Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g6436.t1
Gene name
Location	scaffold_040:63603..64656
Strand	-
Gene length (bp)	1053
Transcript length (bp)	993
Coding sequence length (bp)	993
Protein length (aa)	331

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00106	adh_short	short chain dehydrogenase	1.7E-16	21	158

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 59	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g6436.t1 MVKFFQPKIDPLPTGIDLTGKTAVITGASAGMGLEVTKQLLRLRLSTAILAVRNVTKGEACIKSLLQDRGIQTHN PKPTIKVMELDMDRYDSVQQFAKTLREEVPVVDLLILNAGVASLNFERSPSGHERVTQVNYCSNVLLVAELLPHL EAGAEQTGSPARISWVGSRSHETPSFEKKAPIEADEGVLEHMDKEEAFVPFQRYNDTKLLCVLFLYSLAPRLDPK KVVINTMCPGMVNTGMSNMLPLHLRLIFNVIKAIRARPVEVGGWIILNAAVVAGPESHGKFLADKTITEKSAIVT SPMGQDIQKKLWEETITELSKLTTLPPQFR*
Coding	>Ani_SJS100_1\|g6436.t1 ATGGTCAAGTTTTTTCAGCCCAAGATTGATCCCTTGCCTACGGGCATTGACTTGACGGGCAAGACCGCGGTCATC ACCGGTGCCAGTGCAGGTATGGGTCTGGAAGTCACCAAGCAGCTTTTGCGCTTGCGCCTCTCCACCGCCATCCTC GCCGTGCGCAATGTCACCAAAGGGGAGGCCTGCATCAAATCGCTGCTGCAGGACCGCGGCATTCAAACCCACAAC CCCAAACCCACCATCAAGGTCATGGAGCTTGACATGGACCGATATGATAGCGTGCAGCAATTCGCGAAAACTCTC CGCGAAGAGGTTCCGGTGGTTGATCTCCTCATCCTCAATGCGGGGGTTGCTTCTCTGAACTTCGAACGTAGCCCA AGTGGCCACGAGAGGGTGACCCAGGTCAACTACTGCTCCAACGTCCTGCTCGTGGCGGAGCTTCTCCCTCACCTG GAAGCCGGTGCGGAGCAGACCGGTTCCCCTGCCCGGATCAGCTGGGTAGGCAGTCGTTCGCACGAGACACCCAGT TTCGAGAAGAAGGCTCCCATTGAAGCTGACGAGGGGGTCTTGGAGCATATGGACAAGGAGGAAGCTTTTGTCCCT TTCCAACGGTATAATGATACCAAGTTACTCTGTGTGCTGTTCTTGTACAGCCTGGCGCCGCGCCTGGACCCTAAA AAGGTCGTCATCAATACGATGTGTCCGGGTATGGTGAACACCGGGATGAGCAACATGCTCCCACTACATCTGCGC TTGATTTTCAACGTCATCAAAGCCATTCGCGCCCGTCCAGTCGAGGTTGGGGGCTGGATTATCCTGAACGCTGCA GTCGTTGCAGGCCCAGAGTCCCATGGGAAGTTCCTGGCGGATAAGACCATCACCGAAAAATCCGCAATTGTTACC TCCCCGATGGGTCAGGATATTCAAAAGAAACTTTGGGAAGAGACAATCACCGAACTGAGCAAGTTGACCACCCTT CCTCCCCAGTTCCGTTAG
Transcript	>Ani_SJS100_1\|g6436.t1 ATGGTCAAGTTTTTTCAGCCCAAGATTGATCCCTTGCCTACGGGCATTGACTTGACGGGCAAGACCGCGGTCATC ACCGGTGCCAGTGCAGGTATGGGTCTGGAAGTCACCAAGCAGCTTTTGCGCTTGCGCCTCTCCACCGCCATCCTC GCCGTGCGCAATGTCACCAAAGGGGAGGCCTGCATCAAATCGCTGCTGCAGGACCGCGGCATTCAAACCCACAAC CCCAAACCCACCATCAAGGTCATGGAGCTTGACATGGACCGATATGATAGCGTGCAGCAATTCGCGAAAACTCTC CGCGAAGAGGTTCCGGTGGTTGATCTCCTCATCCTCAATGCGGGGGTTGCTTCTCTGAACTTCGAACGTAGCCCA AGTGGCCACGAGAGGGTGACCCAGGTCAACTACTGCTCCAACGTCCTGCTCGTGGCGGAGCTTCTCCCTCACCTG GAAGCCGGTGCGGAGCAGACCGGTTCCCCTGCCCGGATCAGCTGGGTAGGCAGTCGTTCGCACGAGACACCCAGT TTCGAGAAGAAGGCTCCCATTGAAGCTGACGAGGGGGTCTTGGAGCATATGGACAAGGAGGAAGCTTTTGTCCCT TTCCAACGGTATAATGATACCAAGTTACTCTGTGTGCTGTTCTTGTACAGCCTGGCGCCGCGCCTGGACCCTAAA AAGGTCGTCATCAATACGATGTGTCCGGGTATGGTGAACACCGGGATGAGCAACATGCTCCCACTACATCTGCGC TTGATTTTCAACGTCATCAAAGCCATTCGCGCCCGTCCAGTCGAGGTTGGGGGCTGGATTATCCTGAACGCTGCA GTCGTTGCAGGCCCAGAGTCCCATGGGAAGTTCCTGGCGGATAAGACCATCACCGAAAAATCCGCAATTGTTACC TCCCCGATGGGTCAGGATATTCAAAAGAAACTTTGGGAAGAGACAATCACCGAACTGAGCAAGTTGACCACCCTT CCTCCCCAGTTCCGTTAG
Gene	>Ani_SJS100_1\|g6436.t1 ATGGTCAAGTTTTTTCAGCCCAAGATTGATCCCTTGCCTACGGGCATTGACTTGACGGGCAAGACCGCGGTCATC ACCGGTGCCAGTGCAGGTATGGGTCTGGAAGTCACCAAGCAGCTTTTGCGCTTGCGCCTCTCCACCGCCATCCTC GCCGTGCGCAATGTCACCAAAGGGGAGGCCTGCATCAAATCGCTGCTGCAGGACCGCGGCATTCAAACCCACAAC CCCAAACCCACCATCAAGGTCATGGAGCTTGACATGGACCGATATGATAGCGTGCAGCAATTCGCGAAAACTCTC CGCGAAGAGGTTCCGGTGGTTGATCTCCTCATCCTCAATGCGGGGGTTGCTTCTCTGAACTTCGAACGTAGCCCA AGTGGCCACGAGAGGGTGACCCAGGTCAACTACTGCTCCAACGTCCTGCTCGTGGCGGAGCTTCTCCCTCACCTG GAAGCCGGTGCGGAGCAGACCGGTTCCCCTGCCCGGATCAGCTGGGTAGGCAGTCGTTCGCACGAGACACCCAGT TTCGAGAAGAAGGCTCCCATTGAAGCTGACGAGGGGGTCTTGGAGCATATGGACAAGGAGGAAGCTTTTGTCCCT TTCCAACGGTATAATGATACCAAGTTACTCTGTGTGCTGTTCTTGTACAGCCTGGCGCCGCGCCTGGACCCTAAA AAGGTCGTCATCAATACGATGTGTCCGGGTATGGTGAACACCGGGATGAGCAACATGCTCCCACTACATCTGCGC TTGATTTTCAACGTCATCAAAGCCATTCGCGCCCGTCCAGTCGAGGTTGGGGGCTGGATTATCCTGAACGCTGCA GTCGTTGCAGGCCCAGAGTCCCATGGGAAGTTCCTGGCGGATAAGACCATCACCGAGTAAGTCCCTCTTGAGCTT CGTCCCGATAAACCCCACGACTAACATGAATTCTCTTTTAGAAAATCCGCAATTGTTACCTCCCCGATGGGTCAG GATATTCAAAAGAAACTTTGGGAAGAGACAATCACCGAACTGAGCAAGTTGACCACCCTTCCTCCCCAGTTCCGT TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail