© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6365.t1 |
| Gene name | |
| Location | scaffold_039:145213..145978 |
| Strand | + |
| Gene length (bp) | 765 |
| Transcript length (bp) | 501 |
| Coding sequence length (bp) | 501 |
| Protein length (aa) | 167 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04099 | Sybindin | Sybindin-like family | 4.9E-26 | 3 | 163 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016192 | vesicle-mediated transport | Yes |
| GO:0030008 | TRAPP complex | Yes |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0032991 | protein-containing complex | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0099023 | vesicle tethering complex | No |
| GO:0140535 | intracellular protein-containing complex | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6365.t1 MVVYSFYIFDRHAECIYNRRWLPRPTSMTGSKSSRPTSETSAPGLPATLGQTARATDDDAKLIFGTVFSLRNMVR KLGGEDDNFVTYRTSQYKLHYYETPTNIKFVMLTDLKSPSMRVALQQIYINLYVEYVVKNPLSPAEHPGGIGVNN ELFEESLEQFVTRVLS* |
| Coding | >Ani_SJS100_1|g6365.t1 ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCA ACCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGC CAAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGC AAGCTAGGAGGCGAGGACGACAACTTCGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCG ACCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATC AATCTATACGTCGAATACGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGAGTGAACAAT GAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGACTCGTGTTCTATCGTGA |
| Transcript | >Ani_SJS100_1|g6365.t1 ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCA ACCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGC CAAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGC AAGCTAGGAGGCGAGGACGACAACTTCGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCG ACCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATC AATCTATACGTCGAATACGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGAGTGAACAAT GAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGACTCGTGTTCTATCGTGA |
| Gene | >Ani_SJS100_1|g6365.t1 ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGGTACCTCCCTCGCATCCATCTCTCCCTAGCCATTTCAA TTGACGTTGCTAACCACGTCTCTCCCTTTCTTCTAGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAA CCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCC AAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCA AGCTAGGAGGCGAGGACGACAAGTAAGGACTCCACCCTACAGCGACGAGGCAACTCAACTGGGAGGACAGTCATT GACCGCTCCGCCACGTTTATAGCTTCGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGA CCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCA ATCTATACGTCGAATACGGTACGCTCTGGCTAGTTTAAACGATAACCTCCTCTACAGCTGTATGCTGACCACCTC TACTTCTAGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGAGTGAACAATGAGCTCTTTG AAGAGTCTCTGGAACAGTTTGTGGTATGTGCCATCAACGTCTCCTAGGCGGATGTAATCTAACCTACAGCAGACT CGTGTTCTATCGTGA |