Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6436.t1
Gene name
Locationscaffold_040:63603..64656
Strand-
Gene length (bp)1053
Transcript length (bp)993
Coding sequence length (bp)993
Protein length (aa) 331

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.7E-16 21 158

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6436.t1
MVKFFQPKIDPLPTGIDLTGKTAVITGASAGMGLEVTKQLLRLRLSTAILAVRNVTKGEACIKSLLQDRGIQTHN
PKPTIKVMELDMDRYDSVQQFAKTLREEVPVVDLLILNAGVASLNFERSPSGHERVTQVNYCSNVLLVAELLPHL
EAGAEQTGSPARISWVGSRSHETPSFEKKAPIEADEGVLEHMDKEEAFVPFQRYNDTKLLCVLFLYSLAPRLDPK
KVVINTMCPGMVNTGMSNMLPLHLRLIFNVIKAIRARPVEVGGWIILNAAVVAGPESHGKFLADKTITEKSAIVT
SPMGQDIQKKLWEETITELSKLTTLPPQFR*
Coding >Ani_SJS100_1|g6436.t1
ATGGTCAAGTTTTTTCAGCCCAAGATTGATCCCTTGCCTACGGGCATTGACTTGACGGGCAAGACCGCGGTCATC
ACCGGTGCCAGTGCAGGTATGGGTCTGGAAGTCACCAAGCAGCTTTTGCGCTTGCGCCTCTCCACCGCCATCCTC
GCCGTGCGCAATGTCACCAAAGGGGAGGCCTGCATCAAATCGCTGCTGCAGGACCGCGGCATTCAAACCCACAAC
CCCAAACCCACCATCAAGGTCATGGAGCTTGACATGGACCGATATGATAGCGTGCAGCAATTCGCGAAAACTCTC
CGCGAAGAGGTTCCGGTGGTTGATCTCCTCATCCTCAATGCGGGGGTTGCTTCTCTGAACTTCGAACGTAGCCCA
AGTGGCCACGAGAGGGTGACCCAGGTCAACTACTGCTCCAACGTCCTGCTCGTGGCGGAGCTTCTCCCTCACCTG
GAAGCCGGTGCGGAGCAGACCGGTTCCCCTGCCCGGATCAGCTGGGTAGGCAGTCGTTCGCACGAGACACCCAGT
TTCGAGAAGAAGGCTCCCATTGAAGCTGACGAGGGGGTCTTGGAGCATATGGACAAGGAGGAAGCTTTTGTCCCT
TTCCAACGGTATAATGATACCAAGTTACTCTGTGTGCTGTTCTTGTACAGCCTGGCGCCGCGCCTGGACCCTAAA
AAGGTCGTCATCAATACGATGTGTCCGGGTATGGTGAACACCGGGATGAGCAACATGCTCCCACTACATCTGCGC
TTGATTTTCAACGTCATCAAAGCCATTCGCGCCCGTCCAGTCGAGGTTGGGGGCTGGATTATCCTGAACGCTGCA
GTCGTTGCAGGCCCAGAGTCCCATGGGAAGTTCCTGGCGGATAAGACCATCACCGAAAAATCCGCAATTGTTACC
TCCCCGATGGGTCAGGATATTCAAAAGAAACTTTGGGAAGAGACAATCACCGAACTGAGCAAGTTGACCACCCTT
CCTCCCCAGTTCCGTTAG
Transcript >Ani_SJS100_1|g6436.t1
ATGGTCAAGTTTTTTCAGCCCAAGATTGATCCCTTGCCTACGGGCATTGACTTGACGGGCAAGACCGCGGTCATC
ACCGGTGCCAGTGCAGGTATGGGTCTGGAAGTCACCAAGCAGCTTTTGCGCTTGCGCCTCTCCACCGCCATCCTC
GCCGTGCGCAATGTCACCAAAGGGGAGGCCTGCATCAAATCGCTGCTGCAGGACCGCGGCATTCAAACCCACAAC
CCCAAACCCACCATCAAGGTCATGGAGCTTGACATGGACCGATATGATAGCGTGCAGCAATTCGCGAAAACTCTC
CGCGAAGAGGTTCCGGTGGTTGATCTCCTCATCCTCAATGCGGGGGTTGCTTCTCTGAACTTCGAACGTAGCCCA
AGTGGCCACGAGAGGGTGACCCAGGTCAACTACTGCTCCAACGTCCTGCTCGTGGCGGAGCTTCTCCCTCACCTG
GAAGCCGGTGCGGAGCAGACCGGTTCCCCTGCCCGGATCAGCTGGGTAGGCAGTCGTTCGCACGAGACACCCAGT
TTCGAGAAGAAGGCTCCCATTGAAGCTGACGAGGGGGTCTTGGAGCATATGGACAAGGAGGAAGCTTTTGTCCCT
TTCCAACGGTATAATGATACCAAGTTACTCTGTGTGCTGTTCTTGTACAGCCTGGCGCCGCGCCTGGACCCTAAA
AAGGTCGTCATCAATACGATGTGTCCGGGTATGGTGAACACCGGGATGAGCAACATGCTCCCACTACATCTGCGC
TTGATTTTCAACGTCATCAAAGCCATTCGCGCCCGTCCAGTCGAGGTTGGGGGCTGGATTATCCTGAACGCTGCA
GTCGTTGCAGGCCCAGAGTCCCATGGGAAGTTCCTGGCGGATAAGACCATCACCGAAAAATCCGCAATTGTTACC
TCCCCGATGGGTCAGGATATTCAAAAGAAACTTTGGGAAGAGACAATCACCGAACTGAGCAAGTTGACCACCCTT
CCTCCCCAGTTCCGTTAG
Gene >Ani_SJS100_1|g6436.t1
ATGGTCAAGTTTTTTCAGCCCAAGATTGATCCCTTGCCTACGGGCATTGACTTGACGGGCAAGACCGCGGTCATC
ACCGGTGCCAGTGCAGGTATGGGTCTGGAAGTCACCAAGCAGCTTTTGCGCTTGCGCCTCTCCACCGCCATCCTC
GCCGTGCGCAATGTCACCAAAGGGGAGGCCTGCATCAAATCGCTGCTGCAGGACCGCGGCATTCAAACCCACAAC
CCCAAACCCACCATCAAGGTCATGGAGCTTGACATGGACCGATATGATAGCGTGCAGCAATTCGCGAAAACTCTC
CGCGAAGAGGTTCCGGTGGTTGATCTCCTCATCCTCAATGCGGGGGTTGCTTCTCTGAACTTCGAACGTAGCCCA
AGTGGCCACGAGAGGGTGACCCAGGTCAACTACTGCTCCAACGTCCTGCTCGTGGCGGAGCTTCTCCCTCACCTG
GAAGCCGGTGCGGAGCAGACCGGTTCCCCTGCCCGGATCAGCTGGGTAGGCAGTCGTTCGCACGAGACACCCAGT
TTCGAGAAGAAGGCTCCCATTGAAGCTGACGAGGGGGTCTTGGAGCATATGGACAAGGAGGAAGCTTTTGTCCCT
TTCCAACGGTATAATGATACCAAGTTACTCTGTGTGCTGTTCTTGTACAGCCTGGCGCCGCGCCTGGACCCTAAA
AAGGTCGTCATCAATACGATGTGTCCGGGTATGGTGAACACCGGGATGAGCAACATGCTCCCACTACATCTGCGC
TTGATTTTCAACGTCATCAAAGCCATTCGCGCCCGTCCAGTCGAGGTTGGGGGCTGGATTATCCTGAACGCTGCA
GTCGTTGCAGGCCCAGAGTCCCATGGGAAGTTCCTGGCGGATAAGACCATCACCGAGTAAGTCCCTCTTGAGCTT
CGTCCCGATAAACCCCACGACTAACATGAATTCTCTTTTAGAAAATCCGCAATTGTTACCTCCCCGATGGGTCAG
GATATTCAAAAGAAACTTTGGGAAGAGACAATCACCGAACTGAGCAAGTTGACCACCCTTCCTCCCCAGTTCCGT
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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