Protein ID | Ani_SJS100_1|g6342.t1 |
Gene name | |
Location | scaffold_039:54147..56268 |
Strand | - |
Gene length (bp) | 2121 |
Transcript length (bp) | 1902 |
Coding sequence length (bp) | 1902 |
Protein length (aa) | 634 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13347 | MFS_2 | MFS/sugar transport protein | 6.1E-10 | 78 | 181 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 51 | 68 | 17 |
2 | 88 | 110 | 22 |
3 | 123 | 142 | 19 |
4 | 162 | 184 | 22 |
5 | 205 | 224 | 19 |
6 | 239 | 261 | 22 |
7 | 305 | 327 | 22 |
8 | 354 | 376 | 22 |
9 | 447 | 469 | 22 |
10 | 473 | 495 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6342.t1 MPETHERFADETSPLVGASDNNQVHSMSRNGDNNGTSGAGDAHHLSETKSSWYLFLLTLSIGGLQVVWSTELSNG SPYLLSLGMSKALLAFVWIAGPITGTLVQPYIGICSDNCRISWGKRKPFMVVGGIATVISLLALAWVREMTGGFL GLFGVDPASSATRTVVIVLATILMYCLDFSVNTVQAGIRCFIVDNAPSHQQEAANAWASRLTGVGNILGYIFGYM DLPKWFPFLGNTQFKVLCALASIALGITLLVSCLYIKERDPRLDGTPSSGNPGLVTFFKQVFKSIKHLPPEIAKV CEVQLAAWVGWFPFLFYSTTYIGQLFVNPIFDGHPGLSDDDINKAWEEATRIGTFALLVYAIISFVTNLTLPVLV VPTYKSAVPSEPTPTEGQSEDEPFLGNRRLSTSSIGTAMEAPAPILGINKGDSGEDKWLSKLQIPGFTLRRAWLM SHILFAVCMFSTFFIYSYQAATVVIGIVGISWALTLWAPFALISAEVSRIDTERRIRRHQNEGAVSAEQPRNDTS LPARASTDEHDLENGSPTSTAKAGEVEEEENLAQAGIILGLHNVAISAPQIISSLISSAIFKAFQKPRGEPWDDS VGWVMRFGGCAAVLAAVLTSRLTEGARGVPVSS* |
Coding | >Ani_SJS100_1|g6342.t1 ATGCCAGAAACGCATGAGCGGTTCGCTGATGAAACATCCCCTTTGGTGGGAGCATCTGACAATAATCAAGTGCAT TCGATGTCAAGAAATGGAGATAACAACGGGACCAGCGGGGCTGGAGATGCTCACCATCTGTCCGAGACGAAGAGC AGCTGGTACCTGTTTTTGTTGACTTTGAGCATTGGCGGTCTCCAGGTTGTGTGGTCCACTGAGCTGTCGAATGGA TCGCCCTACCTCCTGTCTCTTGGAATGAGCAAGGCTCTGCTTGCATTCGTTTGGATTGCTGGCCCTATAACAGGT ACCCTTGTGCAGCCGTATATCGGCATTTGCAGCGACAACTGCCGCATTTCATGGGGCAAGAGAAAGCCGTTCATG GTTGTGGGCGGCATTGCAACGGTCATTTCTCTCCTTGCCCTCGCTTGGGTCAGGGAGATGACCGGAGGCTTCCTT GGGCTTTTCGGTGTCGATCCAGCTTCTAGTGCAACGCGGACAGTGGTCATTGTACTGGCCACCATTTTGATGTAC TGCCTCGACTTTTCTGTAAATACTGTGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCGCACCAG CAGGAGGCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGGTAACATTCTCGGATATATTTTTGGATACATG GATCTACCGAAATGGTTCCCGTTCTTGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATCGCACTT GGGATAACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGATCCCCGTCTAGATGGAACGCCTTCATCGGGG AACCCTGGGCTTGTAACATTCTTCAAGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCCAAGGTG TGCGAAGTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCTCTTCTATTCCACGACATATATCGGGCAGCTC TTTGTGAATCCGATCTTCGATGGACACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAAGCTACG AGGATTGGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATTTGTGACTAATTTGACGTTGCCTGTACTTGTT GTTCCAACCTACAAGTCGGCTGTTCCTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCCTTCCTA GGCAATAGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGAGGCACCCGCGCCCATCTTGGGAATCAACAAG GGTGATTCAGGGGAAGATAAGTGGCTATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGGCTTATG TCGCATATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCATCTATTCTTACCAAGCCGCAACGGTGGTGATC GGGATCGTAGGGATTTCGTGGGCATTGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCCCGCATT GACACGGAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGTCTCCGCTGAGCAGCCTCGCAATGATACAAGT TTACCAGCTCGCGCCTCTACCGACGAGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCAGGGGAA GTGGAAGAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGGACTGCACAATGTGGCCATCTCAGCGCCACAA ATCATCTCGAGTCTAATTTCTAGTGCGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGATGATAGT GTCGGGTGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGCGGCTGTGCTGACCAGCAGGCTTACCGAGGGA GCACGGGGAGTGCCTGTTTCATCGTAG |
Transcript | >Ani_SJS100_1|g6342.t1 ATGCCAGAAACGCATGAGCGGTTCGCTGATGAAACATCCCCTTTGGTGGGAGCATCTGACAATAATCAAGTGCAT TCGATGTCAAGAAATGGAGATAACAACGGGACCAGCGGGGCTGGAGATGCTCACCATCTGTCCGAGACGAAGAGC AGCTGGTACCTGTTTTTGTTGACTTTGAGCATTGGCGGTCTCCAGGTTGTGTGGTCCACTGAGCTGTCGAATGGA TCGCCCTACCTCCTGTCTCTTGGAATGAGCAAGGCTCTGCTTGCATTCGTTTGGATTGCTGGCCCTATAACAGGT ACCCTTGTGCAGCCGTATATCGGCATTTGCAGCGACAACTGCCGCATTTCATGGGGCAAGAGAAAGCCGTTCATG GTTGTGGGCGGCATTGCAACGGTCATTTCTCTCCTTGCCCTCGCTTGGGTCAGGGAGATGACCGGAGGCTTCCTT GGGCTTTTCGGTGTCGATCCAGCTTCTAGTGCAACGCGGACAGTGGTCATTGTACTGGCCACCATTTTGATGTAC TGCCTCGACTTTTCTGTAAATACTGTGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCGCACCAG CAGGAGGCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGGTAACATTCTCGGATATATTTTTGGATACATG GATCTACCGAAATGGTTCCCGTTCTTGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATCGCACTT GGGATAACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGATCCCCGTCTAGATGGAACGCCTTCATCGGGG AACCCTGGGCTTGTAACATTCTTCAAGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCCAAGGTG TGCGAAGTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCTCTTCTATTCCACGACATATATCGGGCAGCTC TTTGTGAATCCGATCTTCGATGGACACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAAGCTACG AGGATTGGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATTTGTGACTAATTTGACGTTGCCTGTACTTGTT GTTCCAACCTACAAGTCGGCTGTTCCTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCCTTCCTA GGCAATAGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGAGGCACCCGCGCCCATCTTGGGAATCAACAAG GGTGATTCAGGGGAAGATAAGTGGCTATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGGCTTATG TCGCATATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCATCTATTCTTACCAAGCCGCAACGGTGGTGATC GGGATCGTAGGGATTTCGTGGGCATTGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCCCGCATT GACACGGAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGTCTCCGCTGAGCAGCCTCGCAATGATACAAGT TTACCAGCTCGCGCCTCTACCGACGAGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCAGGGGAA GTGGAAGAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGGACTGCACAATGTGGCCATCTCAGCGCCACAA ATCATCTCGAGTCTAATTTCTAGTGCGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGATGATAGT GTCGGGTGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGCGGCTGTGCTGACCAGCAGGCTTACCGAGGGA GCACGGGGAGTGCCTGTTTCATCGTAG |
Gene | >Ani_SJS100_1|g6342.t1 ATGCCAGAAACGCATGAGCGGTTCGCTGATGAAACATCCCCTTTGGTGGGAGCATCTGACAATAATCAAGTGCAT TCGATGTCAAGAAATGGAGATAACAACGGGACCAGCGGGGCTGGAGATGCTCACCATCTGTCCGAGACGAAGAGC AGCTGGTACCTGTTTTTGTTGACTTTGAGCATTGGCGGGTAGGTAACAAGTCTGTCCCGTTGGCGATGTAATCTA GGGCTGTTTCTGTGTGTTGTATAGCTTTTGCCCGAAGCTAACGAGGTTTGTTGTTCTAGTCTCCAGGTTGTGTGG TCCACTGAGCTGTCGAATGGATCGGTAAGCTACCACTGTTTATCGGACCCTACATGGGAATAGGGGCTAATTCTG TTGTATGAGCATAGCCCTACCTCCTGTCTCTTGGAATGAGCAAGGCTCTGCTTGCATTCGTTTGGATTGCTGGCC CTATAACAGGTACCCTTGTGCAGCCGTATATCGGCATTTGCAGCGACAACTGCCGCATTTCATGGGGCAAGAGAA AGCCGTTCATGGTTGTGGGCGGCATTGCAACGGTCATTTCTCTCCTTGCCCTCGCTTGGGTCAGGGAGATGACCG GAGGCTTCCTTGGGCTTTTCGGTGTCGATCCAGCTTCTAGTGCAACGCGGACAGTGGTCATTGTACTGGCCACCA TTTTGATGTACTGCCTCGACTTTTCTGTAAATACTGGTAGGTCCCCTCTTGCTGCACTGATATGTGCAAACCTAA AGTGACTGTTCGGCTGTAGTGCAGGCAGGCATCCGGTGTTTCATTGTGGACAATGCCCCTTCGCACCAGCAGGAG GCGGCAAATGCATGGGCTAGCCGGCTCACCGGTGTTGGTAACATTCTCGGATATATTTTTGGATACATGGATCTA CCGAAATGGTTCCCGTTCTTGGGAAACACGCAGTTCAAAGTCCTATGTGCATTGGCGTCCATCGCACTTGGGATA ACGTTGTTGGTTAGCTGCCTATACATCAAGGAACGTGATCCCCGTCTAGATGGAACGCCTTCATCGGGGAACCCT GGGCTTGTAACATTCTTCAAGCAGGTTTTCAAGTCGATCAAGCATCTACCGCCAGAGATTGCCAAGGTGTGCGAA GTTCAACTTGCCGCGTGGGTGGGTTGGTTCCCTTTCCTCTTCTATTCCACGACATATATCGGGCAGCTCTTTGTG AATCCGATCTTCGATGGACACCCCGGTCTCTCGGATGATGATATCAACAAAGCTTGGGAGGAAGCTACGAGGATT GGGACATTCGCGCTGCTGGTCTACGCAATCATCTCATTTGTGACTAATTTGACGTTGCCTGTACTTGTTGTTCCA ACCTACAAGTCGGCTGTTCCTTCTGAGCCTACGCCTACGGAAGGTCAGTCAGAGGATGAGCCCTTCCTAGGCAAT AGAAGGCTGTCGACATCCTCGATTGGCACTGCAATGGAGGCACCCGCGCCCATCTTGGGAATCAACAAGGGTGAT TCAGGGGAAGATAAGTGGCTATCGAAGTTGCAGATCCCCGGATTCACCCTTCGGCGTGCGTGGCTTATGTCGCAT ATCCTGTTCGCTGTCTGTATGTTCAGCACCTTCTTCATCTATTCTTACCAAGCCGCAACGGTGGTGATCGGGATC GTAGGGATTTCGTGGGCATTGACGCTTTGGGCACCCTTTGCCCTAATCTCTGCGGAGGTCTCCCGCATTGACACG GAGCGTCGAATCCGGCGACATCAAAATGAGGGCGCAGTCTCCGCTGAGCAGCCTCGCAATGATACAAGTTTACCA GCTCGCGCCTCTACCGACGAGCATGACCTGGAGAATGGATCACCCACTTCAACTGCCAAGGCAGGGGAAGTGGAA GAGGAGGAAAATCTGGCACAGGCAGGGATCATCCTCGGACTGCACAATGTGGCCATCTCAGCGCCACAAATCATC TCGAGTCTAATTTCTAGTGCGATTTTCAAGGCGTTCCAGAAGCCTCGGGGTGAGCCGTGGGATGATAGTGTCGGG TGGGTGATGAGGTTCGGGGGCTGCGCGGCAGTATTGGCGGCTGTGCTGACCAGCAGGCTTACCGAGGGAGCACGG GGAGTGCCTGTTTCATCGTAG |