© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g645.t1 |
| Gene name | |
| Location | scaffold_002:629537..631541 |
| Strand | - |
| Gene length (bp) | 2004 |
| Transcript length (bp) | 1833 |
| Coding sequence length (bp) | 1833 |
| Protein length (aa) | 611 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05743 | UEV | UEV domain | 7.3E-38 | 60 | 182 |
| PF09454 | Vps23_core | Vps23 core domain | 5.0E-22 | 537 | 600 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015031 | protein transport | Yes |
| GO:0036211 | protein modification process | Yes |
| GO:0008152 | metabolic process | No |
| GO:0008104 | protein localization | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0006810 | transport | No |
| GO:0043412 | macromolecule modification | No |
| GO:0009987 | cellular process | No |
| GO:0033036 | macromolecule localization | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0071702 | organic substance transport | No |
| GO:0051641 | cellular localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g645.t1 MPRESSSNSNSNSAIPLLPPCAFASSAMAAVPQRTLNWLYSVLIRDHYDPRQTYQDPNRTYYDVANVLGQYPSLG PRTEVYTYENGFSALLLQLTGTLPVTFRGTVYKFPITLWIPNTYPREPPLVYVTPTQDMAVRVGQHVTLEGRVYH HYLAHWAEAWERSSLIDFLMILREVFAKEPPVRYKQQQPVQPRPPPPAQVQAQAPPLPPLPPELDTSINRPSSTH SAPNASPQVPAQVPPPPPPKPGQTPEPQSQGTPSSGRYSSPPPLPPLPPKEHDSRRIPMQPQTGIGNPMNRPQYL PDRSQVPVVASGQYQLPQQPQHVSQSTPAYQTGPAQFQSPNGVPVTRPDDPSRGLPQRNSYHPVQQAPPAAYQRP PPQQVPPQGSPHVGLQQAQQPAPRPKSETQDLLTSPFELELPSFAPTGPAPPIPPNPEKDALLRAVSKTLAETLQ ANVAQSETAAQSLISQSHSLHAAIATLQGEVSSLNTLNATLQSNTTTLQQSLMRADGVIADAQSRISSSAPSSST DPVTSGLPPIDEVLVAPTVVGKQLYDLVAEERGIQQAIYALQAALVKGVIGVETWSRHTRGLAREAFLKRALIRK IGKGMGLEVH* |
| Coding | >Ani_SJS100_1|g645.t1 ATGCCCAGGGAGTCTAGCTCCAACTCCAACTCCAACTCCGCCATCCCACTTCTCCCACCATGCGCCTTCGCCTCC TCCGCCATGGCTGCTGTGCCGCAAAGGACGCTTAACTGGCTGTACAGTGTCCTTATCAGGGACCACTACGATCCC CGACAAACCTACCAGGACCCCAACCGCACCTACTATGATGTAGCTAATGTGCTCGGTCAATACCCTTCGCTGGGC CCCAGGACTGAAGTCTACACATACGAGAACGGTTTCTCCGCCCTCCTCCTCCAACTGACCGGCACGTTGCCCGTG ACGTTTCGCGGCACTGTTTACAAGTTTCCCATCACACTATGGATCCCAAATACATACCCCAGAGAACCGCCATTG GTTTATGTAACACCGACGCAAGACATGGCCGTTCGTGTGGGCCAGCATGTCACTTTGGAAGGGAGGGTGTACCAT CACTACCTGGCACACTGGGCTGAAGCGTGGGAGCGATCATCTCTTATTGATTTCCTGATGATACTTCGTGAGGTT TTCGCCAAGGAGCCGCCGGTGAGATATAAACAGCAACAGCCTGTACAGCCGCGACCGCCTCCGCCAGCGCAGGTA CAGGCGCAAGCACCTCCTCTACCTCCTCTGCCTCCGGAGCTTGATACCTCAATTAATCGGCCCTCTTCTACCCAT AGCGCTCCGAATGCTTCTCCGCAAGTACCTGCTCAGGTGCCACCACCGCCGCCTCCAAAACCCGGGCAGACACCT GAGCCACAATCACAGGGCACTCCGTCATCAGGGAGATACTCGTCTCCCCCTCCGCTGCCTCCACTGCCACCAAAG GAGCATGATTCCAGGAGAATACCGATGCAACCACAGACAGGCATTGGCAACCCTATGAACAGGCCCCAGTACCTA CCGGATCGCAGTCAAGTTCCTGTAGTAGCATCAGGACAGTATCAGTTGCCCCAACAACCGCAGCACGTCTCTCAG TCGACACCGGCATACCAGACTGGCCCAGCGCAGTTTCAATCACCGAACGGTGTCCCTGTTACTCGCCCAGATGAC CCCAGTCGTGGGCTTCCGCAACGGAACTCTTACCACCCCGTACAACAAGCCCCTCCTGCAGCCTACCAGAGACCT CCGCCACAGCAGGTCCCACCGCAAGGTTCACCCCATGTTGGACTTCAGCAAGCACAGCAACCAGCTCCACGTCCC AAGTCAGAGACGCAAGATCTTCTTACCTCTCCGTTTGAGCTCGAGCTCCCCTCGTTCGCACCCACCGGCCCGGCG CCCCCAATTCCACCCAACCCCGAGAAGGACGCCCTACTGCGGGCCGTCTCTAAGACTCTAGCTGAAACACTGCAA GCAAACGTCGCACAGTCCGAGACTGCTGCTCAATCTTTGATTTCTCAATCCCACTCGCTGCATGCGGCAATTGCG ACGCTTCAAGGCGAAGTATCGTCGCTCAACACGCTCAACGCGACTCTTCAATCGAACACCACGACTCTGCAGCAA TCTCTCATGCGCGCCGACGGCGTCATCGCCGATGCGCAAAGCCGTATATCATCCTCGGCCCCGTCATCCAGCACT GATCCCGTTACTTCGGGTCTCCCACCAATCGACGAAGTTCTCGTTGCCCCAACCGTGGTCGGTAAACAATTGTAC GACTTGGTTGCTGAGGAACGCGGTATTCAGCAGGCAATCTATGCCCTCCAAGCTGCGCTGGTTAAGGGTGTCATT GGGGTTGAGACCTGGTCGCGTCACACGCGTGGACTTGCGCGAGAAGCGTTCTTGAAACGTGCATTGATACGGAAG ATCGGGAAAGGCATGGGATTGGAAGTGCATTGA |
| Transcript | >Ani_SJS100_1|g645.t1 ATGCCCAGGGAGTCTAGCTCCAACTCCAACTCCAACTCCGCCATCCCACTTCTCCCACCATGCGCCTTCGCCTCC TCCGCCATGGCTGCTGTGCCGCAAAGGACGCTTAACTGGCTGTACAGTGTCCTTATCAGGGACCACTACGATCCC CGACAAACCTACCAGGACCCCAACCGCACCTACTATGATGTAGCTAATGTGCTCGGTCAATACCCTTCGCTGGGC CCCAGGACTGAAGTCTACACATACGAGAACGGTTTCTCCGCCCTCCTCCTCCAACTGACCGGCACGTTGCCCGTG ACGTTTCGCGGCACTGTTTACAAGTTTCCCATCACACTATGGATCCCAAATACATACCCCAGAGAACCGCCATTG GTTTATGTAACACCGACGCAAGACATGGCCGTTCGTGTGGGCCAGCATGTCACTTTGGAAGGGAGGGTGTACCAT CACTACCTGGCACACTGGGCTGAAGCGTGGGAGCGATCATCTCTTATTGATTTCCTGATGATACTTCGTGAGGTT TTCGCCAAGGAGCCGCCGGTGAGATATAAACAGCAACAGCCTGTACAGCCGCGACCGCCTCCGCCAGCGCAGGTA CAGGCGCAAGCACCTCCTCTACCTCCTCTGCCTCCGGAGCTTGATACCTCAATTAATCGGCCCTCTTCTACCCAT AGCGCTCCGAATGCTTCTCCGCAAGTACCTGCTCAGGTGCCACCACCGCCGCCTCCAAAACCCGGGCAGACACCT GAGCCACAATCACAGGGCACTCCGTCATCAGGGAGATACTCGTCTCCCCCTCCGCTGCCTCCACTGCCACCAAAG GAGCATGATTCCAGGAGAATACCGATGCAACCACAGACAGGCATTGGCAACCCTATGAACAGGCCCCAGTACCTA CCGGATCGCAGTCAAGTTCCTGTAGTAGCATCAGGACAGTATCAGTTGCCCCAACAACCGCAGCACGTCTCTCAG TCGACACCGGCATACCAGACTGGCCCAGCGCAGTTTCAATCACCGAACGGTGTCCCTGTTACTCGCCCAGATGAC CCCAGTCGTGGGCTTCCGCAACGGAACTCTTACCACCCCGTACAACAAGCCCCTCCTGCAGCCTACCAGAGACCT CCGCCACAGCAGGTCCCACCGCAAGGTTCACCCCATGTTGGACTTCAGCAAGCACAGCAACCAGCTCCACGTCCC AAGTCAGAGACGCAAGATCTTCTTACCTCTCCGTTTGAGCTCGAGCTCCCCTCGTTCGCACCCACCGGCCCGGCG CCCCCAATTCCACCCAACCCCGAGAAGGACGCCCTACTGCGGGCCGTCTCTAAGACTCTAGCTGAAACACTGCAA GCAAACGTCGCACAGTCCGAGACTGCTGCTCAATCTTTGATTTCTCAATCCCACTCGCTGCATGCGGCAATTGCG ACGCTTCAAGGCGAAGTATCGTCGCTCAACACGCTCAACGCGACTCTTCAATCGAACACCACGACTCTGCAGCAA TCTCTCATGCGCGCCGACGGCGTCATCGCCGATGCGCAAAGCCGTATATCATCCTCGGCCCCGTCATCCAGCACT GATCCCGTTACTTCGGGTCTCCCACCAATCGACGAAGTTCTCGTTGCCCCAACCGTGGTCGGTAAACAATTGTAC GACTTGGTTGCTGAGGAACGCGGTATTCAGCAGGCAATCTATGCCCTCCAAGCTGCGCTGGTTAAGGGTGTCATT GGGGTTGAGACCTGGTCGCGTCACACGCGTGGACTTGCGCGAGAAGCGTTCTTGAAACGTGCATTGATACGGAAG ATCGGGAAAGGCATGGGATTGGAAGTGCATTGA |
| Gene | >Ani_SJS100_1|g645.t1 ATGCCCAGGGAGTCTAGCTCCAACTCCAACTCCAACTCCGCCATCCCACTTCTCCCACCATGCGCCTTCGCCTCC TCCGCCATGGCTGCTGTGCCGCAAAGGACGCTTAACTGGCTGTACAGTGTCCTTATCAGGGTAGCTAAAAACCAA ACACGGACTCCTAGAATAGGACCACTGACAGAAATAGGACCACTACGATCCCCGACAAACCTACCAGGACCCCAA CCGCACCTACTATGATGTAGCTAATGTGCTCGGTCAATACCCTTCGCTGGGCCCCAGGACTGAAGTCTACAGTAT GCCATCTTGCTGCGACCTTACTGCGATCTTACTGACCGATTCTTTTCTTCAAACTTCTAGCATACGAGAACGGTT TCTCCGCCCTCCTCCTCCAACTGACCGGCACGTTGCCCGTGACGTTTCGCGGCACTGTTTACAAGTTTCCCATCA CACTATGGATCCCAAATACATACCCCAGAGAACCGCCATTGGTTTATGTAACACCGACGCAAGACATGGCCGTTC GTGTGGGCCAGCATGTCACTTTGGAAGGGAGGGTGTACCATCACTACCTGGCACACTGGGCTGAAGCGTGGGAGG TTAGTCAATGTGACTCGCAATGCGCATCTCGTTATCGCTGACACCTAAGCTTAGCGATCATCTCTTATTGATTTC CTGATGATACTTCGTGAGGTTTTCGCCAAGGAGCCGCCGGTGAGATATAAACAGCAACAGCCTGTACAGCCGCGA CCGCCTCCGCCAGCGCAGGTACAGGCGCAAGCACCTCCTCTACCTCCTCTGCCTCCGGAGCTTGATACCTCAATT AATCGGCCCTCTTCTACCCATAGCGCTCCGAATGCTTCTCCGCAAGTACCTGCTCAGGTGCCACCACCGCCGCCT CCAAAACCCGGGCAGACACCTGAGCCACAATCACAGGGCACTCCGTCATCAGGGAGATACTCGTCTCCCCCTCCG CTGCCTCCACTGCCACCAAAGGAGCATGATTCCAGGAGAATACCGATGCAACCACAGACAGGCATTGGCAACCCT ATGAACAGGCCCCAGTACCTACCGGATCGCAGTCAAGTTCCTGTAGTAGCATCAGGACAGTATCAGTTGCCCCAA CAACCGCAGCACGTCTCTCAGTCGACACCGGCATACCAGACTGGCCCAGCGCAGTTTCAATCACCGAACGGTGTC CCTGTTACTCGCCCAGATGACCCCAGTCGTGGGCTTCCGCAACGGAACTCTTACCACCCCGTACAACAAGCCCCT CCTGCAGCCTACCAGAGACCTCCGCCACAGCAGGTCCCACCGCAAGGTTCACCCCATGTTGGACTTCAGCAAGCA CAGCAACCAGCTCCACGTCCCAAGTCAGAGACGCAAGATCTTCTTACCTCTCCGTTTGAGCTCGAGCTCCCCTCG TTCGCACCCACCGGCCCGGCGCCCCCAATTCCACCCAACCCCGAGAAGGACGCCCTACTGCGGGCCGTCTCTAAG ACTCTAGCTGAAACACTGCAAGCAAACGTCGCACAGTCCGAGACTGCTGCTCAATCTTTGATTTCTCAATCCCAC TCGCTGCATGCGGCAATTGCGACGCTTCAAGGCGAAGTATCGTCGCTCAACACGCTCAACGCGACTCTTCAATCG AACACCACGACTCTGCAGCAATCTCTCATGCGCGCCGACGGCGTCATCGCCGATGCGCAAAGCCGTATATCATCC TCGGCCCCGTCATCCAGCACTGATCCCGTTACTTCGGGTCTCCCACCAATCGACGAAGTTCTCGTTGCCCCAACC GTGGTCGGTAAACAATTGTACGACTTGGTTGCTGAGGAACGCGGTATTCAGCAGGCAATCTATGCCCTCCAAGCT GCGCTGGTTAAGGGTGTCATTGGGGTTGAGACCTGGTCGCGTCACACGCGTGGACTTGCGCGAGAAGCGTTCTTG AAACGTGCATTGATACGGAAGATCGGGAAAGGCATGGGATTGGAAGTGCATTGA |