© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6444.t1 |
| Gene name | |
| Location | scaffold_040:82938..84924 |
| Strand | - |
| Gene length (bp) | 1986 |
| Transcript length (bp) | 1986 |
| Coding sequence length (bp) | 1986 |
| Protein length (aa) | 662 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00072 | Response_reg | Response regulator receiver domain | 9.7E-24 | 539 | 653 |
| PF02518 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 1.7E-22 | 279 | 424 |
| PF00512 | HisKA | His Kinase A (phospho-acceptor) domain | 5.0E-07 | 155 | 226 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000160 | phosphorelay signal transduction system | Yes |
| GO:0000155 | phosphorelay sensor kinase activity | Yes |
| GO:0007165 | signal transduction | Yes |
| GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0140299 | small molecule sensor activity | No |
| GO:0004673 | protein histidine kinase activity | No |
| GO:0050789 | regulation of biological process | No |
| GO:0016740 | transferase activity | No |
| GO:0065007 | biological regulation | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
| GO:0004672 | protein kinase activity | No |
| GO:0016301 | kinase activity | No |
| GO:0035556 | intracellular signal transduction | No |
| GO:0008150 | biological_process | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6444.t1 MQKLTSNNSMGGHPDVSAQQLADMMPIGLAVLDHQDGSVFVNKRFLELTTCTSERAFECWCQSIHPEDFDRVAAA YREASQSYHALRIEYRTRLQPCLWRVCLLTPLEDEDERQRWNLGPEGGFVCTITDITQEKTAELTQRRIVHEAED RKQQQERFIDMISHEVRDPLSAILHCTEDILEAVHSPDTGEEMRTQIAEAADTISLCVAHQKKIIDDVLTYSKLD AAMLTLSPRRVQPRRNVATALAMFRPELRKHDIQFSYELDHSYANLDIDWVMADMDRMSQVLINLLSNAIKFTAS SGDDKRIRVSIGASTQRPSSYPPNVVFFDSGEEALKLDATSQPEWGAGEYAFLMVAVKDTGIGISDEAQKRLFER FNQATPRTQTIYGGSGLGLNVSRKLCHLHGGEIGVSSKEGEGSTFGFFFTVRRTAAGPGEEPTKSNGTTEIDRMC SQIQAMGNEMSGVTERHARPRIPENPTVTHVPEISRHASRDSRRLHTVKIASGVSSPASRASPVSEDEGHEAPEE PRSEPRSHPRERRILLVEDNVINKRILSRKLQTSGFQVSEASNGQEAVDAIQQQGRFDCVLMDQVMPVMDGTTAS RTIRQLDGPMAQVPILGVTANVRTAQKDEMLAAGMNDIIYKPYKMPDLIERIKQLQQTGEE* |
| Coding | >Ani_SJS100_1|g6444.t1 ATGCAGAAATTAACCAGCAATAACTCCATGGGTGGCCATCCAGACGTGTCGGCCCAGCAGCTGGCCGACATGATG CCCATCGGGCTGGCTGTCCTCGACCACCAGGACGGGTCCGTCTTCGTGAACAAGCGCTTCTTGGAATTAACCACC TGCACCTCAGAGCGTGCCTTCGAATGTTGGTGTCAGTCCATCCATCCCGAGGACTTTGATCGCGTGGCAGCAGCA TATCGAGAAGCGTCTCAGTCCTATCATGCCCTACGCATCGAATACCGCACCCGGTTGCAACCGTGCCTGTGGCGC GTGTGCTTGTTGACGCCGCTGGAGGACGAGGACGAGCGACAACGATGGAACCTGGGACCGGAAGGGGGCTTCGTT TGCACCATCACCGACATCACACAAGAGAAGACGGCGGAATTGACGCAGCGTCGCATTGTCCACGAGGCCGAGGAC CGCAAGCAACAGCAGGAGCGGTTTATCGATATGATTAGCCACGAGGTGCGCGACCCGTTATCGGCCATCCTCCAC TGCACCGAGGATATCCTCGAGGCTGTTCATTCGCCAGATACAGGGGAGGAAATGCGCACGCAGATCGCCGAGGCA GCTGACACCATCAGTCTCTGCGTGGCGCATCAGAAGAAGATCATTGACGACGTGCTAACCTACTCCAAACTGGAT GCCGCTATGCTGACGCTCTCTCCTCGACGCGTGCAACCGCGCCGGAATGTAGCCACCGCGTTAGCCATGTTTCGT CCTGAACTGCGCAAGCATGATATCCAATTCTCCTATGAGCTTGACCATTCGTACGCCAACCTGGATATTGATTGG GTCATGGCGGATATGGACCGCATGAGCCAGGTCCTCATCAATTTGCTCTCCAATGCCATCAAGTTCACCGCCAGT TCTGGCGACGACAAGCGCATCCGCGTCTCCATCGGTGCGTCAACCCAACGGCCATCCTCCTATCCTCCGAACGTG GTTTTCTTCGACTCTGGCGAGGAGGCACTGAAGCTCGACGCGACGTCACAACCCGAATGGGGGGCGGGGGAGTAC GCGTTCCTGATGGTGGCCGTTAAAGACACAGGGATTGGCATCAGCGACGAGGCGCAGAAGCGGTTGTTTGAGCGA TTCAACCAGGCGACCCCGCGTACGCAGACAATATACGGTGGGTCGGGTTTAGGTTTGAATGTCAGTCGGAAGCTG TGCCACTTGCACGGGGGAGAGATTGGCGTGAGTTCCAAGGAGGGCGAGGGAAGTACGTTTGGGTTCTTTTTCACG GTTCGACGGACCGCGGCCGGGCCTGGGGAGGAGCCTACCAAGAGCAACGGAACCACGGAGATTGACCGGATGTGC AGCCAGATCCAGGCGATGGGCAACGAGATGAGTGGAGTGACCGAGCGGCACGCCCGGCCACGCATCCCCGAGAAC CCTACTGTCACTCACGTTCCGGAGATCTCACGACACGCTAGTCGAGACAGTCGGCGGCTGCATACAGTGAAAATT GCTAGCGGAGTTTCCTCCCCGGCATCGAGGGCTTCTCCTGTGTCAGAGGACGAGGGTCATGAGGCCCCTGAAGAG CCGCGAAGTGAACCGCGGTCACACCCGCGCGAACGGCGGATTCTGCTTGTAGAAGATAACGTCATTAACAAGCGC ATCCTCTCACGAAAGCTCCAGACCTCCGGCTTTCAGGTCAGCGAAGCGAGTAATGGCCAGGAGGCGGTAGATGCG ATCCAACAGCAGGGGAGGTTCGATTGTGTACTGATGGACCAGGTCATGCCCGTCATGGACGGCACGACGGCCTCC CGGACCATCCGCCAGTTGGACGGTCCCATGGCGCAGGTCCCCATTCTTGGGGTCACAGCCAATGTACGGACGGCC CAGAAGGATGAAATGCTGGCGGCGGGGATGAACGACATTATTTACAAGCCGTATAAAATGCCGGATCTGATCGAG CGGATCAAACAGCTGCAGCAGACGGGTGAAGAATGA |
| Transcript | >Ani_SJS100_1|g6444.t1 ATGCAGAAATTAACCAGCAATAACTCCATGGGTGGCCATCCAGACGTGTCGGCCCAGCAGCTGGCCGACATGATG CCCATCGGGCTGGCTGTCCTCGACCACCAGGACGGGTCCGTCTTCGTGAACAAGCGCTTCTTGGAATTAACCACC TGCACCTCAGAGCGTGCCTTCGAATGTTGGTGTCAGTCCATCCATCCCGAGGACTTTGATCGCGTGGCAGCAGCA TATCGAGAAGCGTCTCAGTCCTATCATGCCCTACGCATCGAATACCGCACCCGGTTGCAACCGTGCCTGTGGCGC GTGTGCTTGTTGACGCCGCTGGAGGACGAGGACGAGCGACAACGATGGAACCTGGGACCGGAAGGGGGCTTCGTT TGCACCATCACCGACATCACACAAGAGAAGACGGCGGAATTGACGCAGCGTCGCATTGTCCACGAGGCCGAGGAC CGCAAGCAACAGCAGGAGCGGTTTATCGATATGATTAGCCACGAGGTGCGCGACCCGTTATCGGCCATCCTCCAC TGCACCGAGGATATCCTCGAGGCTGTTCATTCGCCAGATACAGGGGAGGAAATGCGCACGCAGATCGCCGAGGCA GCTGACACCATCAGTCTCTGCGTGGCGCATCAGAAGAAGATCATTGACGACGTGCTAACCTACTCCAAACTGGAT GCCGCTATGCTGACGCTCTCTCCTCGACGCGTGCAACCGCGCCGGAATGTAGCCACCGCGTTAGCCATGTTTCGT CCTGAACTGCGCAAGCATGATATCCAATTCTCCTATGAGCTTGACCATTCGTACGCCAACCTGGATATTGATTGG GTCATGGCGGATATGGACCGCATGAGCCAGGTCCTCATCAATTTGCTCTCCAATGCCATCAAGTTCACCGCCAGT TCTGGCGACGACAAGCGCATCCGCGTCTCCATCGGTGCGTCAACCCAACGGCCATCCTCCTATCCTCCGAACGTG GTTTTCTTCGACTCTGGCGAGGAGGCACTGAAGCTCGACGCGACGTCACAACCCGAATGGGGGGCGGGGGAGTAC GCGTTCCTGATGGTGGCCGTTAAAGACACAGGGATTGGCATCAGCGACGAGGCGCAGAAGCGGTTGTTTGAGCGA TTCAACCAGGCGACCCCGCGTACGCAGACAATATACGGTGGGTCGGGTTTAGGTTTGAATGTCAGTCGGAAGCTG TGCCACTTGCACGGGGGAGAGATTGGCGTGAGTTCCAAGGAGGGCGAGGGAAGTACGTTTGGGTTCTTTTTCACG GTTCGACGGACCGCGGCCGGGCCTGGGGAGGAGCCTACCAAGAGCAACGGAACCACGGAGATTGACCGGATGTGC AGCCAGATCCAGGCGATGGGCAACGAGATGAGTGGAGTGACCGAGCGGCACGCCCGGCCACGCATCCCCGAGAAC CCTACTGTCACTCACGTTCCGGAGATCTCACGACACGCTAGTCGAGACAGTCGGCGGCTGCATACAGTGAAAATT GCTAGCGGAGTTTCCTCCCCGGCATCGAGGGCTTCTCCTGTGTCAGAGGACGAGGGTCATGAGGCCCCTGAAGAG CCGCGAAGTGAACCGCGGTCACACCCGCGCGAACGGCGGATTCTGCTTGTAGAAGATAACGTCATTAACAAGCGC ATCCTCTCACGAAAGCTCCAGACCTCCGGCTTTCAGGTCAGCGAAGCGAGTAATGGCCAGGAGGCGGTAGATGCG ATCCAACAGCAGGGGAGGTTCGATTGTGTACTGATGGACCAGGTCATGCCCGTCATGGACGGCACGACGGCCTCC CGGACCATCCGCCAGTTGGACGGTCCCATGGCGCAGGTCCCCATTCTTGGGGTCACAGCCAATGTACGGACGGCC CAGAAGGATGAAATGCTGGCGGCGGGGATGAACGACATTATTTACAAGCCGTATAAAATGCCGGATCTGATCGAG CGGATCAAACAGCTGCAGCAGACGGGTGAAGAATGA |
| Gene | >Ani_SJS100_1|g6444.t1 ATGCAGAAATTAACCAGCAATAACTCCATGGGTGGCCATCCAGACGTGTCGGCCCAGCAGCTGGCCGACATGATG CCCATCGGGCTGGCTGTCCTCGACCACCAGGACGGGTCCGTCTTCGTGAACAAGCGCTTCTTGGAATTAACCACC TGCACCTCAGAGCGTGCCTTCGAATGTTGGTGTCAGTCCATCCATCCCGAGGACTTTGATCGCGTGGCAGCAGCA TATCGAGAAGCGTCTCAGTCCTATCATGCCCTACGCATCGAATACCGCACCCGGTTGCAACCGTGCCTGTGGCGC GTGTGCTTGTTGACGCCGCTGGAGGACGAGGACGAGCGACAACGATGGAACCTGGGACCGGAAGGGGGCTTCGTT TGCACCATCACCGACATCACACAAGAGAAGACGGCGGAATTGACGCAGCGTCGCATTGTCCACGAGGCCGAGGAC CGCAAGCAACAGCAGGAGCGGTTTATCGATATGATTAGCCACGAGGTGCGCGACCCGTTATCGGCCATCCTCCAC TGCACCGAGGATATCCTCGAGGCTGTTCATTCGCCAGATACAGGGGAGGAAATGCGCACGCAGATCGCCGAGGCA GCTGACACCATCAGTCTCTGCGTGGCGCATCAGAAGAAGATCATTGACGACGTGCTAACCTACTCCAAACTGGAT GCCGCTATGCTGACGCTCTCTCCTCGACGCGTGCAACCGCGCCGGAATGTAGCCACCGCGTTAGCCATGTTTCGT CCTGAACTGCGCAAGCATGATATCCAATTCTCCTATGAGCTTGACCATTCGTACGCCAACCTGGATATTGATTGG GTCATGGCGGATATGGACCGCATGAGCCAGGTCCTCATCAATTTGCTCTCCAATGCCATCAAGTTCACCGCCAGT TCTGGCGACGACAAGCGCATCCGCGTCTCCATCGGTGCGTCAACCCAACGGCCATCCTCCTATCCTCCGAACGTG GTTTTCTTCGACTCTGGCGAGGAGGCACTGAAGCTCGACGCGACGTCACAACCCGAATGGGGGGCGGGGGAGTAC GCGTTCCTGATGGTGGCCGTTAAAGACACAGGGATTGGCATCAGCGACGAGGCGCAGAAGCGGTTGTTTGAGCGA TTCAACCAGGCGACCCCGCGTACGCAGACAATATACGGTGGGTCGGGTTTAGGTTTGAATGTCAGTCGGAAGCTG TGCCACTTGCACGGGGGAGAGATTGGCGTGAGTTCCAAGGAGGGCGAGGGAAGTACGTTTGGGTTCTTTTTCACG GTTCGACGGACCGCGGCCGGGCCTGGGGAGGAGCCTACCAAGAGCAACGGAACCACGGAGATTGACCGGATGTGC AGCCAGATCCAGGCGATGGGCAACGAGATGAGTGGAGTGACCGAGCGGCACGCCCGGCCACGCATCCCCGAGAAC CCTACTGTCACTCACGTTCCGGAGATCTCACGACACGCTAGTCGAGACAGTCGGCGGCTGCATACAGTGAAAATT GCTAGCGGAGTTTCCTCCCCGGCATCGAGGGCTTCTCCTGTGTCAGAGGACGAGGGTCATGAGGCCCCTGAAGAG CCGCGAAGTGAACCGCGGTCACACCCGCGCGAACGGCGGATTCTGCTTGTAGAAGATAACGTCATTAACAAGCGC ATCCTCTCACGAAAGCTCCAGACCTCCGGCTTTCAGGTCAGCGAAGCGAGTAATGGCCAGGAGGCGGTAGATGCG ATCCAACAGCAGGGGAGGTTCGATTGTGTACTGATGGACCAGGTCATGCCCGTCATGGACGGCACGACGGCCTCC CGGACCATCCGCCAGTTGGACGGTCCCATGGCGCAGGTCCCCATTCTTGGGGTCACAGCCAATGTACGGACGGCC CAGAAGGATGAAATGCTGGCGGCGGGGATGAACGACATTATTTACAAGCCGTATAAAATGCCGGATCTGATCGAG CGGATCAAACAGCTGCAGCAGACGGGTGAAGAATGA |