Protein ID | Ani_SJS100_1|g6459.t1 |
Gene name | |
Location | scaffold_040:127374..130221 |
Strand | + |
Gene length (bp) | 2847 |
Transcript length (bp) | 1086 |
Coding sequence length (bp) | 1086 |
Protein length (aa) | 362 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04666 | Glyco_transf_54 | N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region | 1.8E-08 | 2 | 151 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 31 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 169 | 191 | 22 |
2 | 198 | 220 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6459.t1 MCVGIASVARKGVNYLQGAVGSVLEGLTAAEREDLYLIVFIAHSDPAEHPAYMEPWLHNLADKVLVYDPDLVDIE HIRSLETPEAKKFAREKGLFDHTYLLKACEALNTSYTVILEDDVVALDGWYHRTKQALDVAERKAEEEGVDQWLY LRLFYTEIFLGWNSEEWPTYLFFSLLTAAVVVITTTAIRYCCPATDRYLSNEIITVLSLVITPLLIVLFFAAGRN TMLPIPEGVHAMPKFGCCSQGHLPETASTRETSHEVNLSDNASHKLIFDLLFPGIITNAKMWNIFEDELQENLNA AKTDQNTTSQEVQRSFIMQLSSAESRLRSKCEIQVWSHTLDERHGTSTGRGGSGVTQIAED* |
Coding | >Ani_SJS100_1|g6459.t1 ATGTGCGTCGGGATTGCCTCAGTAGCACGAAAGGGCGTGAACTACCTCCAAGGCGCGGTAGGCTCCGTCTTAGAA GGCCTTACCGCGGCAGAGAGGGAAGACTTATACCTTATCGTCTTCATCGCACATTCAGATCCAGCGGAGCATCCA GCGTACATGGAGCCGTGGCTTCATAATCTCGCTGACAAAGTGCTCGTCTATGATCCGGATTTGGTGGATATAGAA CATATTCGGAGCTTAGAGACACCGGAAGCGAAGAAGTTTGCTCGAGAGAAGGGCCTCTTTGATCATACGTATCTC CTTAAAGCGTGTGAGGCGCTTAATACGTCATATACGGTTATTCTTGAGGACGATGTTGTTGCTCTGGACGGCTGG TATCATCGGACTAAGCAGGCTTTAGATGTTGCTGAGCGGAAGGCGGAGGAGGAGGGGGTGGATCAGTGGCTGTAT CTACGACTATTCTACACTGAGATATTTCTAGGATGGAACTCGGAAGAGTGGCCCACCTACCTCTTCTTTTCTCTC CTTACTGCAGCTGTGGTCGTGATCACTACAACCGCTATCCGATATTGTTGTCCTGCTACGGATAGATACCTTTCC AACGAGATAATCACAGTCTTATCTCTTGTGATTACTCCCCTCCTGATTGTCCTCTTCTTCGCTGCCGGAAGGAAC ACAATGCTCCCAATACCAGAGGGAGTGCACGCGATGCCCAAGTTTGGATGTTGTTCTCAGGGTCACCTTCCTGAG ACTGCCAGCACACGAGAGACATCGCATGAGGTTAATCTCTCCGATAACGCATCTCACAAGCTGATATTCGATCTT CTGTTTCCCGGTATTATCACCAATGCGAAAATGTGGAACATCTTTGAAGACGAGCTTCAGGAGAATCTAAACGCA GCAAAAACAGACCAGAATACTACTTCACAAGAAGTCCAGCGGAGTTTCATCATGCAACTAAGCTCTGCTGAGAGC AGGTTGCGATCCAAATGTGAGATACAGGTATGGTCGCACACCTTGGATGAGCGCCACGGTACGTCGACAGGCCGG GGTGGTAGCGGCGTTACTCAAATCGCCGAAGACTGA |
Transcript | >Ani_SJS100_1|g6459.t1 ATGTGCGTCGGGATTGCCTCAGTAGCACGAAAGGGCGTGAACTACCTCCAAGGCGCGGTAGGCTCCGTCTTAGAA GGCCTTACCGCGGCAGAGAGGGAAGACTTATACCTTATCGTCTTCATCGCACATTCAGATCCAGCGGAGCATCCA GCGTACATGGAGCCGTGGCTTCATAATCTCGCTGACAAAGTGCTCGTCTATGATCCGGATTTGGTGGATATAGAA CATATTCGGAGCTTAGAGACACCGGAAGCGAAGAAGTTTGCTCGAGAGAAGGGCCTCTTTGATCATACGTATCTC CTTAAAGCGTGTGAGGCGCTTAATACGTCATATACGGTTATTCTTGAGGACGATGTTGTTGCTCTGGACGGCTGG TATCATCGGACTAAGCAGGCTTTAGATGTTGCTGAGCGGAAGGCGGAGGAGGAGGGGGTGGATCAGTGGCTGTAT CTACGACTATTCTACACTGAGATATTTCTAGGATGGAACTCGGAAGAGTGGCCCACCTACCTCTTCTTTTCTCTC CTTACTGCAGCTGTGGTCGTGATCACTACAACCGCTATCCGATATTGTTGTCCTGCTACGGATAGATACCTTTCC AACGAGATAATCACAGTCTTATCTCTTGTGATTACTCCCCTCCTGATTGTCCTCTTCTTCGCTGCCGGAAGGAAC ACAATGCTCCCAATACCAGAGGGAGTGCACGCGATGCCCAAGTTTGGATGTTGTTCTCAGGGTCACCTTCCTGAG ACTGCCAGCACACGAGAGACATCGCATGAGGTTAATCTCTCCGATAACGCATCTCACAAGCTGATATTCGATCTT CTGTTTCCCGGTATTATCACCAATGCGAAAATGTGGAACATCTTTGAAGACGAGCTTCAGGAGAATCTAAACGCA GCAAAAACAGACCAGAATACTACTTCACAAGAAGTCCAGCGGAGTTTCATCATGCAACTAAGCTCTGCTGAGAGC AGGTTGCGATCCAAATGTGAGATACAGGTATGGTCGCACACCTTGGATGAGCGCCACGGTACGTCGACAGGCCGG GGTGGTAGCGGCGTTACTCAAATCGCCGAAGACTGA |
Gene | >Ani_SJS100_1|g6459.t1 ATGTGCGTCGGGATTGCCTCAGTAGCACGAAAGGGCGTGAACTACCTCCAAGGCGCGGTAGGCTCCGTCTTAGAA GGCCTTACCGCGGCAGAGAGGGAAGACTTATACCTTATCGTCTTCATCGCACATTCAGATCCAGCGGAGCATCCA GCGTACATGGAGCCGTGGCTTCATAATCTCGCTGACAAAGTGCTCGTCTATGATCCGGATTTGGTGGATATAGAA CATATTCGGAGCTTAGAGACACCGGAAGCGAAGAAGTTTGCTCGAGAGAAGGGCCTCTTTGATCATACGTATCTC CTTAAAGCGTGTGAGGCGCTTAATACGTCATATACGGTTATTCTTGAGGACGATGTTGTTGCTCTGGACGGCTGG TATCATCGGACTAAGCAGGCTTTAGATGTTGCTGAGCGGAAGGCGGAGGAGGAGGGGGTGGATCAGTGTAAGGAC GTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTTTTGGGGTGGGGTGTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATGACAGATATACGATGGAAGATAAGCTAACAGAGAAGT TGTAAAAGGGCTGTATCTACGACTATTCTACACTGAGATATTTCTAGGATGGAACTCGGAAGAGTGGCCCACCTA CCTCTTCTTTTCTCTCCTTACTGCAGCTGTGGTCGTGATCACTACAACCGCTATCCGATATTGTTGTCCTGCTAC GGATAGATACCTTTCCAACGAGATAATCACAGTCTTATCTCTTGTGATTACTCCCCTCCTGATTGTCCTCTTCTT CGCTGCCGGAAGGAACACAATGCTCCCAATACCAGAGGGAGTGCACGCGATGCCCAAGTTTGGATGTTGTTCTCA GGGGTTCGTGTTTCCACAAACACGTATCGGAGACCTGGTGTCATGGTACGAGAGGAATAAAGTTGGGTATGTTGA TATGCTGACGGAGAGATATGCCGATCAGAACGGGGAGGTTCGTTGGGCGTTGACCCCCAGTGTGTTGCAGCATGT TGGGAGCCGGAGCTCGAAGACGAATTCTTTGGGGAAACACAGAGAACGGCTGACGATGTCTGAAAGGATTTGGAA TTTCAGGTTTGAGGAGAATGATCCGGGAGAGCTGCGTTTGGAGCATCGGCTGCAAGATGAGGAAGTGCGATAGAC CAGTAATAGTGTGGCATATATTTACTCGTCGATTGGCAACCTAGACGCGATATATCGTTCTTGGTCTAGCGGTTA GCGCGTCGGCTTCATATATGGGAGGACGCACTTCCATGCTAAGATATGTAAAGATAAATGCATGCATCGGAATTC ACATGCGTTCTACTAGGTGATCCTCGACGTGCCCAGATCAACCATCACGTAGAAAGCGAGTCCGCACTCCGTACT TTGCTTATTCTGTATTTACATAATAGGCAGTTATAGGCCACATTGGAAGGAACCGTATTTAAATCAAGACATTCC GAGTTCATAATTCACCATATAACAATCACAGGCAAGGAGACAGTGTAATAGACTATGAAGGTAGTGTACAATGAA AAGAAACTTCCAGGGTGAAAGCACAAGACGCATACCCAGACTACGAAAGGGATGAAGACGAGAAGGAAATCGCCG AAAACGATGTCAAAATAGCCGATTACATACACAATTCTCTTGCCAGTCACCTTCCTGAGACTGCCAGCACACGAG AGACATCGCATGAGGTTAATCTCTCCGATAACGCATCTCACAAGCTGATATTCGATCTTCTGTTTCCCGGTATTA TCACCAATGCGAAAATGTGGAACATCTTTGAAGACGAGCTTCAGGAGAATCTAAACGCAGCAAAAACAGACCAGA ATACTACTTCACAAGAAGTCCAGCGGAGTTTCATCATGCAACTGTATGTGTATGATGAATATATCGATGATCTCA AAGTAAAATTATGGGTAAATACCTGGAAGATCGCGGAAGATATACAAACAATACAAAGTGGGAAAGGCTCAACCA TTCAGCAGAATGTCTCATTTTCCCTGAGAAATGATGTTCTCACGCTTTCCGAGGAAGAATATCCCAACAAACCCG CTAATACTGATACGGGAGGAAAATGAAAGGAAGGCGTGCAATGGGTAGAGATGTTGATCTTTAAACAGTTATACT ATGTCGCAAAAGGCACAAATGGTCCTCATGTTGTTGAATAACAATCCTAGAGTTGGTGTGCACGGATGTGACTGC AATTAGATACGAGACTGTGAAGCGGACCTCGCGCTCATCAAGGTCTTGAAAGTACAAAGGATGAATGAGTCTTTC TCACTATAGTGCCATATTATATTCATATTTCAATGATATTGGCAGTATTTTATGCCATCTAAAGTTTGTTGATGG GGCTATAAAAGAGAGGCCTATAATGTGGGCCGGTGCTGGAGGGTTTGAACTTATTGTGAAGATGCTTCTCATAAG AGGCGCGGTAGATTGTATTTATCAGTCTGGTGAATCTCCACTGTTTGGGGCGTTGAAAGCTTGCCCCTCCGGACT CGGTGAAAGAATAACACGAGGCTACCGCTCAATGACTAGGAATGAGACTGGAGATACGAACGCAGTGGTAAAGTT GTTATTACGGTATGGTGCAGACCCAAACATCAGGAATCGGCATGGCCGAGTGTCGTTGTTCTGGGTTCTGAATTA CGGCTCGGGGGCATCGGTAGAAGCTCTGCTGAGAGCAGGTTGCGATCCAAATGTGAGATACAGGTATGGTCGCAC ACCTTGGATGAGCGCCACGGTACGTCGACAGGCCGGGGTGGTAGCGGCGTTACTCAAATCGCCGAAGACTGA |