© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6340.t1 |
| Gene name | |
| Location | scaffold_039:48166..50163 |
| Strand | - |
| Gene length (bp) | 1997 |
| Transcript length (bp) | 1494 |
| Coding sequence length (bp) | 1494 |
| Protein length (aa) | 498 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.0E-56 | 41 | 457 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 41 | 63 | 22 |
| 2 | 73 | 95 | 22 |
| 3 | 116 | 138 | 22 |
| 4 | 148 | 170 | 22 |
| 5 | 177 | 199 | 22 |
| 6 | 219 | 241 | 22 |
| 7 | 262 | 284 | 22 |
| 8 | 313 | 332 | 19 |
| 9 | 353 | 375 | 22 |
| 10 | 380 | 402 | 22 |
| 11 | 415 | 437 | 22 |
| 12 | 452 | 471 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6340.t1 MAEKFKDAAQVADGDPPIEQGDSQLLATLGYKQELRRHYSTVQVFAIAFSIMGLLPSIATTLSYSIPAGPVGMVW ADLASAMPTAGGLYFWTHYFSGEKWKNPLSFVVGYSNSLGLIGGVCSIDYGFATILLSVVSIARDGNWTASRPVL YGTYVACVVVHGLIAIFCARIMPKIQSACIVSNVGLVLATVLALPIGKAVRGGQINSGTYVFGHSENLTTWPQGW TFMLSWMSPIWTIGAFDSCVHMSEEASHAARAVPLGIIWSAGLCGLLGFVSLALIAAVINPDLNAVLNSSFGQPM AQIYYDALGKSGALGFMIVVAIVQFFMGLSLVQPLPFSNFFRHVSKRVRYQPVRMVCFVVLISVILGLLCLIDEA ASSALFSLAVAGNDLAWMVPILSRLVWGKERFHPGEFYTGWFSKPIAITAVVYLAYVIVLSMFPTGGPSPSPQDM NYTIVINGSLWLGAMVYYVVYARKVYRGPQMTVGGGGESSGLEEDEK* |
| Coding | >Ani_SJS100_1|g6340.t1 ATGGCGGAAAAGTTCAAGGATGCTGCTCAGGTAGCTGATGGGGATCCTCCCATTGAGCAGGGCGATTCGCAGCTT TTAGCTACGCTGGGGTATAAGCAGGAACTGCGTCGTCATTATTCCACCGTCCAGGTCTTCGCTATCGCCTTTAGT ATTATGGGATTATTGCCCTCGATTGCGACGACGCTCTCGTACTCGATTCCTGCTGGTCCCGTAGGCATGGTTTGG GCCGACCTAGCATCCGCCATGCCTACTGCCGGTGGTCTCTACTTCTGGACTCACTACTTCAGCGGCGAGAAGTGG AAGAACCCTCTCAGCTTCGTAGTCGGGTACAGCAATAGTCTAGGACTCATCGGCGGCGTCTGCTCCATCGATTAT GGCTTCGCTACAATACTCCTCTCAGTCGTATCAATCGCGCGCGATGGAAACTGGACAGCCTCTCGACCCGTCCTA TACGGCACCTACGTCGCCTGCGTGGTCGTCCACGGCCTTATCGCCATCTTCTGCGCGCGCATCATGCCCAAGATC CAGTCCGCCTGTATCGTGAGCAACGTCGGCCTTGTCCTCGCCACAGTCCTCGCTCTGCCCATCGGTAAAGCCGTC CGCGGGGGACAGATCAACTCGGGAACGTATGTCTTTGGACACTCTGAGAACCTCACGACCTGGCCCCAGGGCTGG ACCTTCATGCTGTCATGGATGTCGCCCATCTGGACCATCGGCGCATTCGACTCCTGCGTCCACATGAGCGAGGAA GCTAGTCACGCGGCGCGTGCCGTGCCATTAGGTATCATTTGGTCTGCGGGACTCTGCGGACTGTTAGGGTTTGTA TCCCTCGCGCTCATCGCTGCCGTGATCAACCCGGACCTTAATGCCGTGCTGAACTCGAGTTTCGGACAGCCAATG GCACAGATCTACTACGACGCCCTCGGCAAAAGCGGTGCCCTCGGCTTCATGATCGTCGTCGCAATTGTCCAATTC TTTATGGGCTTGAGTCTGGTACAGCCCCTCCCCTTCTCGAACTTCTTCCGGCACGTGAGCAAGCGCGTCCGCTAC CAACCCGTGCGAATGGTCTGCTTTGTCGTCCTGATCTCCGTCATCCTGGGCCTCCTGTGCCTCATCGACGAAGCC GCCTCTAGCGCCCTCTTCTCCCTCGCCGTCGCGGGCAACGATCTCGCCTGGATGGTGCCCATCCTGAGTCGTCTC GTCTGGGGTAAGGAGCGCTTTCACCCTGGAGAGTTCTATACGGGTTGGTTTAGTAAACCCATTGCCATTACGGCG GTCGTGTATTTGGCGTATGTTATTGTCTTGAGTATGTTTCCGACGGGGGGGCCGAGTCCGTCGCCGCAGGATATG AACTATACGATTGTGATTAATGGGAGTTTGTGGCTGGGAGCGATGGTTTATTATGTCGTTTATGCGAGGAAGGTG TATAGGGGGCCGCAGATGACGGTGGGTGGTGGGGGGGAGTCGTCCGGGTTGGAGGAGGATGAGAAGTGA |
| Transcript | >Ani_SJS100_1|g6340.t1 ATGGCGGAAAAGTTCAAGGATGCTGCTCAGGTAGCTGATGGGGATCCTCCCATTGAGCAGGGCGATTCGCAGCTT TTAGCTACGCTGGGGTATAAGCAGGAACTGCGTCGTCATTATTCCACCGTCCAGGTCTTCGCTATCGCCTTTAGT ATTATGGGATTATTGCCCTCGATTGCGACGACGCTCTCGTACTCGATTCCTGCTGGTCCCGTAGGCATGGTTTGG GCCGACCTAGCATCCGCCATGCCTACTGCCGGTGGTCTCTACTTCTGGACTCACTACTTCAGCGGCGAGAAGTGG AAGAACCCTCTCAGCTTCGTAGTCGGGTACAGCAATAGTCTAGGACTCATCGGCGGCGTCTGCTCCATCGATTAT GGCTTCGCTACAATACTCCTCTCAGTCGTATCAATCGCGCGCGATGGAAACTGGACAGCCTCTCGACCCGTCCTA TACGGCACCTACGTCGCCTGCGTGGTCGTCCACGGCCTTATCGCCATCTTCTGCGCGCGCATCATGCCCAAGATC CAGTCCGCCTGTATCGTGAGCAACGTCGGCCTTGTCCTCGCCACAGTCCTCGCTCTGCCCATCGGTAAAGCCGTC CGCGGGGGACAGATCAACTCGGGAACGTATGTCTTTGGACACTCTGAGAACCTCACGACCTGGCCCCAGGGCTGG ACCTTCATGCTGTCATGGATGTCGCCCATCTGGACCATCGGCGCATTCGACTCCTGCGTCCACATGAGCGAGGAA GCTAGTCACGCGGCGCGTGCCGTGCCATTAGGTATCATTTGGTCTGCGGGACTCTGCGGACTGTTAGGGTTTGTA TCCCTCGCGCTCATCGCTGCCGTGATCAACCCGGACCTTAATGCCGTGCTGAACTCGAGTTTCGGACAGCCAATG GCACAGATCTACTACGACGCCCTCGGCAAAAGCGGTGCCCTCGGCTTCATGATCGTCGTCGCAATTGTCCAATTC TTTATGGGCTTGAGTCTGGTACAGCCCCTCCCCTTCTCGAACTTCTTCCGGCACGTGAGCAAGCGCGTCCGCTAC CAACCCGTGCGAATGGTCTGCTTTGTCGTCCTGATCTCCGTCATCCTGGGCCTCCTGTGCCTCATCGACGAAGCC GCCTCTAGCGCCCTCTTCTCCCTCGCCGTCGCGGGCAACGATCTCGCCTGGATGGTGCCCATCCTGAGTCGTCTC GTCTGGGGTAAGGAGCGCTTTCACCCTGGAGAGTTCTATACGGGTTGGTTTAGTAAACCCATTGCCATTACGGCG GTCGTGTATTTGGCGTATGTTATTGTCTTGAGTATGTTTCCGACGGGGGGGCCGAGTCCGTCGCCGCAGGATATG AACTATACGATTGTGATTAATGGGAGTTTGTGGCTGGGAGCGATGGTTTATTATGTCGTTTATGCGAGGAAGGTG TATAGGGGGCCGCAGATGACGGTGGGTGGTGGGGGGGAGTCGTCCGGGTTGGAGGAGGATGAGAAGTGA |
| Gene | >Ani_SJS100_1|g6340.t1 ATGGCGGAAAAGTTCAAGGATGCTGCTCAGGTAGCTGATGGGGATCCTCCCATTGAGCAGGGCGATTCGCAGCTT TTAGGTATGTCATGCTATCAATTTATACTTTTATCGAGTTGTTGATTATGGTGAGATTGTTTGTGCTGATCTGAT CGGATAAGCTACGCTGGGGTATAAGCAGGAACTGCGTCGTCATTATTCCACCGTCCAGGTCTTCGCTATCGCCTT TAGTATTATGGGATTATTGCCCTCGATTGCGACGACGCTCTCGTACTCGATTCCTGCTGGTCCCGTAGGCATGGT TTGGGTATGGTTGCATATGCATGCTGGCTCTACATACATGGGATTCGTGGCTAACTTGAGTTCAGGGTGAGGCTT TTCGCTAGTATGGTCTAGGCATTGATTCTGATGGGTCTTGCAGGATGGTTTTCTGCGAGTGTGTTTATCTTCATA GTGGCTTTGGCGATGGTCTGCTTCATGCGCAATATACCTCATGCTCATCGAATTGTTTGGATGCTTACTACCCAC TGGATATAGGCCGACCTAGCATCCGCCATGCCTACTGCCGGTGGTCTCTACTTCTGGACTCACTACTTCAGCGGC GAGAAGTGGAAGAACCCTCTCAGCTTCGTAGTCGGGTACAGCAATAGTCTAGGACTCATCGGCGGCGTCTGCTCC ATCGATTGTATGCGAATCCCTCGAACCTTTCGTGTCCTCCTATCGCTAACCCTAGCCGACAAGATGGCTTCGCTA CAATACTCCTCTCAGTCGTATCAATCGCGCGCGATGGAAACTGGACAGCCTCTCGACCCGTCCTATACGGCACCT ACGTCGCCTGCGTGGTCGTCCACGGCCTTATCGCCATCTTCTGCGCGCGCATCATGCCCAAGATCCAGTCCGCCT GTATCGTGAGCAACGTCGGCCTTGTCCTCGCCACAGTCCTCGCTCTGCCCATCGGTAAAGCCGTCCGCGGGGGAC AGATCAACTCGGGAACGTATGTCTTTGGACACTCTGAGAACCTCACGACCTGGCCCCAGGGCTGGACCTTCATGC TGTCATGGATGTCGCCCATCTGGACCATCGGCGCATTCGACTCCTGCGTCCACATGAGCGAGGAAGCTAGTCACG CGGCGCGTGCCGTGCCATTAGGTATCATTTGGTCTGCGGGACTCTGCGGACTGTTAGGGTTTGTATCCCTCGCGC TCATCGCTGCCGTGATCAACCCGGACCTTAATGCCGTGCTGAACTCGAGTTTCGGACAGCCAATGGCACAGGTAC TCACCTACTCTCCATTCCCTCTATCCTAGAATGGTAATAACCGCAGGCACAGATCTACTACGACGCCCTCGGCAA AAGCGGTGCCCTCGGCTTCATGATCGTCGTCGCAATTGTCCAATTCTTTATGGGCTTGAGTCTGGTACAGCCCCT CCCCTTCTCGAACTTCTTCCGGCACGTGAGCAAGCGCGTCCGCTACCAACCCGTGCGAATGGTCTGCTTTGTCGT CCTGATCTCCGTCATCCTGGGCCTCCTGTGCCTCATCGACGAAGCCGCCTCTAGCGCCCTCTTCTCCCTCGCCGT CGCGGGCAACGATCTCGCCTGGATGGTGCCCATCCTGAGTCGTCTCGTCTGGGGTAAGGAGCGCTTTCACCCTGG AGAGTTCTATACGGGTTGGTTTAGTAAACCCATTGCCATTACGGCGGTCGTGTATTTGGCGTATGTTATTGTCTT GAGTATGTTTCCGACGGGGGGGCCGAGTCCGTCGCGTAAGTTGTTCCCTTTTTTTTCTTTTCTCTTTGAATATAC TTCGTTTGAGGGTTGGAGTGGTTGAGCTAATGATGTGTGTAGCGCAGGATATGAACTATACGATTGTGATTAATG GGAGTTTGTGGCTGGGAGCGATGGTTTATTATGTCGTTTATGCGAGGAAGGTGTATAGGGGGCCGCAGATGACGG TGGGTGGTGGGGGGGAGTCGTCCGGGTTGGAGGAGGATGAGAAGTGA |