© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6550.t1 |
| Gene name | |
| Location | scaffold_041:115106..115943 |
| Strand | + |
| Gene length (bp) | 837 |
| Transcript length (bp) | 741 |
| Coding sequence length (bp) | 741 |
| Protein length (aa) | 247 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 28 | 18 |
| 2 | 33 | 55 | 22 |
| 3 | 65 | 87 | 22 |
| 4 | 100 | 122 | 22 |
| 5 | 132 | 154 | 22 |
| 6 | 167 | 189 | 22 |
| 7 | 204 | 226 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6550.t1 MSATEHLDVANLAVYALFSLPAIYCLVVHGKHGLLGWAYVLVMCGLRIAGSAMSLNAIHRNEINTTAAILNGIGL SPLLMAAMGLLHEANHSIHRFLPPFLNLWGFLITHMVVAGGIGLAAASSGNETLLRVGMIVFATGWTLVAVLIWF SYGANAHSRRLGEERQLLFAITVAMPLIGVRIVYAIVTAFTSSNLEGGSLAVRVIFGTIPEYLVMLIYVGVGIVT RNLVRSRVEYIQPMNQSQVPI* |
| Coding | >Ani_SJS100_1|g6550.t1 ATGTCCGCAACTGAACACCTTGACGTAGCCAACCTGGCCGTCTATGCTCTCTTCTCTCTTCCAGCGATCTACTGC CTTGTCGTGCATGGCAAACATGGTCTACTCGGCTGGGCTTACGTTCTCGTCATGTGTGGTCTGCGTATAGCCGGC AGCGCAATGTCCCTCAACGCTATTCACCGCAACGAAATCAACACGACGGCCGCAATCCTCAACGGCATCGGGCTA TCCCCTCTTCTCATGGCTGCCATGGGCCTTCTGCATGAAGCAAACCACTCCATCCATCGCTTCCTCCCTCCTTTC TTGAACCTCTGGGGGTTCCTCATCACACACATGGTTGTCGCAGGCGGAATTGGCCTTGCTGCGGCTAGCAGTGGG AACGAGACACTCCTTCGCGTGGGAATGATTGTCTTTGCGACGGGATGGACGTTGGTGGCTGTTCTGATTTGGTTC TCGTATGGGGCTAATGCCCACAGCCGTCGACTGGGAGAAGAGAGACAGCTTCTTTTTGCTATCACTGTCGCTATG CCTTTGATTGGTGTTCGCATCGTCTATGCCATCGTCACTGCATTCACCAGCTCCAATCTTGAAGGTGGCAGTCTA GCCGTGCGCGTCATCTTCGGTACCATCCCCGAGTACCTCGTCATGCTCATCTACGTGGGAGTTGGTATCGTCACC AGAAACCTGGTGCGCAGTCGGGTTGAATATATCCAGCCGATGAACCAGTCGCAAGTGCCTATCTAG |
| Transcript | >Ani_SJS100_1|g6550.t1 ATGTCCGCAACTGAACACCTTGACGTAGCCAACCTGGCCGTCTATGCTCTCTTCTCTCTTCCAGCGATCTACTGC CTTGTCGTGCATGGCAAACATGGTCTACTCGGCTGGGCTTACGTTCTCGTCATGTGTGGTCTGCGTATAGCCGGC AGCGCAATGTCCCTCAACGCTATTCACCGCAACGAAATCAACACGACGGCCGCAATCCTCAACGGCATCGGGCTA TCCCCTCTTCTCATGGCTGCCATGGGCCTTCTGCATGAAGCAAACCACTCCATCCATCGCTTCCTCCCTCCTTTC TTGAACCTCTGGGGGTTCCTCATCACACACATGGTTGTCGCAGGCGGAATTGGCCTTGCTGCGGCTAGCAGTGGG AACGAGACACTCCTTCGCGTGGGAATGATTGTCTTTGCGACGGGATGGACGTTGGTGGCTGTTCTGATTTGGTTC TCGTATGGGGCTAATGCCCACAGCCGTCGACTGGGAGAAGAGAGACAGCTTCTTTTTGCTATCACTGTCGCTATG CCTTTGATTGGTGTTCGCATCGTCTATGCCATCGTCACTGCATTCACCAGCTCCAATCTTGAAGGTGGCAGTCTA GCCGTGCGCGTCATCTTCGGTACCATCCCCGAGTACCTCGTCATGCTCATCTACGTGGGAGTTGGTATCGTCACC AGAAACCTGGTGCGCAGTCGGGTTGAATATATCCAGCCGATGAACCAGTCGCAAGTGCCTATCTAG |
| Gene | >Ani_SJS100_1|g6550.t1 ATGTCCGCAACTGAACACCTTGACGTAGCCAACCTGGCCGTCTATGCTCTCTTCTCTCTTCCAGCGATCTACTGC CTTGTCGTGCATGGCAAACATGGTCTACTCGGCTGGGCTTACGTTCTCGTCATGTGTGGTCTGCGTATAGCCGGC AGCGCAATGTCCCTCAACGCTATTCACCGCAACGAAATCAACACGACGGCCGCAATCCTCAACGGCATCGGGCTA TCCCCTCTTCTCATGGCTGCCATGGGCCTTCTGCATGAAGCGTATGTATTTAGTTTATGTCTTTACTTCACAGCT AACCGCCTCATAGAAACCACTCCATCCATCGCTTCCTCCCTCCTTTCTTGAACCTCTGGGGGTTCCTCATCACAC ACATGGTTGTCGCAGGCGGAATTGGCCTTGCTGCGGCTAGCAGTGGGAACGAGACACTCCTTCGCGTGGGAATGA TTGTCTTTGCGACGGGATGGACGTTGGTGGCTGTTCTGATTTGGTTCTCGTATGGGGCTAATGCCCACAGCCGTC GACTGGGAGAAGAGAGACAGGTTAGTATCTTCTCATCTTCTATAAAAATCAAATCACTAACAGACACAGCTTCTT TTTGCTATCACTGTCGCTATGCCTTTGATTGGTGTTCGCATCGTCTATGCCATCGTCACTGCATTCACCAGCTCC AATCTTGAAGGTGGCAGTCTAGCCGTGCGCGTCATCTTCGGTACCATCCCCGAGTACCTCGTCATGCTCATCTAC GTGGGAGTTGGTATCGTCACCAGAAACCTGGTGCGCAGTCGGGTTGAATATATCCAGCCGATGAACCAGTCGCAA GTGCCTATCTAG |