGCACATACCCAAGAAGTGTGTTCAAAATGCCCCATTTCGTTGGTCC TGGGCGGGCTATAATACTGCAATGGACATTTGGGTGTGTCTGATGCCACTGCCGGTGTTGGCGCAGCTACAGCTT GATCGGATCAGGAAAATCGGAGTCATACTGGTATTCTGTATGGGGTTGTTTGTCTGTGTGACGAGTATCATTCGC ATGTGGGCGATGGAGAAAAGTACGACCACTACGGATCCGACTTGGGGATCGTTTGATGCGTTGTTGTGGAGTGCC ATTGAGGCCAGTACGGGAATCATTTGTGCTTGCTTGCCGTTCCTAAAACACCCCATTCAGAAGGTCTTGCCTGGC CTGTTTGGGTCATTGTCGACTGGGTCCAGGAAGAGTCGGAGTCGGACGAGGCCGAGTTATCGGATGAGTCGATTG GGGTCGCGGTCGGGGAACGGCACGCGGGATGTTGACGCTGATATTGGCGGAGATGGAGATGATACAGAGAGCATT GGAAGCCAGGGTCCTATTGCGAAGAACCAGATTATCGTGAAGACGGGCATTTCCATGCACAGTGAAGCGGCATAT CCATGA |
| Gene | >Ani_SJS100_1|g6557.t1 ATGGCGGTTAGTCCGCTGGATGTTCCGAATAGAGGCCCCGAATTCGTCAAAGTAACCGCCGTCTTGACATGCATT GCGTTCGTCCTGGTGGTCTGTCGCCTGACATGGAAGGGCTATGTCCAAGGCCGATTCGCCGTAGACGATGGGATC ATTGCATTCTCAATGGTAGGCTATCCTGAGTCCCAATACTAAACGTTTACTCACCCACAGCCAGGGTATGCAGAT CGTCAACACCGTTATGGGTGGTTTAGGTATGATTTTCCAGAATGTAGACGCCATCAATACTAAACTCTGTCCAGC CTGCCACTACGCCTTTGGCCGACACAAAGCCGATATCGTCAGAACGGGCGGTAACGTCGTCCTTGCTCTGAAGGT GCGAGATGTGTTCACTGAATCCATCACACTTAGCTAACTTGCGGCAAGTATTTCTGGCTCTTCCAGATCTTCTAC AAACTCGTCCTATGCCTCAACAAACTTTCCTTTCTCACCTTCTACCTCCGGGTCTTTCCCAACCGCATCTTCCGC ATAATCTGTTGGATTACCATCGCTCTCGTTCTCGCTAGCACCTTTGGCTTCGTCATAGCCACCATCTTCCAATGC CTCCCCGTTCGCGCCAGCTGGTATAAGCACATACCCAAGAAGTGTGTTCAAAATGCCCCATTTCGTTGGTCCTGG GCGGGCTATAATACTGCAATGGACATTTGGGTGTGTCTGATGCCACTGCCGGTGTTGGCGCAGCTACAGCTTGAT CGGATCAGGAAAATCGGAGTCATACTGGTATTCTGTATGGGGTTGTTTGTCTGTGTGACGAGTATCATTCGCATG TGGGCGATGGAGAAAAGTACGACCACTACGGATCCGACTTGGGGATCGTTTGATGCGTTGTTGTGGAGTGCCATT GAGGCCAGTACGGGAATCATTTGTGCTTGCTTGCCGTTCCTAAAACACCCCATTCAGAAGGTCTTGCCTGGCCTG TTTGGGTCATTGTCGACTGGGTCCAGGAAGAGTCGGAGTCGGACGAGGCCGAGTTATCGGATGAGTCGATTGGGG TCGCGGTCGGGGAACGGCACGCGGGATGTTGACGCTGATATTGGCGGAGATGGAGATGATACAGAGAGCATTGGA AGCCAGGGTCCTATTGCGAAGAACCAGATTATCGTGAAGACGGGCATTTCCATGCACAGTGAAGCGGCATATCCA TGA |