Protein ID | Ani_SJS100_1|g6446.t1 |
Gene name | |
Location | scaffold_040:87721..90094 |
Strand | + |
Gene length (bp) | 2373 |
Transcript length (bp) | 2373 |
Coding sequence length (bp) | 2373 |
Protein length (aa) | 791 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17389 | Bac_rhamnosid6H | Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain | 1.1E-18 | 382 | 685 |
PF08531 | Bac_rhamnosid_N | Alpha-L-rhamnosidase N-terminal domain | 1.1E-05 | 47 | 195 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6446.t1 MASTDWTRAAPWIWLPKYLEEDNCPGRYFLFRKAFQWHHSDDLPNLFVHVSADSRYRLFVNGHRASWGPCKSYPG KWYYETVDIRPYLRDGDNVISARVLRYSTLVPGSSSIVSMPLPGFMLYSPHPELAISTDSSWTCIEQRSVKIIPQ TEWNYLLGPPFLSNNERVEEDQTITGWQMPGYDDAEWDKAVFQSNAVKMLPMVSPWKLTPRPIPDLPENPGKFHG VVKATGSVSEDEWNALIREDQHVVIPADARVTVDLSVDTLMTAFVNFVFRGGADTQISVLYSECYEKDLGVETAP FPMPRTKGNRSDASGRLYGVKDFYNVTSGQESHSFEPFWFRCFRYVQLEITTASKPITLTSISLRETSYPLEITT KVDAGAELNNIWEISLRTLQNCRHETYEDCPFYEQNQFASDSRLQLLFSYQLSPDDRLARKTLEEFHASRTPDGP IVAQYPAGFASKQIPQFSLFWILMVHDHMMYFADRALVRRYLSTVDSIIQHFEDRLDERGLVGQFDPDTWPFVDW VQNWFVPGQIFKSCMPPAYHTAGAATVNSLMYAYALLHAAELCEFVGRISTAEEYRARVRSIQKAVKELCKSNSQ LYLDGPGVEQYSQHTQVFAILSETVTGDAAKQLLRQTVTDSSLAQCSYAMKFYVFRAAEKAGIYSELFPSMLDPW RAMMANNLTTWAEDEVNARSDCHGWSASPVNEIVTQLFGVKPAEPGFGRVRIEPRRELVAQAEGLLYTTRGNIKV QWGPGKPLTVEATSKIQVEIVVDSQVVKKVLGPGEPVIFS* |
Coding | >Ani_SJS100_1|g6446.t1 ATGGCTTCGACCGACTGGACTCGCGCTGCCCCTTGGATCTGGCTGCCTAAATATCTCGAGGAAGATAATTGCCCT GGCCGATACTTCCTCTTCAGAAAGGCCTTTCAATGGCACCATTCAGATGACCTACCAAATCTCTTTGTGCACGTC TCCGCCGACAGTCGCTATCGCCTCTTCGTCAACGGTCATCGCGCGAGCTGGGGTCCCTGCAAGTCCTATCCGGGA AAATGGTACTACGAGACAGTGGATATCCGTCCATATCTCCGCGACGGTGACAATGTAATCAGTGCTCGAGTCCTG CGATATTCCACCCTCGTGCCGGGCTCCTCATCTATCGTGAGCATGCCGCTGCCCGGGTTCATGCTGTACTCCCCG CATCCCGAGCTCGCTATTTCCACAGATTCCTCGTGGACGTGCATCGAGCAGCGCTCCGTCAAGATTATCCCGCAG ACCGAGTGGAACTACCTCCTAGGACCGCCCTTCCTATCCAACAACGAACGCGTCGAGGAGGACCAAACCATAACC GGCTGGCAAATGCCTGGATATGATGACGCGGAGTGGGACAAGGCCGTATTCCAGTCCAATGCAGTGAAAATGCTT CCTATGGTGAGCCCGTGGAAGCTGACTCCGCGTCCAATACCAGATCTTCCCGAAAATCCAGGGAAGTTCCACGGT GTGGTCAAAGCCACTGGTTCCGTCAGCGAGGACGAGTGGAATGCACTGATTCGGGAGGACCAGCACGTGGTAATT CCAGCGGATGCGCGGGTGACAGTGGACCTCAGCGTAGACACGCTGATGACGGCGTTTGTCAACTTCGTTTTCAGA GGTGGAGCAGACACACAAATCAGCGTGTTGTACTCAGAGTGTTACGAGAAGGATCTGGGAGTGGAAACGGCGCCA TTCCCCATGCCTAGAACCAAGGGCAATCGCTCTGATGCGAGCGGTCGCTTGTACGGGGTGAAAGATTTCTACAAT GTCACCTCCGGACAGGAGTCCCACTCGTTCGAGCCATTCTGGTTCCGGTGTTTCCGCTACGTGCAACTCGAAATA ACCACCGCTTCCAAACCAATCACATTGACGAGCATATCCCTGCGAGAGACGTCATACCCACTAGAGATTACCACC AAGGTGGACGCAGGTGCCGAGCTCAACAACATTTGGGAGATCAGTCTGCGAACACTCCAGAATTGCCGCCACGAG ACGTACGAAGATTGCCCGTTCTACGAACAGAATCAATTCGCATCAGATTCTCGATTGCAGCTGCTTTTCAGCTAC CAATTATCCCCTGATGACCGTCTCGCCCGCAAGACACTCGAGGAATTCCACGCCAGCCGGACCCCAGACGGGCCC ATAGTGGCACAGTATCCGGCGGGATTCGCTTCTAAGCAGATCCCGCAGTTCTCGCTATTCTGGATCCTGATGGTA CACGATCACATGATGTACTTTGCGGATCGAGCACTAGTGCGCAGATACTTGAGCACAGTCGATAGCATCATTCAG CATTTCGAGGATCGCCTCGATGAGCGTGGTCTAGTGGGACAGTTCGACCCGGATACGTGGCCGTTCGTGGACTGG GTCCAGAATTGGTTCGTTCCGGGCCAGATCTTCAAGTCATGTATGCCTCCAGCGTATCATACTGCGGGCGCGGCC ACTGTCAACAGTTTGATGTATGCTTATGCCCTGCTACATGCGGCAGAGCTGTGCGAGTTTGTGGGGAGGATAAGC ACGGCGGAAGAATACCGGGCGCGGGTGCGCAGTATCCAGAAAGCCGTAAAGGAACTCTGCAAGTCTAACTCCCAG CTGTATCTGGATGGCCCCGGAGTGGAACAGTACAGCCAACACACACAAGTATTCGCCATCCTCAGCGAGACGGTA ACAGGAGACGCGGCAAAGCAGCTCCTCAGACAGACCGTGACCGACTCTTCACTCGCGCAATGCTCTTATGCAATG AAGTTTTACGTCTTCCGAGCAGCAGAAAAGGCGGGTATATACAGCGAGCTATTTCCCAGCATGCTGGATCCATGG CGGGCCATGATGGCCAATAACCTGACAACATGGGCAGAGGATGAGGTGAACGCCCGCAGCGACTGCCATGGGTGG AGCGCCAGTCCGGTGAACGAGATCGTCACGCAGCTGTTCGGGGTGAAACCCGCCGAGCCAGGCTTTGGGCGGGTC CGCATCGAGCCTCGGAGGGAATTAGTGGCTCAGGCTGAGGGCTTGTTGTATACCACTCGGGGGAATATCAAGGTG CAGTGGGGCCCGGGGAAGCCGCTAACTGTCGAGGCGACGAGTAAGATTCAGGTGGAGATTGTGGTTGATAGTCAG GTGGTTAAGAAGGTGCTGGGTCCTGGGGAACCAGTAATATTTTCTTGA |
Transcript | >Ani_SJS100_1|g6446.t1 ATGGCTTCGACCGACTGGACTCGCGCTGCCCCTTGGATCTGGCTGCCTAAATATCTCGAGGAAGATAATTGCCCT GGCCGATACTTCCTCTTCAGAAAGGCCTTTCAATGGCACCATTCAGATGACCTACCAAATCTCTTTGTGCACGTC TCCGCCGACAGTCGCTATCGCCTCTTCGTCAACGGTCATCGCGCGAGCTGGGGTCCCTGCAAGTCCTATCCGGGA AAATGGTACTACGAGACAGTGGATATCCGTCCATATCTCCGCGACGGTGACAATGTAATCAGTGCTCGAGTCCTG CGATATTCCACCCTCGTGCCGGGCTCCTCATCTATCGTGAGCATGCCGCTGCCCGGGTTCATGCTGTACTCCCCG CATCCCGAGCTCGCTATTTCCACAGATTCCTCGTGGACGTGCATCGAGCAGCGCTCCGTCAAGATTATCCCGCAG ACCGAGTGGAACTACCTCCTAGGACCGCCCTTCCTATCCAACAACGAACGCGTCGAGGAGGACCAAACCATAACC GGCTGGCAAATGCCTGGATATGATGACGCGGAGTGGGACAAGGCCGTATTCCAGTCCAATGCAGTGAAAATGCTT CCTATGGTGAGCCCGTGGAAGCTGACTCCGCGTCCAATACCAGATCTTCCCGAAAATCCAGGGAAGTTCCACGGT GTGGTCAAAGCCACTGGTTCCGTCAGCGAGGACGAGTGGAATGCACTGATTCGGGAGGACCAGCACGTGGTAATT CCAGCGGATGCGCGGGTGACAGTGGACCTCAGCGTAGACACGCTGATGACGGCGTTTGTCAACTTCGTTTTCAGA GGTGGAGCAGACACACAAATCAGCGTGTTGTACTCAGAGTGTTACGAGAAGGATCTGGGAGTGGAAACGGCGCCA TTCCCCATGCCTAGAACCAAGGGCAATCGCTCTGATGCGAGCGGTCGCTTGTACGGGGTGAAAGATTTCTACAAT GTCACCTCCGGACAGGAGTCCCACTCGTTCGAGCCATTCTGGTTCCGGTGTTTCCGCTACGTGCAACTCGAAATA ACCACCGCTTCCAAACCAATCACATTGACGAGCATATCCCTGCGAGAGACGTCATACCCACTAGAGATTACCACC AAGGTGGACGCAGGTGCCGAGCTCAACAACATTTGGGAGATCAGTCTGCGAACACTCCAGAATTGCCGCCACGAG ACGTACGAAGATTGCCCGTTCTACGAACAGAATCAATTCGCATCAGATTCTCGATTGCAGCTGCTTTTCAGCTAC CAATTATCCCCTGATGACCGTCTCGCCCGCAAGACACTCGAGGAATTCCACGCCAGCCGGACCCCAGACGGGCCC ATAGTGGCACAGTATCCGGCGGGATTCGCTTCTAAGCAGATCCCGCAGTTCTCGCTATTCTGGATCCTGATGGTA CACGATCACATGATGTACTTTGCGGATCGAGCACTAGTGCGCAGATACTTGAGCACAGTCGATAGCATCATTCAG CATTTCGAGGATCGCCTCGATGAGCGTGGTCTAGTGGGACAGTTCGACCCGGATACGTGGCCGTTCGTGGACTGG GTCCAGAATTGGTTCGTTCCGGGCCAGATCTTCAAGTCATGTATGCCTCCAGCGTATCATACTGCGGGCGCGGCC ACTGTCAACAGTTTGATGTATGCTTATGCCCTGCTACATGCGGCAGAGCTGTGCGAGTTTGTGGGGAGGATAAGC ACGGCGGAAGAATACCGGGCGCGGGTGCGCAGTATCCAGAAAGCCGTAAAGGAACTCTGCAAGTCTAACTCCCAG CTGTATCTGGATGGCCCCGGAGTGGAACAGTACAGCCAACACACACAAGTATTCGCCATCCTCAGCGAGACGGTA ACAGGAGACGCGGCAAAGCAGCTCCTCAGACAGACCGTGACCGACTCTTCACTCGCGCAATGCTCTTATGCAATG AAGTTTTACGTCTTCCGAGCAGCAGAAAAGGCGGGTATATACAGCGAGCTATTTCCCAGCATGCTGGATCCATGG CGGGCCATGATGGCCAATAACCTGACAACATGGGCAGAGGATGAGGTGAACGCCCGCAGCGACTGCCATGGGTGG AGCGCCAGTCCGGTGAACGAGATCGTCACGCAGCTGTTCGGGGTGAAACCCGCCGAGCCAGGCTTTGGGCGGGTC CGCATCGAGCCTCGGAGGGAATTAGTGGCTCAGGCTGAGGGCTTGTTGTATACCACTCGGGGGAATATCAAGGTG CAGTGGGGCCCGGGGAAGCCGCTAACTGTCGAGGCGACGAGTAAGATTCAGGTGGAGATTGTGGTTGATAGTCAG GTGGTTAAGAAGGTGCTGGGTCCTGGGGAACCAGTAATATTTTCTTGA |
Gene | >Ani_SJS100_1|g6446.t1 ATGGCTTCGACCGACTGGACTCGCGCTGCCCCTTGGATCTGGCTGCCTAAATATCTCGAGGAAGATAATTGCCCT GGCCGATACTTCCTCTTCAGAAAGGCCTTTCAATGGCACCATTCAGATGACCTACCAAATCTCTTTGTGCACGTC TCCGCCGACAGTCGCTATCGCCTCTTCGTCAACGGTCATCGCGCGAGCTGGGGTCCCTGCAAGTCCTATCCGGGA AAATGGTACTACGAGACAGTGGATATCCGTCCATATCTCCGCGACGGTGACAATGTAATCAGTGCTCGAGTCCTG CGATATTCCACCCTCGTGCCGGGCTCCTCATCTATCGTGAGCATGCCGCTGCCCGGGTTCATGCTGTACTCCCCG CATCCCGAGCTCGCTATTTCCACAGATTCCTCGTGGACGTGCATCGAGCAGCGCTCCGTCAAGATTATCCCGCAG ACCGAGTGGAACTACCTCCTAGGACCGCCCTTCCTATCCAACAACGAACGCGTCGAGGAGGACCAAACCATAACC GGCTGGCAAATGCCTGGATATGATGACGCGGAGTGGGACAAGGCCGTATTCCAGTCCAATGCAGTGAAAATGCTT CCTATGGTGAGCCCGTGGAAGCTGACTCCGCGTCCAATACCAGATCTTCCCGAAAATCCAGGGAAGTTCCACGGT GTGGTCAAAGCCACTGGTTCCGTCAGCGAGGACGAGTGGAATGCACTGATTCGGGAGGACCAGCACGTGGTAATT CCAGCGGATGCGCGGGTGACAGTGGACCTCAGCGTAGACACGCTGATGACGGCGTTTGTCAACTTCGTTTTCAGA GGTGGAGCAGACACACAAATCAGCGTGTTGTACTCAGAGTGTTACGAGAAGGATCTGGGAGTGGAAACGGCGCCA TTCCCCATGCCTAGAACCAAGGGCAATCGCTCTGATGCGAGCGGTCGCTTGTACGGGGTGAAAGATTTCTACAAT GTCACCTCCGGACAGGAGTCCCACTCGTTCGAGCCATTCTGGTTCCGGTGTTTCCGCTACGTGCAACTCGAAATA ACCACCGCTTCCAAACCAATCACATTGACGAGCATATCCCTGCGAGAGACGTCATACCCACTAGAGATTACCACC AAGGTGGACGCAGGTGCCGAGCTCAACAACATTTGGGAGATCAGTCTGCGAACACTCCAGAATTGCCGCCACGAG ACGTACGAAGATTGCCCGTTCTACGAACAGAATCAATTCGCATCAGATTCTCGATTGCAGCTGCTTTTCAGCTAC CAATTATCCCCTGATGACCGTCTCGCCCGCAAGACACTCGAGGAATTCCACGCCAGCCGGACCCCAGACGGGCCC ATAGTGGCACAGTATCCGGCGGGATTCGCTTCTAAGCAGATCCCGCAGTTCTCGCTATTCTGGATCCTGATGGTA CACGATCACATGATGTACTTTGCGGATCGAGCACTAGTGCGCAGATACTTGAGCACAGTCGATAGCATCATTCAG CATTTCGAGGATCGCCTCGATGAGCGTGGTCTAGTGGGACAGTTCGACCCGGATACGTGGCCGTTCGTGGACTGG GTCCAGAATTGGTTCGTTCCGGGCCAGATCTTCAAGTCATGTATGCCTCCAGCGTATCATACTGCGGGCGCGGCC ACTGTCAACAGTTTGATGTATGCTTATGCCCTGCTACATGCGGCAGAGCTGTGCGAGTTTGTGGGGAGGATAAGC ACGGCGGAAGAATACCGGGCGCGGGTGCGCAGTATCCAGAAAGCCGTAAAGGAACTCTGCAAGTCTAACTCCCAG CTGTATCTGGATGGCCCCGGAGTGGAACAGTACAGCCAACACACACAAGTATTCGCCATCCTCAGCGAGACGGTA ACAGGAGACGCGGCAAAGCAGCTCCTCAGACAGACCGTGACCGACTCTTCACTCGCGCAATGCTCTTATGCAATG AAGTTTTACGTCTTCCGAGCAGCAGAAAAGGCGGGTATATACAGCGAGCTATTTCCCAGCATGCTGGATCCATGG CGGGCCATGATGGCCAATAACCTGACAACATGGGCAGAGGATGAGGTGAACGCCCGCAGCGACTGCCATGGGTGG AGCGCCAGTCCGGTGAACGAGATCGTCACGCAGCTGTTCGGGGTGAAACCCGCCGAGCCAGGCTTTGGGCGGGTC CGCATCGAGCCTCGGAGGGAATTAGTGGCTCAGGCTGAGGGCTTGTTGTATACCACTCGGGGGAATATCAAGGTG CAGTGGGGCCCGGGGAAGCCGCTAACTGTCGAGGCGACGAGTAAGATTCAGGTGGAGATTGTGGTTGATAGTCAG GTGGTTAAGAAGGTGCTGGGTCCTGGGGAACCAGTAATATTTTCTTGA |