© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6422.t1 |
| Gene name | |
| Location | scaffold_040:24063..25730 |
| Strand | + |
| Gene length (bp) | 1667 |
| Transcript length (bp) | 1617 |
| Coding sequence length (bp) | 1617 |
| Protein length (aa) | 539 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.5E-37 | 66 | 447 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.5E-14 | 79 | 300 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 53 | 75 | 22 |
| 2 | 90 | 112 | 22 |
| 3 | 119 | 141 | 22 |
| 4 | 145 | 167 | 22 |
| 5 | 179 | 201 | 22 |
| 6 | 216 | 238 | 22 |
| 7 | 278 | 300 | 22 |
| 8 | 320 | 342 | 22 |
| 9 | 366 | 388 | 22 |
| 10 | 398 | 420 | 22 |
| 11 | 427 | 449 | 22 |
| 12 | 459 | 481 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6422.t1 MASIVRVLSHVVNKPYHTKDLPQERPYLNENGFVDFAPGDIENPRNWSIRRRIVITVSSILLLVNATFASSSPTG CFESMSEHFGVSTEVAGLTITLFLLGYCAGPLIFAPLSEFYGRRWIFYITFLLYIAFNFLCAFAPNLGGLLVGRF LTGTFVSASLSNGPGLLADLWDPLQRANAMAGFAAMVWIGPALGPVAAGFLELKEDWQWSFYMLLWLGGATAFVL LTIPETYAPTILYTKAKRIREARIPGYENVKAAVEDGNRSLVAIYKVALTRPWVILFDPISLLCAIYMAVVYMML YMLFSIYPIVFQEKRGWNSGVGELPLLGTVVGAVFGGLIVLFDTRMRTKRIERGEKTLADTTPEDRLPLAMIGGV GFSAAMFWFAWTAEFNYIHWIVPTIAGGFLTAAMLLIFVAYLNYLVDVYMMYAASAIAANTIARSACGAAAPLFT NQMFAAMGVGGGGSLVGGVAALLAVVPFLFYKYGKQIRAKSKFAPTSAPQQQKRDVESSPQDATLRPDSSSTSTE SEGLRSETGKNRF* |
| Coding | >Ani_SJS100_1|g6422.t1 ATGGCATCTATAGTGCGCGTCCTCTCGCACGTTGTGAACAAACCATACCACACCAAAGACCTCCCACAAGAAAGA CCCTATCTAAACGAGAATGGCTTTGTCGACTTCGCTCCGGGTGATATCGAGAACCCACGCAACTGGTCCATTCGC CGCCGCATAGTGATCACCGTCAGCTCCATTTTGCTTCTGGTAAACGCCACGTTCGCATCTAGCTCGCCGACAGGC TGCTTCGAGTCCATGTCCGAGCATTTCGGTGTCTCAACCGAAGTTGCGGGACTCACAATCACATTGTTCTTGCTG GGCTACTGCGCCGGGCCGCTCATCTTCGCCCCGCTAAGCGAATTCTACGGCCGTCGCTGGATCTTCTACATTACA TTTCTACTATACATCGCCTTCAACTTCCTGTGTGCCTTTGCACCGAACCTGGGCGGACTACTCGTCGGTCGCTTC CTGACAGGGACATTCGTCTCTGCGTCTCTGAGTAATGGCCCGGGCCTCCTGGCCGACCTGTGGGATCCACTGCAG CGCGCAAATGCCATGGCAGGCTTTGCGGCTATGGTCTGGATTGGGCCTGCGCTAGGCCCTGTCGCGGCGGGATTC TTGGAGTTGAAGGAAGATTGGCAGTGGAGCTTTTATATGCTTCTTTGGTTGGGTGGAGCGACGGCCTTTGTGTTA CTGACTATTCCGGAGACGTACGCGCCGACGATCCTGTACACAAAGGCGAAGCGTATTCGTGAGGCGCGCATCCCG GGGTATGAGAATGTGAAAGCTGCGGTTGAGGATGGCAATCGCTCGCTGGTTGCGATCTACAAGGTTGCACTTACA AGGCCTTGGGTTATTCTTTTTGATCCCATCTCGTTGTTGTGTGCGATCTATATGGCGGTGGTATATATGATGCTG TATATGCTTTTTAGCATCTATCCCATCGTCTTCCAGGAAAAGCGGGGGTGGAACTCGGGCGTTGGCGAGTTGCCG TTGCTTGGCACTGTTGTTGGTGCGGTTTTCGGCGGGCTGATTGTTCTCTTCGATACGAGGATGCGCACGAAACGA ATTGAGAGAGGAGAAAAGACGTTGGCAGATACCACACCTGAAGACCGGTTACCGCTAGCGATGATTGGGGGTGTA GGATTCTCGGCTGCTATGTTTTGGTTTGCGTGGACGGCAGAGTTCAATTATATTCACTGGATCGTCCCTACGATA GCCGGTGGCTTTCTAACAGCCGCTATGCTTCTTATTTTCGTCGCATACTTGAACTACCTCGTTGACGTGTACATG ATGTACGCTGCTTCCGCAATCGCCGCGAATACTATTGCACGATCGGCCTGTGGTGCTGCAGCGCCTCTTTTCACC AACCAAATGTTCGCCGCAATGGGCGTGGGTGGTGGCGGTAGCCTTGTCGGGGGTGTTGCTGCATTACTGGCAGTG GTACCGTTCTTGTTCTACAAGTATGGGAAGCAAATTCGGGCCAAGAGTAAATTCGCGCCGACTTCGGCTCCACAA CAACAAAAGAGAGATGTGGAGAGTAGCCCTCAGGATGCCACTCTTCGCCCTGACTCTTCGTCTACTTCCACGGAG TCGGAAGGGCTTAGATCGGAGACTGGGAAAAATCGGTTTTAA |
| Transcript | >Ani_SJS100_1|g6422.t1 ATGGCATCTATAGTGCGCGTCCTCTCGCACGTTGTGAACAAACCATACCACACCAAAGACCTCCCACAAGAAAGA CCCTATCTAAACGAGAATGGCTTTGTCGACTTCGCTCCGGGTGATATCGAGAACCCACGCAACTGGTCCATTCGC CGCCGCATAGTGATCACCGTCAGCTCCATTTTGCTTCTGGTAAACGCCACGTTCGCATCTAGCTCGCCGACAGGC TGCTTCGAGTCCATGTCCGAGCATTTCGGTGTCTCAACCGAAGTTGCGGGACTCACAATCACATTGTTCTTGCTG GGCTACTGCGCCGGGCCGCTCATCTTCGCCCCGCTAAGCGAATTCTACGGCCGTCGCTGGATCTTCTACATTACA TTTCTACTATACATCGCCTTCAACTTCCTGTGTGCCTTTGCACCGAACCTGGGCGGACTACTCGTCGGTCGCTTC CTGACAGGGACATTCGTCTCTGCGTCTCTGAGTAATGGCCCGGGCCTCCTGGCCGACCTGTGGGATCCACTGCAG CGCGCAAATGCCATGGCAGGCTTTGCGGCTATGGTCTGGATTGGGCCTGCGCTAGGCCCTGTCGCGGCGGGATTC TTGGAGTTGAAGGAAGATTGGCAGTGGAGCTTTTATATGCTTCTTTGGTTGGGTGGAGCGACGGCCTTTGTGTTA CTGACTATTCCGGAGACGTACGCGCCGACGATCCTGTACACAAAGGCGAAGCGTATTCGTGAGGCGCGCATCCCG GGGTATGAGAATGTGAAAGCTGCGGTTGAGGATGGCAATCGCTCGCTGGTTGCGATCTACAAGGTTGCACTTACA AGGCCTTGGGTTATTCTTTTTGATCCCATCTCGTTGTTGTGTGCGATCTATATGGCGGTGGTATATATGATGCTG TATATGCTTTTTAGCATCTATCCCATCGTCTTCCAGGAAAAGCGGGGGTGGAACTCGGGCGTTGGCGAGTTGCCG TTGCTTGGCACTGTTGTTGGTGCGGTTTTCGGCGGGCTGATTGTTCTCTTCGATACGAGGATGCGCACGAAACGA ATTGAGAGAGGAGAAAAGACGTTGGCAGATACCACACCTGAAGACCGGTTACCGCTAGCGATGATTGGGGGTGTA GGATTCTCGGCTGCTATGTTTTGGTTTGCGTGGACGGCAGAGTTCAATTATATTCACTGGATCGTCCCTACGATA GCCGGTGGCTTTCTAACAGCCGCTATGCTTCTTATTTTCGTCGCATACTTGAACTACCTCGTTGACGTGTACATG ATGTACGCTGCTTCCGCAATCGCCGCGAATACTATTGCACGATCGGCCTGTGGTGCTGCAGCGCCTCTTTTCACC AACCAAATGTTCGCCGCAATGGGCGTGGGTGGTGGCGGTAGCCTTGTCGGGGGTGTTGCTGCATTACTGGCAGTG GTACCGTTCTTGTTCTACAAGTATGGGAAGCAAATTCGGGCCAAGAGTAAATTCGCGCCGACTTCGGCTCCACAA CAACAAAAGAGAGATGTGGAGAGTAGCCCTCAGGATGCCACTCTTCGCCCTGACTCTTCGTCTACTTCCACGGAG TCGGAAGGGCTTAGATCGGAGACTGGGAAAAATCGGTTTTAA |
| Gene | >Ani_SJS100_1|g6422.t1 ATGGCATCTATAGTGCGCGTCCTCTCGCACGTTGTGAACAAACCATACCACACCAAAGACCTCCCACAAGAAAGA CCCTATCTAAACGAGAATGGCTTTGTCGACTTCGCTCCGGGTGATATCGAGAACCCACGCAACTGGTCCATTCGC CGCCGCATAGTGATCACCGTCAGCTCCATTTTGCTTCTGGTAAACGCCACGTTCGCATCTAGCTCGCCGACAGGC TGCTTCGAGTCCATGTCCGAGCATTTCGGTGTCTCAACCGAAGTTGCGGGACTCACAATCACATTGTTCTTGCTG GGCTACTGCGCCGGGCCGCTCATCTTCGCCCCGCTAAGCGAATTCTACGGCCGTCGCTGGATCTTCTACATTACA TTTCTACTATACATCGCCTTCAACTTCCTGTGTGCCTTTGCACCGAACCTGGGCGGACTACTCGTCGGTCGCTTC CTGACAGGGACATTCGTCTCTGCGTCTCTGAGTAATGGCCCGGGCCTCCTGGCCGACCTGTGGGATCCACTGCAG CGCGCAAATGCCATGGCAGGCTTTGCGGCTATGGTCTGGATTGGGCCTGCGCTAGGCCCTGTCGCGGCGGGATTC TTGGAGTTGAAGGAAGATTGGCAGTGGAGCTTTTATATGCTTCTTTGGTTGGGTGGAGCGACGGCCTTTGTGTTA CTGACTATTCCGGAGACGTACGCGCCGACGATCCTGTACACAAAGGCGAAGCGTATTCGTGAGGCGCGCATCCCG GGGTATGAGAATGTGAAAGCTGCGGTTGAGGATGGCAATCGCTCGCTGGTTGCGATCTACAAGGTTGCACTTACA AGGCCTTGGGTTATTCTTTTTGATCCCATCTCGTTGTTGTGTGCGATCTATATGGCGGTGGTATATATGATGCTG TATATGCTTTTTAGCATCTATCCCATCGTCTTCCAGGAAAAGCGGGGGTGGAACTCGGGCGTTGGCGAGTTGCCG TTGCTTGGCACTGTTGTTGGTGCGGTTTTCGGCGGGCTGATTGTTCTCTTCGATACGAGGATGCGCACGAAACGA ATTGAGAGAGGAGAAAAGACGTTGGCAGATACCACACCTGAAGACCGGTTACCGCTAGCGATGATTGGGGGTGTA GGATTCTCGGCTGCTATGTTTTGGTTTGCGTGGACGGCAGAGTTCAAGTAAGTTTCTCAGTGAATCTGAGGTTTG TTCAAATGTTAACAATCATCAGTTATATTCACTGGATCGTCCCTACGATAGCCGGTGGCTTTCTAACAGCCGCTA TGCTTCTTATTTTCGTCGCATACTTGAACTACCTCGTTGACGTGTACATGATGTACGCTGCTTCCGCAATCGCCG CGAATACTATTGCACGATCGGCCTGTGGTGCTGCAGCGCCTCTTTTCACCAACCAAATGTTCGCCGCAATGGGCG TGGGTGGTGGCGGTAGCCTTGTCGGGGGTGTTGCTGCATTACTGGCAGTGGTACCGTTCTTGTTCTACAAGTATG GGAAGCAAATTCGGGCCAAGAGTAAATTCGCGCCGACTTCGGCTCCACAACAACAAAAGAGAGATGTGGAGAGTA GCCCTCAGGATGCCACTCTTCGCCCTGACTCTTCGTCTACTTCCACGGAGTCGGAAGGGCTTAGATCGGAGACTG GGAAAAATCGGTTTTAA |