© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6423.t1 |
| Gene name | |
| Location | scaffold_040:27676..28690 |
| Strand | + |
| Gene length (bp) | 1014 |
| Transcript length (bp) | 1014 |
| Coding sequence length (bp) | 1014 |
| Protein length (aa) | 338 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.3E-13 | 4 | 261 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 45 | 67 | 22 |
| 3 | 74 | 96 | 22 |
| 4 | 106 | 128 | 22 |
| 5 | 149 | 171 | 22 |
| 6 | 186 | 208 | 22 |
| 7 | 213 | 235 | 22 |
| 8 | 245 | 267 | 22 |
| 9 | 276 | 298 | 22 |
| 10 | 302 | 324 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6423.t1 MFLGVLTGPIYDAGYVMPLLYVGSFLVVFGHMMLSLCQSFWQVLLAQSFCVGIGAGLLFVPSIAILSTYFTTKLP FVVGIAASGSSIGGVVYLIMIHILQNEVEFAWSVRIAGFVALFGLAISCLVLRVRALPAARRKLVDWQAFREKPY ALFNIGMFLCFMGLYTPYYYIQSVANEEHITSANLAFYLLPIVNATSTVGRLGIGYFSQMTGPLNALVPCALASG ILVLCLIVGGSQASMLAICAFYGFFSGSLVSLMGPILVILSPHRGMIGTRIGMCFTLLGIALLIGTPIAGSILDS HGAIMVWVYSGVLTLAGGFAIAISRMSQSSWKLIAKT* |
| Coding | >Ani_SJS100_1|g6423.t1 ATGTTTCTCGGAGTTTTGACTGGGCCCATCTATGACGCTGGTTATGTGATGCCTTTGTTATACGTTGGCTCATTT CTTGTTGTCTTTGGTCACATGATGCTCAGTCTTTGTCAAAGTTTTTGGCAAGTTCTTTTAGCGCAGTCATTCTGC GTTGGTATCGGAGCTGGCCTTCTCTTCGTTCCGAGCATTGCGATCCTCTCCACTTACTTCACAACGAAGCTTCCT TTCGTTGTGGGAATAGCCGCATCGGGATCGAGTATTGGTGGTGTCGTTTATCTCATCATGATACATATTCTGCAA AACGAAGTTGAATTTGCGTGGTCCGTCCGCATTGCCGGCTTTGTAGCTCTCTTTGGGCTAGCTATCTCGTGCCTA GTGCTGAGAGTACGCGCACTTCCTGCTGCCCGCCGCAAGCTTGTCGACTGGCAAGCGTTCCGTGAAAAACCTTAT GCACTGTTCAATATCGGCATGTTCTTGTGCTTCATGGGACTCTATACCCCTTACTATTATATCCAGTCTGTCGCT AATGAGGAGCATATAACTTCCGCGAATTTGGCATTCTATCTCCTGCCGATTGTGAACGCAACTTCGACTGTGGGA CGTTTGGGCATTGGCTACTTTTCCCAGATGACCGGGCCACTCAACGCTCTCGTTCCATGCGCTTTGGCGTCTGGA ATTCTTGTGCTTTGCCTAATCGTTGGTGGATCTCAGGCTTCCATGTTGGCAATTTGTGCCTTTTACGGCTTCTTC TCTGGATCGCTTGTTTCACTTATGGGTCCTATCCTTGTGATCCTTTCCCCCCATCGTGGTATGATTGGTACTAGG ATCGGAATGTGTTTCACTCTTTTGGGTATTGCCTTGTTGATTGGAACCCCAATCGCCGGCTCTATTCTTGACTCC CATGGTGCGATTATGGTTTGGGTTTACAGCGGTGTCTTGACACTGGCTGGTGGCTTCGCGATAGCGATTAGTCGT ATGAGTCAATCGTCTTGGAAGCTCATTGCGAAAACTTGA |
| Transcript | >Ani_SJS100_1|g6423.t1 ATGTTTCTCGGAGTTTTGACTGGGCCCATCTATGACGCTGGTTATGTGATGCCTTTGTTATACGTTGGCTCATTT CTTGTTGTCTTTGGTCACATGATGCTCAGTCTTTGTCAAAGTTTTTGGCAAGTTCTTTTAGCGCAGTCATTCTGC GTTGGTATCGGAGCTGGCCTTCTCTTCGTTCCGAGCATTGCGATCCTCTCCACTTACTTCACAACGAAGCTTCCT TTCGTTGTGGGAATAGCCGCATCGGGATCGAGTATTGGTGGTGTCGTTTATCTCATCATGATACATATTCTGCAA AACGAAGTTGAATTTGCGTGGTCCGTCCGCATTGCCGGCTTTGTAGCTCTCTTTGGGCTAGCTATCTCGTGCCTA GTGCTGAGAGTACGCGCACTTCCTGCTGCCCGCCGCAAGCTTGTCGACTGGCAAGCGTTCCGTGAAAAACCTTAT GCACTGTTCAATATCGGCATGTTCTTGTGCTTCATGGGACTCTATACCCCTTACTATTATATCCAGTCTGTCGCT AATGAGGAGCATATAACTTCCGCGAATTTGGCATTCTATCTCCTGCCGATTGTGAACGCAACTTCGACTGTGGGA CGTTTGGGCATTGGCTACTTTTCCCAGATGACCGGGCCACTCAACGCTCTCGTTCCATGCGCTTTGGCGTCTGGA ATTCTTGTGCTTTGCCTAATCGTTGGTGGATCTCAGGCTTCCATGTTGGCAATTTGTGCCTTTTACGGCTTCTTC TCTGGATCGCTTGTTTCACTTATGGGTCCTATCCTTGTGATCCTTTCCCCCCATCGTGGTATGATTGGTACTAGG ATCGGAATGTGTTTCACTCTTTTGGGTATTGCCTTGTTGATTGGAACCCCAATCGCCGGCTCTATTCTTGACTCC CATGGTGCGATTATGGTTTGGGTTTACAGCGGTGTCTTGACACTGGCTGGTGGCTTCGCGATAGCGATTAGTCGT ATGAGTCAATCGTCTTGGAAGCTCATTGCGAAAACTTGA |
| Gene | >Ani_SJS100_1|g6423.t1 ATGTTTCTCGGAGTTTTGACTGGGCCCATCTATGACGCTGGTTATGTGATGCCTTTGTTATACGTTGGCTCATTT CTTGTTGTCTTTGGTCACATGATGCTCAGTCTTTGTCAAAGTTTTTGGCAAGTTCTTTTAGCGCAGTCATTCTGC GTTGGTATCGGAGCTGGCCTTCTCTTCGTTCCGAGCATTGCGATCCTCTCCACTTACTTCACAACGAAGCTTCCT TTCGTTGTGGGAATAGCCGCATCGGGATCGAGTATTGGTGGTGTCGTTTATCTCATCATGATACATATTCTGCAA AACGAAGTTGAATTTGCGTGGTCCGTCCGCATTGCCGGCTTTGTAGCTCTCTTTGGGCTAGCTATCTCGTGCCTA GTGCTGAGAGTACGCGCACTTCCTGCTGCCCGCCGCAAGCTTGTCGACTGGCAAGCGTTCCGTGAAAAACCTTAT GCACTGTTCAATATCGGCATGTTCTTGTGCTTCATGGGACTCTATACCCCTTACTATTATATCCAGTCTGTCGCT AATGAGGAGCATATAACTTCCGCGAATTTGGCATTCTATCTCCTGCCGATTGTGAACGCAACTTCGACTGTGGGA CGTTTGGGCATTGGCTACTTTTCCCAGATGACCGGGCCACTCAACGCTCTCGTTCCATGCGCTTTGGCGTCTGGA ATTCTTGTGCTTTGCCTAATCGTTGGTGGATCTCAGGCTTCCATGTTGGCAATTTGTGCCTTTTACGGCTTCTTC TCTGGATCGCTTGTTTCACTTATGGGTCCTATCCTTGTGATCCTTTCCCCCCATCGTGGTATGATTGGTACTAGG ATCGGAATGTGTTTCACTCTTTTGGGTATTGCCTTGTTGATTGGAACCCCAATCGCCGGCTCTATTCTTGACTCC CATGGTGCGATTATGGTTTGGGTTTACAGCGGTGTCTTGACACTGGCTGGTGGCTTCGCGATAGCGATTAGTCGT ATGAGTCAATCGTCTTGGAAGCTCATTGCGAAAACTTGA |