Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6413.t1
Gene name
Locationscaffold_039:286031..286577
Strand-
Gene length (bp)546
Transcript length (bp)381
Coding sequence length (bp)381
Protein length (aa) 127

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05129 Elf1 Transcription elongation factor Elf1 like 1.2E-29 2 79

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6413.t1
MGKRKKSSRQPQQPRKREPLPTTFACLFCNHENSIVVKLDKKLGLGNLSCKVCGQRFQTGINYLSAAVDVYSDWV
DACDAVAKDTATKYEDSDPRVRRSNDFATSPSARDVGFEEADRNDTYADEY*
Coding >Ani_SJS100_1|g6413.t1
ATGGGTAAGCGGAAGAAGTCCAGCAGGCAACCACAGCAACCCAGAAAGAGAGAACCGTTGCCTACGACATTTGCC
TGCCTTTTCTGCAATCACGAGAACTCCATCGTCGTAAAACTAGACAAGAAACTTGGCCTAGGAAATTTGTCCTGC
AAAGTCTGTGGCCAGCGATTTCAGACGGGCATAAACTATCTCTCCGCTGCTGTTGATGTATACTCGGATTGGGTG
GATGCCTGTGACGCGGTTGCCAAGGATACTGCTACCAAGTACGAGGATAGTGATCCTCGTGTCCGACGTTCGAAT
GATTTTGCTACCTCTCCCAGCGCTCGAGATGTTGGGTTTGAGGAAGCGGATCGGAACGATACATATGCCGATGAA
TACTGA
Transcript >Ani_SJS100_1|g6413.t1
ATGGGTAAGCGGAAGAAGTCCAGCAGGCAACCACAGCAACCCAGAAAGAGAGAACCGTTGCCTACGACATTTGCC
TGCCTTTTCTGCAATCACGAGAACTCCATCGTCGTAAAACTAGACAAGAAACTTGGCCTAGGAAATTTGTCCTGC
AAAGTCTGTGGCCAGCGATTTCAGACGGGCATAAACTATCTCTCCGCTGCTGTTGATGTATACTCGGATTGGGTG
GATGCCTGTGACGCGGTTGCCAAGGATACTGCTACCAAGTACGAGGATAGTGATCCTCGTGTCCGACGTTCGAAT
GATTTTGCTACCTCTCCCAGCGCTCGAGATGTTGGGTTTGAGGAAGCGGATCGGAACGATACATATGCCGATGAA
TACTGA
Gene >Ani_SJS100_1|g6413.t1
ATGGTATGCCACTCTACACAGCGCCAATGTACCTTTCTCTAAGCTTTCCTTGAATTTAGGGTAAGCGGAAGAAGT
CCAGCAGGCAACCACAGCAACCCAGAAAGGTGACCACCTTCTGATTCTTCAGGGTTACCGTCGCTAATACTCAAC
TAGAGAGAACCGTTGCCTACGACATTTGCCTGCCTTTTCTGCAATCACGAGAACTCCATCGTCGTAAAACTAGAC
AAGAAACTTGGCCTAGGAAATTTGTCCTGCAAAGTCTGTGGCCAGCGATTTCAGACGGGCATAAACTGTGCGTTC
ATGTTTATGATTTCTCCTAAGTGAGTGGCATTTGCTCATGATATATACATAGATCTCTCCGCTGCTGTTGATGTA
TACTCGGATTGGGTGGATGCCTGTGACGCGGTTGCCAAGGATACTGCTACCAAGTACGAGGATAGTGATCCTCGT
GTCCGACGTTCGAATGATTTTGCTACCTCTCCCAGCGCTCGAGATGTTGGGTTTGAGGAAGCGGATCGGAACGAT
ACATATGCCGATGAATACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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