© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g637.t1 |
| Gene name | |
| Location | scaffold_002:612042..613382 |
| Strand | - |
| Gene length (bp) | 1340 |
| Transcript length (bp) | 1224 |
| Coding sequence length (bp) | 1224 |
| Protein length (aa) | 408 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03114 | BAR | BAR domain | 4.0E-69 | 6 | 246 |
| PF00018 | SH3_1 | SH3 domain | 2.2E-14 | 354 | 401 |
| PF14604 | SH3_9 | Variant SH3 domain | 1.2E-12 | 355 | 405 |
| PF07653 | SH3_2 | Variant SH3 domain | 2.6E-10 | 355 | 405 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005737 | cytoplasm | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005488 | binding | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 55 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g637.t1 MSLKGFQKSIVRAPQQFKAKFNIGEHTKDPVYLDAERRFQELEKETKKLHDESKKYFDAINGMLNHQIGFSKAMT ELYKPISGRASDPSSYTIEGNPEGIRACEEYEAIVRDLQESLVPELEMIDTRVISPAQQLLEVIKVIRKVAVKRD HKKLDYDRHKNSLKKLQDKKDKSLKDEKALYKAENDVEQATQDYNYYNDLLKDELPKLFALEAEFIRPLFQSFYY MQLNVFYTLHERMQGINIGYFDLNLDIEEAFENKRGDVKERAEELSIVHFKATGGRKPGSKLGPKDKLAQEGKSG YASRQRDPDVVENPPPPYSATAGSSFTAAAKSKPAPPPPKPKPARFSAPVETVTALYDYEAQAHGDLSFSAGDVI EITQRTDNQNEWWSGRVDGREGQFPANYVQLN* |
| Coding | >Ani_SJS100_1|g637.t1 ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTTCAATATTGGCGAG CATACCAAGGACCCTGTCTACCTGGACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGCATGTTGAACCACCAGATTGGATTCTCCAAAGCGATGACG GAACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATC CGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGAC ACCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGAC CACAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAG GATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTG CTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTAC ATGCAACTGAACGTCTTCTACACACTACACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTG GACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTT AAAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGT TACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGC TTTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTC GAAACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATC GAGATCACACAGCGAACGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCT GCAAACTACGTCCAGCTGAACTAG |
| Transcript | >Ani_SJS100_1|g637.t1 ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTTCAATATTGGCGAG CATACCAAGGACCCTGTCTACCTGGACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGCATGTTGAACCACCAGATTGGATTCTCCAAAGCGATGACG GAACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATC CGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGAC ACCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGAC CACAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAG GATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTG CTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTAC ATGCAACTGAACGTCTTCTACACACTACACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTG GACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTT AAAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGT TACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGC TTTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTC GAAACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATC GAGATCACACAGCGAACGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCT GCAAACTACGTCCAGCTGAACTAG |
| Gene | >Ani_SJS100_1|g637.t1 ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTTCAATATTGGCGAG CATACCAAGGACCCTGTCTACCTGGACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGTACACACGGATCCCCCGTCTCGCAGCTACCCCTCCTTTTG CTGACTGGCGTATTTTTCCAGGCATGTTGAACCACCAGATTGGATTCTCCAAAGCGATGACGGAACTCTACAAAC CCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGG AATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATCA GCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGG ACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGC TTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAGGACTACAACTACTACAACGACCTGCTCAAGGACGAGT TGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAACG TCTTCTACACACTACACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAG CGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCG GGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTC AGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAG CGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGG CACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAGC GAACGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCTGGTGAGCATGACC GGCTGTCATTATCAAAACATACCTCGCTAACTTGTATTCCAGCAAACTACGTCCAGCTGAACTAG |