Protein ID | Ani_SJS100_1|g6543.t1 |
Gene name | |
Location | scaffold_041:95254..97243 |
Strand | - |
Gene length (bp) | 1989 |
Transcript length (bp) | 1989 |
Coding sequence length (bp) | 1989 |
Protein length (aa) | 663 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03441 | FAD_binding_7 | FAD binding domain of DNA photolyase | 1.2E-35 | 334 | 456 |
PF03441 | FAD_binding_7 | FAD binding domain of DNA photolyase | 2.8E-29 | 478 | 587 |
PF00875 | DNA_photolyase | DNA photolyase | 9.1E-41 | 9 | 174 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6543.t1 MPPQSAPTVIFWHRTDLRLHDNPALQAALSLNPSTFIPIFTWDPHYAYQVRVGPNRWRFLLECQNDLSQSYRKLN PKQKLWVVREAPQTVFPKLFKAWGATHLVFESDTDGYAWERDETIRKLAKEAGVEVIVKSGRTLFDSDEVVKQNK GEPTMSIHQVEKAIEQINNGVPDRPVDAPETIPDPLGEEKMKDISGLEHEVPDQEDDINAAHRTKHSDNQYKNIA GPKDDFSVPTLDELSIDPSQATSPHHGGESIALEMLTTYLQQNEDYIATFEKPKTSPAAFHPQATTLLSPHLHFG SLSVRKFWHDVQDTLQQRESAHKPTSDLPTNLPGQLLFREMFFAAQAALGPVYAQTRGNKIVRFVPWHLQSNHDK ETGLVDRTYTVDDEQAEVWFRRWKEGRTGFPWIDALMRQLKNEGWIHHLGRHSVACFLTRGGCYVHWERGAEVFE EWLIDRMYIYFILWNYEGDDANRSETDETASNVGNWMWLSCTAFFTQYNRCYSPVAFGKKWDPEGRFVRHYIPEL EHYDKKYIYEPWKAPLEDQKRWKCRVTGDGMVEKDEETGLRAYPEPMFDFDERRQTCIAQMKEAYEVHLMGNDEK VMDGSWKEIFEYEVKDGRVVDETNVKVDGDGGHRKGGEKRGRQAGDQEGEDEDGGHGLKKKK* |
Coding | >Ani_SJS100_1|g6543.t1 ATGCCCCCCCAATCCGCACCCACCGTCATATTCTGGCACCGCACCGACCTCCGCCTGCACGATAACCCAGCCCTG CAGGCTGCTCTCTCCCTCAACCCATCGACCTTCATCCCGATCTTCACCTGGGACCCGCACTATGCGTATCAGGTC CGCGTAGGCCCAAATCGCTGGCGCTTCCTGCTGGAATGCCAGAATGACCTCTCACAATCCTACCGCAAGCTGAAC CCGAAGCAGAAGCTCTGGGTGGTTCGCGAAGCACCTCAAACCGTTTTCCCTAAGTTATTCAAAGCATGGGGTGCG ACGCATCTCGTCTTTGAGAGTGACACAGATGGATATGCATGGGAGCGCGATGAGACTATTAGGAAGTTAGCGAAG GAGGCAGGGGTGGAGGTTATAGTGAAGTCTGGACGGACATTGTTCGATTCCGACGAGGTGGTTAAACAGAACAAG GGCGAGCCGACAATGAGTATTCATCAGGTGGAGAAGGCGATTGAGCAGATAAACAATGGGGTGCCGGATCGGCCT GTTGACGCGCCGGAAACGATACCTGATCCGTTGGGGGAGGAGAAGATGAAGGATATAAGTGGGCTTGAGCATGAG GTTCCAGATCAGGAGGATGACATAAATGCTGCGCATCGAACCAAGCATAGCGACAATCAGTACAAGAACATAGCA GGTCCCAAGGACGACTTCTCCGTTCCCACGCTGGATGAACTCTCCATCGATCCCAGCCAAGCAACAAGCCCCCAT CACGGCGGCGAATCCATCGCGCTGGAGATGCTGACCACCTACCTGCAACAAAACGAAGACTACATCGCCACATTC GAAAAGCCCAAGACTTCCCCCGCGGCCTTCCACCCACAAGCTACAACCCTCCTCTCGCCCCATCTGCACTTCGGC TCTCTCTCCGTGCGCAAATTCTGGCATGACGTGCAGGATACCCTCCAGCAGCGCGAGTCAGCCCACAAGCCTACC TCAGACCTCCCTACTAATCTCCCTGGACAACTCCTCTTCCGGGAAATGTTCTTCGCTGCGCAAGCAGCTCTAGGA CCAGTGTATGCGCAGACGCGTGGGAACAAGATCGTGCGGTTCGTTCCGTGGCATTTACAATCTAATCATGATAAG GAGACGGGATTAGTTGACAGGACGTATACGGTTGACGATGAGCAAGCGGAGGTGTGGTTCCGACGGTGGAAGGAA GGGCGGACGGGATTTCCGTGGATCGATGCGTTGATGAGACAGCTGAAGAATGAGGGGTGGATTCATCATCTAGGG AGACATAGTGTGGCGTGCTTTTTGACAAGGGGGGGTTGCTATGTGCATTGGGAGAGGGGGGCGGAGGTGTTTGAG GAGTGGTTGATTGATCGTATGTATATCTATTTCATTCTGTGGAATTATGAAGGTGATGATGCTAATAGGAGCGAA ACAGATGAAACTGCTTCTAATGTTGGGAACTGGATGTGGTTATCCTGCACGGCGTTCTTCACACAGTATAATAGA TGCTATTCGCCGGTGGCATTTGGGAAGAAGTGGGATCCAGAAGGGCGGTTCGTAAGACACTATATTCCGGAGCTG GAACACTATGATAAGAAGTATATCTATGAGCCGTGGAAGGCGCCGTTAGAAGATCAGAAGCGGTGGAAGTGTCGG GTAACTGGGGATGGGATGGTCGAGAAGGATGAAGAGACTGGGTTAAGAGCTTACCCGGAGCCGATGTTCGACTTT GATGAGAGGAGACAGACGTGTATTGCGCAGATGAAGGAGGCATATGAGGTGCATTTAATGGGGAATGATGAGAAG GTTATGGATGGGTCGTGGAAGGAGATATTTGAGTACGAGGTTAAGGATGGGAGGGTAGTGGATGAGACGAATGTG AAGGTGGATGGGGACGGTGGTCATCGTAAAGGAGGAGAGAAACGGGGGCGACAAGCAGGAGATCAGGAGGGTGAA GATGAAGATGGAGGACATGGTTTGAAGAAGAAGAAATAG |
Transcript | >Ani_SJS100_1|g6543.t1 ATGCCCCCCCAATCCGCACCCACCGTCATATTCTGGCACCGCACCGACCTCCGCCTGCACGATAACCCAGCCCTG CAGGCTGCTCTCTCCCTCAACCCATCGACCTTCATCCCGATCTTCACCTGGGACCCGCACTATGCGTATCAGGTC CGCGTAGGCCCAAATCGCTGGCGCTTCCTGCTGGAATGCCAGAATGACCTCTCACAATCCTACCGCAAGCTGAAC CCGAAGCAGAAGCTCTGGGTGGTTCGCGAAGCACCTCAAACCGTTTTCCCTAAGTTATTCAAAGCATGGGGTGCG ACGCATCTCGTCTTTGAGAGTGACACAGATGGATATGCATGGGAGCGCGATGAGACTATTAGGAAGTTAGCGAAG GAGGCAGGGGTGGAGGTTATAGTGAAGTCTGGACGGACATTGTTCGATTCCGACGAGGTGGTTAAACAGAACAAG GGCGAGCCGACAATGAGTATTCATCAGGTGGAGAAGGCGATTGAGCAGATAAACAATGGGGTGCCGGATCGGCCT GTTGACGCGCCGGAAACGATACCTGATCCGTTGGGGGAGGAGAAGATGAAGGATATAAGTGGGCTTGAGCATGAG GTTCCAGATCAGGAGGATGACATAAATGCTGCGCATCGAACCAAGCATAGCGACAATCAGTACAAGAACATAGCA GGTCCCAAGGACGACTTCTCCGTTCCCACGCTGGATGAACTCTCCATCGATCCCAGCCAAGCAACAAGCCCCCAT CACGGCGGCGAATCCATCGCGCTGGAGATGCTGACCACCTACCTGCAACAAAACGAAGACTACATCGCCACATTC GAAAAGCCCAAGACTTCCCCCGCGGCCTTCCACCCACAAGCTACAACCCTCCTCTCGCCCCATCTGCACTTCGGC TCTCTCTCCGTGCGCAAATTCTGGCATGACGTGCAGGATACCCTCCAGCAGCGCGAGTCAGCCCACAAGCCTACC TCAGACCTCCCTACTAATCTCCCTGGACAACTCCTCTTCCGGGAAATGTTCTTCGCTGCGCAAGCAGCTCTAGGA CCAGTGTATGCGCAGACGCGTGGGAACAAGATCGTGCGGTTCGTTCCGTGGCATTTACAATCTAATCATGATAAG GAGACGGGATTAGTTGACAGGACGTATACGGTTGACGATGAGCAAGCGGAGGTGTGGTTCCGACGGTGGAAGGAA GGGCGGACGGGATTTCCGTGGATCGATGCGTTGATGAGACAGCTGAAGAATGAGGGGTGGATTCATCATCTAGGG AGACATAGTGTGGCGTGCTTTTTGACAAGGGGGGGTTGCTATGTGCATTGGGAGAGGGGGGCGGAGGTGTTTGAG GAGTGGTTGATTGATCGTATGTATATCTATTTCATTCTGTGGAATTATGAAGGTGATGATGCTAATAGGAGCGAA ACAGATGAAACTGCTTCTAATGTTGGGAACTGGATGTGGTTATCCTGCACGGCGTTCTTCACACAGTATAATAGA TGCTATTCGCCGGTGGCATTTGGGAAGAAGTGGGATCCAGAAGGGCGGTTCGTAAGACACTATATTCCGGAGCTG GAACACTATGATAAGAAGTATATCTATGAGCCGTGGAAGGCGCCGTTAGAAGATCAGAAGCGGTGGAAGTGTCGG GTAACTGGGGATGGGATGGTCGAGAAGGATGAAGAGACTGGGTTAAGAGCTTACCCGGAGCCGATGTTCGACTTT GATGAGAGGAGACAGACGTGTATTGCGCAGATGAAGGAGGCATATGAGGTGCATTTAATGGGGAATGATGAGAAG GTTATGGATGGGTCGTGGAAGGAGATATTTGAGTACGAGGTTAAGGATGGGAGGGTAGTGGATGAGACGAATGTG AAGGTGGATGGGGACGGTGGTCATCGTAAAGGAGGAGAGAAACGGGGGCGACAAGCAGGAGATCAGGAGGGTGAA GATGAAGATGGAGGACATGGTTTGAAGAAGAAGAAATAG |
Gene | >Ani_SJS100_1|g6543.t1 ATGCCCCCCCAATCCGCACCCACCGTCATATTCTGGCACCGCACCGACCTCCGCCTGCACGATAACCCAGCCCTG CAGGCTGCTCTCTCCCTCAACCCATCGACCTTCATCCCGATCTTCACCTGGGACCCGCACTATGCGTATCAGGTC CGCGTAGGCCCAAATCGCTGGCGCTTCCTGCTGGAATGCCAGAATGACCTCTCACAATCCTACCGCAAGCTGAAC CCGAAGCAGAAGCTCTGGGTGGTTCGCGAAGCACCTCAAACCGTTTTCCCTAAGTTATTCAAAGCATGGGGTGCG ACGCATCTCGTCTTTGAGAGTGACACAGATGGATATGCATGGGAGCGCGATGAGACTATTAGGAAGTTAGCGAAG GAGGCAGGGGTGGAGGTTATAGTGAAGTCTGGACGGACATTGTTCGATTCCGACGAGGTGGTTAAACAGAACAAG GGCGAGCCGACAATGAGTATTCATCAGGTGGAGAAGGCGATTGAGCAGATAAACAATGGGGTGCCGGATCGGCCT GTTGACGCGCCGGAAACGATACCTGATCCGTTGGGGGAGGAGAAGATGAAGGATATAAGTGGGCTTGAGCATGAG GTTCCAGATCAGGAGGATGACATAAATGCTGCGCATCGAACCAAGCATAGCGACAATCAGTACAAGAACATAGCA GGTCCCAAGGACGACTTCTCCGTTCCCACGCTGGATGAACTCTCCATCGATCCCAGCCAAGCAACAAGCCCCCAT CACGGCGGCGAATCCATCGCGCTGGAGATGCTGACCACCTACCTGCAACAAAACGAAGACTACATCGCCACATTC GAAAAGCCCAAGACTTCCCCCGCGGCCTTCCACCCACAAGCTACAACCCTCCTCTCGCCCCATCTGCACTTCGGC TCTCTCTCCGTGCGCAAATTCTGGCATGACGTGCAGGATACCCTCCAGCAGCGCGAGTCAGCCCACAAGCCTACC TCAGACCTCCCTACTAATCTCCCTGGACAACTCCTCTTCCGGGAAATGTTCTTCGCTGCGCAAGCAGCTCTAGGA CCAGTGTATGCGCAGACGCGTGGGAACAAGATCGTGCGGTTCGTTCCGTGGCATTTACAATCTAATCATGATAAG GAGACGGGATTAGTTGACAGGACGTATACGGTTGACGATGAGCAAGCGGAGGTGTGGTTCCGACGGTGGAAGGAA GGGCGGACGGGATTTCCGTGGATCGATGCGTTGATGAGACAGCTGAAGAATGAGGGGTGGATTCATCATCTAGGG AGACATAGTGTGGCGTGCTTTTTGACAAGGGGGGGTTGCTATGTGCATTGGGAGAGGGGGGCGGAGGTGTTTGAG GAGTGGTTGATTGATCGTATGTATATCTATTTCATTCTGTGGAATTATGAAGGTGATGATGCTAATAGGAGCGAA ACAGATGAAACTGCTTCTAATGTTGGGAACTGGATGTGGTTATCCTGCACGGCGTTCTTCACACAGTATAATAGA TGCTATTCGCCGGTGGCATTTGGGAAGAAGTGGGATCCAGAAGGGCGGTTCGTAAGACACTATATTCCGGAGCTG GAACACTATGATAAGAAGTATATCTATGAGCCGTGGAAGGCGCCGTTAGAAGATCAGAAGCGGTGGAAGTGTCGG GTAACTGGGGATGGGATGGTCGAGAAGGATGAAGAGACTGGGTTAAGAGCTTACCCGGAGCCGATGTTCGACTTT GATGAGAGGAGACAGACGTGTATTGCGCAGATGAAGGAGGCATATGAGGTGCATTTAATGGGGAATGATGAGAAG GTTATGGATGGGTCGTGGAAGGAGATATTTGAGTACGAGGTTAAGGATGGGAGGGTAGTGGATGAGACGAATGTG AAGGTGGATGGGGACGGTGGTCATCGTAAAGGAGGAGAGAAACGGGGGCGACAAGCAGGAGATCAGGAGGGTGAA GATGAAGATGGAGGACATGGTTTGAAGAAGAAGAAATAG |