Protein ID | Ani_SJS100_1|g6475.t1 |
Gene name | |
Location | scaffold_040:170696..171260 |
Strand | + |
Gene length (bp) | 564 |
Transcript length (bp) | 564 |
Coding sequence length (bp) | 564 |
Protein length (aa) | 188 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07883 | Cupin_2 | Cupin domain | 1.3E-07 | 86 | 153 |
Orthofinder run ID | 3 |
Orthogroup | 6753 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6475.t1 MAVPSGLPNYTRHITSHNSSGEAIIHSSTAGDWSSIGDDRFGFSVAYTTSSFPPDLNNDADISTHTAKMESKNLG LVSPNGTVCRVVDFAPNTDPFMHRTRSLDYGVVLEGEIIMELDSGEKVTMKKGDIAVQRGTMHGWRNPSKENWTR MLFVLQDCKPITAEGGKQLGEDLGHSSDLPPSDGANQ* |
Coding | >Ani_SJS100_1|g6475.t1 ATGGCTGTCCCCTCCGGCCTCCCCAACTACACTCGCCACATAACCTCCCACAACTCCTCTGGCGAGGCAATAATA CACTCCTCCACAGCAGGCGACTGGTCAAGCATCGGGGACGACAGATTCGGCTTCAGCGTCGCCTACACGACCTCG TCCTTCCCGCCCGACCTCAACAATGACGCCGATATTTCTACCCACACTGCCAAAATGGAATCCAAGAACCTCGGG CTCGTCAGCCCCAACGGCACCGTCTGCCGCGTGGTGGACTTTGCGCCAAACACAGACCCATTCATGCACCGCACG CGGAGTTTAGACTACGGAGTTGTCCTGGAGGGCGAAATCATCATGGAGCTGGACTCGGGGGAGAAAGTGACGATG AAGAAGGGCGACATAGCCGTGCAGCGGGGGACGATGCACGGATGGCGCAACCCAAGCAAGGAGAACTGGACGCGA ATGCTGTTCGTGCTGCAAGACTGCAAACCCATCACTGCAGAGGGAGGCAAGCAGCTGGGTGAAGATCTGGGACAT TCGTCGGATTTGCCTCCCTCCGACGGAGCTAATCAATAG |
Transcript | >Ani_SJS100_1|g6475.t1 ATGGCTGTCCCCTCCGGCCTCCCCAACTACACTCGCCACATAACCTCCCACAACTCCTCTGGCGAGGCAATAATA CACTCCTCCACAGCAGGCGACTGGTCAAGCATCGGGGACGACAGATTCGGCTTCAGCGTCGCCTACACGACCTCG TCCTTCCCGCCCGACCTCAACAATGACGCCGATATTTCTACCCACACTGCCAAAATGGAATCCAAGAACCTCGGG CTCGTCAGCCCCAACGGCACCGTCTGCCGCGTGGTGGACTTTGCGCCAAACACAGACCCATTCATGCACCGCACG CGGAGTTTAGACTACGGAGTTGTCCTGGAGGGCGAAATCATCATGGAGCTGGACTCGGGGGAGAAAGTGACGATG AAGAAGGGCGACATAGCCGTGCAGCGGGGGACGATGCACGGATGGCGCAACCCAAGCAAGGAGAACTGGACGCGA ATGCTGTTCGTGCTGCAAGACTGCAAACCCATCACTGCAGAGGGAGGCAAGCAGCTGGGTGAAGATCTGGGACAT TCGTCGGATTTGCCTCCCTCCGACGGAGCTAATCAATAG |
Gene | >Ani_SJS100_1|g6475.t1 ATGGCTGTCCCCTCCGGCCTCCCCAACTACACTCGCCACATAACCTCCCACAACTCCTCTGGCGAGGCAATAATA CACTCCTCCACAGCAGGCGACTGGTCAAGCATCGGGGACGACAGATTCGGCTTCAGCGTCGCCTACACGACCTCG TCCTTCCCGCCCGACCTCAACAATGACGCCGATATTTCTACCCACACTGCCAAAATGGAATCCAAGAACCTCGGG CTCGTCAGCCCCAACGGCACCGTCTGCCGCGTGGTGGACTTTGCGCCAAACACAGACCCATTCATGCACCGCACG CGGAGTTTAGACTACGGAGTTGTCCTGGAGGGCGAAATCATCATGGAGCTGGACTCGGGGGAGAAAGTGACGATG AAGAAGGGCGACATAGCCGTGCAGCGGGGGACGATGCACGGATGGCGCAACCCAAGCAAGGAGAACTGGACGCGA ATGCTGTTCGTGCTGCAAGACTGCAAACCCATCACTGCAGAGGGAGGCAAGCAGCTGGGTGAAGATCTGGGACAT TCGTCGGATTTGCCTCCCTCCGACGGAGCTAATCAATAG |