Protein ID | Ani_SJS100_1|g6390.t1 |
Gene name | |
Location | scaffold_039:225494..226915 |
Strand | - |
Gene length (bp) | 1421 |
Transcript length (bp) | 1221 |
Coding sequence length (bp) | 1221 |
Protein length (aa) | 407 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10607 | CTLH | CTLH/CRA C-terminal to LisH motif domain | 7.2E-35 | 165 | 308 |
Orthofinder run ID | 3 |
Orthogroup | 6680 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6390.t1 MAAELTSTRLNAENHLLLDQPLLRLPHELARRNFKSVQRLVEREKEYVLPALKETANASLSNEQTPDQALAALDA MISRMQGLKRKMENLHQEERKIQEQSRKRIQHLEKLHQIPSLADVQYDQWARVRLDRLMIDHMLRSGYIKSAQQL AREKGIEDLVDLNVFVQCQRIAESLRTGETKDALQWCGENKAALKKSQYNLEFELRLQQYIEMVRAGHKERFNDA MIHAKRYLAPYLETQSVEIHRAAGLLAFPPDTKAEPYKSMYAHERWAYLSDLFVRTHHELLSLSSRPLLHIALSA GLSALKTPSCHSAYTSSSSNSLSTTTSVCPICSTELNELARNMPYAHHTKSYVENDPIVLPNGRIYGQQRLLEMS KKVGCVEVGKVKDPTTGEVFNEGDMKKVYIM* |
Coding | >Ani_SJS100_1|g6390.t1 ATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCTCTTGGACCAACCTCTCCTGCGCTTA CCACATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGAGCGAGAAAAGGAGTACGTCCTCCCC GCACTCAAGGAGACCGCCAATGCATCCTTATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCT ATGATTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCAGGAGGAAAGAAAAATTCAAGAGCAG TCCCGGAAGCGTATCCAGCACCTAGAGAAACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGG GCGAGGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGGATATATCAAAAGTGCCCAGCAATTA GCTCGTGAAAAGGGGATCGAGGATCTTGTAGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGCCTA CGCACTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGCAGCGCTGAAGAAGAGTCAGTATAAT CTGGAATTCGAACTCCGATTGCAGCAATACATTGAAATGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCT ATGATCCACGCCAAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGTGGAGATTCATCGAGCTGCAGGACTC CTCGCTTTTCCTCCGGACACCAAAGCTGAGCCGTACAAGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCC GACCTCTTTGTCCGCACTCACCATGAGCTTTTGTCACTATCTTCTCGTCCTTTGTTACACATCGCTCTGTCTGCG GGATTGTCGGCTCTCAAAACTCCTTCGTGCCATTCGGCCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACA ACATCTGTTTGTCCAATTTGTTCGACCGAGCTTAACGAGCTCGCACGTAACATGCCATATGCTCACCACACGAAG AGCTACGTTGAGAACGACCCGATTGTGCTCCCAAATGGCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGC AAGAAAGTCGGTTGTGTTGAGGTTGGTAAAGTAAAGGACCCTACGACAGGTGAAGTATTCAACGAGGGTGATATG AAGAAAGTCTACATCATGTAA |
Transcript | >Ani_SJS100_1|g6390.t1 ATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCTCTTGGACCAACCTCTCCTGCGCTTA CCACATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGAGCGAGAAAAGGAGTACGTCCTCCCC GCACTCAAGGAGACCGCCAATGCATCCTTATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCT ATGATTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCAGGAGGAAAGAAAAATTCAAGAGCAG TCCCGGAAGCGTATCCAGCACCTAGAGAAACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGG GCGAGGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGGATATATCAAAAGTGCCCAGCAATTA GCTCGTGAAAAGGGGATCGAGGATCTTGTAGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGCCTA CGCACTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGCAGCGCTGAAGAAGAGTCAGTATAAT CTGGAATTCGAACTCCGATTGCAGCAATACATTGAAATGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCT ATGATCCACGCCAAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGTGGAGATTCATCGAGCTGCAGGACTC CTCGCTTTTCCTCCGGACACCAAAGCTGAGCCGTACAAGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCC GACCTCTTTGTCCGCACTCACCATGAGCTTTTGTCACTATCTTCTCGTCCTTTGTTACACATCGCTCTGTCTGCG GGATTGTCGGCTCTCAAAACTCCTTCGTGCCATTCGGCCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACA ACATCTGTTTGTCCAATTTGTTCGACCGAGCTTAACGAGCTCGCACGTAACATGCCATATGCTCACCACACGAAG AGCTACGTTGAGAACGACCCGATTGTGCTCCCAAATGGCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGC AAGAAAGTCGGTTGTGTTGAGGTTGGTAAAGTAAAGGACCCTACGACAGGTGAAGTATTCAACGAGGGTGATATG AAGAAAGTCTACATCATGTAA |
Gene | >Ani_SJS100_1|g6390.t1 ATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCTCTTGGTATTGAACTCTTCGCCCCCT ACCTATTGCTGGCTTGCACCCCATTCTGATACTAATTCTGTCGACTACTTGCAGGACCAACCTCTCCTGCGCTTA CCACATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGAGCGAGAAAAGGAGTACGTCCTCCCC GCACTCAAGGAGACCGCCAATGCATCCTTATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCT ATGATTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCAGGAGGAAAGAAAAATTCAAGAGCAG TCCCGGAAGCGTATCCAGCACCTAGAGAAACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGG GCGAGGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGGATATATCAAAAGTGCCCAGCAATTA GCTCGTGAAAAGGGGATCGAGGATCTTGTAGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGCCTA CGCACTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGCAGCGCTGAAGAAGAGTCAGGTTTGT CTAACATCCAACAATGATCACGGAGCTATATGCCAGAGTCCAATTTTAACCCAAAATTACAGTATAATCTGGAAT TCGAACTCCGATTGCAGCAATACATTGAAATGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCTATGATCC ACGCCAAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGTGGAGATTCATCGAGCTGCAGGACTCCTCGCTT TTCCTCCGGACACCAAAGCTGAGCCGTACAAGGTAATGGGGATATTGAACACACTCTCAGGAAAACTGTACAAAC TAACTCACCCCTAGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCCGACCTCTTTGTCCGCACTCACCATG AGCTTTTGTCACTATCTTCTCGTCCTTTGTTACACATCGCTCTGTCTGCGGGATTGTCGGCTCTCAAAACTCCTT CGTGCCATTCGGCCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACAACATCTGTTTGTCCAATTTGTTCGA CCGAGCTTAACGAGCTCGCACGTAACATGCCATATGCTCACCACACGAAGAGCTACGTTGAGAACGACCCGATTG TGCTCCCAAATGGCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGCAAGAAAGTCGGTTGTGTTGAGGTTG GTAAAGTAAAGGACCCTACGACAGGTGAAGTATTCAACGAGGGTGATATGAAGAAAGTCTACATCATGTAA |