Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6542.t1
Gene name
Locationscaffold_041:93184..94308
Strand-
Gene length (bp)1124
Transcript length (bp)1023
Coding sequence length (bp)1023
Protein length (aa) 341

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13391 HNH_2 HNH endonuclease 7.4E-07 151 231

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6542.t1
MSTSTPTSQSTCPSPNQPLSTMGPADELLDPRRRDLIARLSRYMENPETDSIGWACLWFADPSTMEDLIKACEQN
PPTVSRHISAALKKNDQRAQAIRALPRASARSSEDSGEPSADEESDTEEPPTKKRRLTSNPCRAKELCEERDDEK
CVLTGCTVPVEVVHIIPRSLGKGEEGLGDFWEALECYWSPENVSAWKEQVLDPDGVDTCSNLMCLVNVARRLWEL
AVFALKPLSLSEDKRQLEVQFYWLPMNRYRQTMPVMAIPSPFPHNLSSTNAGYTTVLCNIVTRSRISSGDIFTFK
TDDPVGHPLPSMQLLNMQWILTRVLALSGAPWVTEEEEDQ*
Coding >Ani_SJS100_1|g6542.t1
ATGTCAACATCCACTCCTACCTCGCAATCTACCTGTCCTTCTCCCAACCAGCCCTTGTCGACCATGGGCCCTGCT
GACGAGCTCCTTGATCCACGGCGACGTGATCTGATCGCACGGCTGTCTCGATATATGGAAAATCCAGAAACTGAT
TCGATCGGATGGGCTTGCTTGTGGTTTGCAGATCCCTCTACAATGGAGGATCTTATCAAAGCCTGTGAACAGAAT
CCGCCAACCGTCTCCCGTCATATATCCGCTGCTCTGAAGAAGAATGACCAGAGAGCACAAGCTATCAGAGCTTTA
CCAAGGGCATCTGCACGGTCCAGTGAAGACTCGGGAGAGCCTTCTGCAGACGAAGAATCAGACACAGAAGAGCCT
CCAACTAAGAAGCGCCGGCTTACTTCGAATCCTTGTCGTGCAAAAGAGCTATGCGAGGAGCGAGATGATGAGAAG
TGTGTTCTCACCGGTTGCACTGTTCCAGTCGAAGTGGTGCACATAATCCCCAGAAGCCTCGGCAAGGGTGAAGAG
GGACTCGGCGACTTTTGGGAAGCTTTAGAATGTTACTGGTCCCCAGAAAATGTCAGCGCCTGGAAGGAACAGGTC
TTAGACCCAGATGGAGTCGACACCTGTTCTAATCTCATGTGTCTGGTGAATGTGGCCCGCAGATTATGGGAACTT
GCGGTGTTTGCCTTGAAACCTCTGTCCCTGAGTGAGGATAAAAGGCAGCTTGAAGTACAATTCTATTGGCTTCCG
ATGAACAGATACCGACAGACAATGCCAGTAATGGCCATCCCCAGTCCTTTCCCTCACAATCTTTCCAGCACAAAT
GCTGGATATACAACCGTGCTATGTAATATTGTCACGCGCTCGAGGATATCCTCTGGGGACATCTTTACCTTTAAG
ACTGATGACCCAGTGGGTCACCCCCTTCCATCCATGCAGCTACTGAACATGCAGTGGATTCTAACTCGGGTCCTT
GCCCTCAGCGGCGCCCCCTGGGTGACCGAGGAAGAGGAAGACCAATAA
Transcript >Ani_SJS100_1|g6542.t1
ATGTCAACATCCACTCCTACCTCGCAATCTACCTGTCCTTCTCCCAACCAGCCCTTGTCGACCATGGGCCCTGCT
GACGAGCTCCTTGATCCACGGCGACGTGATCTGATCGCACGGCTGTCTCGATATATGGAAAATCCAGAAACTGAT
TCGATCGGATGGGCTTGCTTGTGGTTTGCAGATCCCTCTACAATGGAGGATCTTATCAAAGCCTGTGAACAGAAT
CCGCCAACCGTCTCCCGTCATATATCCGCTGCTCTGAAGAAGAATGACCAGAGAGCACAAGCTATCAGAGCTTTA
CCAAGGGCATCTGCACGGTCCAGTGAAGACTCGGGAGAGCCTTCTGCAGACGAAGAATCAGACACAGAAGAGCCT
CCAACTAAGAAGCGCCGGCTTACTTCGAATCCTTGTCGTGCAAAAGAGCTATGCGAGGAGCGAGATGATGAGAAG
TGTGTTCTCACCGGTTGCACTGTTCCAGTCGAAGTGGTGCACATAATCCCCAGAAGCCTCGGCAAGGGTGAAGAG
GGACTCGGCGACTTTTGGGAAGCTTTAGAATGTTACTGGTCCCCAGAAAATGTCAGCGCCTGGAAGGAACAGGTC
TTAGACCCAGATGGAGTCGACACCTGTTCTAATCTCATGTGTCTGGTGAATGTGGCCCGCAGATTATGGGAACTT
GCGGTGTTTGCCTTGAAACCTCTGTCCCTGAGTGAGGATAAAAGGCAGCTTGAAGTACAATTCTATTGGCTTCCG
ATGAACAGATACCGACAGACAATGCCAGTAATGGCCATCCCCAGTCCTTTCCCTCACAATCTTTCCAGCACAAAT
GCTGGATATACAACCGTGCTATGTAATATTGTCACGCGCTCGAGGATATCCTCTGGGGACATCTTTACCTTTAAG
ACTGATGACCCAGTGGGTCACCCCCTTCCATCCATGCAGCTACTGAACATGCAGTGGATTCTAACTCGGGTCCTT
GCCCTCAGCGGCGCCCCCTGGGTGACCGAGGAAGAGGAAGACCAATAA
Gene >Ani_SJS100_1|g6542.t1
ATGTCAACATCCACTCCTACCTCGCAATCTACCTGTCCTTCTCCCAACCAGCCCTTGTCGACCATGGGCCCTGCT
GACGAGCTCCTTGATCCACGGCGACGTGATCTGATCGCACGGCTGTCTCGATATATGGAAAATCCAGAAACTGAT
TCGATCGGATGGGCTTGCTTGTGGTTTGCAGATCCCTCTACAATGGAGGATCTTATCAAAGCCTGTGAACAGAAT
CCGCCAACCGTCTCCCGTCATATATCCGCTGCTCTGAAGAAGAATGACCAGAGAGCACAAGCTATCAGAGCTTGT
AAGTGAATCGACTGACCATGTAATCGATCTTGCGCTGATCCAGTACCAAGGGCATCTGCACGGTCCAGTGAAGAC
TCGGGAGAGCCTTCTGCAGACGAAGAATCAGACACAGAAGAGCCTCCAACTAAGAAGCGCCGGCTTACTTCGAAT
CCTTGTCGTGCAAAAGAGCTAGTAAGTTGAACAGACATAATACCCGATTGAGTCACTGTTTTACTAATACTACCA
AGTGCGAGGAGCGAGATGATGAGAAGTGTGTTCTCACCGGTTGCACTGTTCCAGTCGAAGTGGTGCACATAATCC
CCAGAAGCCTCGGCAAGGGTGAAGAGGGACTCGGCGACTTTTGGGAAGCTTTAGAATGTTACTGGTCCCCAGAAA
ATGTCAGCGCCTGGAAGGAACAGGTCTTAGACCCAGATGGAGTCGACACCTGTTCTAATCTCATGTGTCTGGTGA
ATGTGGCCCGCAGATTATGGGAACTTGCGGTGTTTGCCTTGAAACCTCTGTCCCTGAGTGAGGATAAAAGGCAGC
TTGAAGTACAATTCTATTGGCTTCCGATGAACAGATACCGACAGACAATGCCAGTAATGGCCATCCCCAGTCCTT
TCCCTCACAATCTTTCCAGCACAAATGCTGGATATACAACCGTGCTATGTAATATTGTCACGCGCTCGAGGATAT
CCTCTGGGGACATCTTTACCTTTAAGACTGATGACCCAGTGGGTCACCCCCTTCCATCCATGCAGCTACTGAACA
TGCAGTGGATTCTAACTCGGGTCCTTGCCCTCAGCGGCGCCCCCTGGGTGACCGAGGAAGAGGAAGACCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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