Protein ID | Ani_SJS100_1|g6314.t1 |
Gene name | |
Location | scaffold_038:256776..258202 |
Strand | + |
Gene length (bp) | 1426 |
Transcript length (bp) | 1338 |
Coding sequence length (bp) | 1338 |
Protein length (aa) | 446 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10516 | SHNi-TPR | SHNi-TPR | 9.3E-17 | 215 | 252 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 60 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6314.t1 MEPSTSLNDDSTKTQPSLDDLIKQAAAKDAIKDYNAAAELYSEATELQAELNGELALENADLLFAYGKALYNVAV SKSDVLGSKVAGESQPSSTSIERPSAAATATTAGIVEKAVAQSPPERSSGAQKTNTGDVPAKPYFQFTGDENFDD SDSEDEADGEEAAADDEDDFANAFEVLDLARVLYHKKMTTIEEGIGKGKSAGLPPDLKHVKERLADTYDLQAEIS LEAERFKDAVTDLRTSLELRQSLFPMEDPSVAECHYKLSLALEFGSVKNENDNSQEDTSPKEPVDEEMRKEAAAQ MEKAIESCRLRMDQEQKKLVDDSSLDEDRVTAMKRRIANVKDIIADMEQRLVDLRHPPVSAIENSDADNTVLKGI LGQIMGHSPSEQKAHLDAVTREANDLSAFIKRKPASNKPPQKSDTVAKRSAPEDGAGGDTKRARAGDELE* |
Coding | >Ani_SJS100_1|g6314.t1 ATGGAACCAAGTACATCCCTGAATGACGATAGTACGAAGACTCAACCATCCTTGGACGACCTTATCAAGCAAGCT GCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTGCAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAG CTTAACGGAGAATTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTACAACGTTGCCGTC AGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAGAATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCC GCTGCGGCAACAGCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGAGAGATCCTCAGGA GCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGCCGTACTTCCAATTTACTGGTGACGAAAACTTTGACGAC TCGGATTCGGAAGACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGCCAATGCCTTTGAA GTTCTTGACTTGGCACGTGTACTATACCACAAAAAGATGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCC GCAGGTTTACCTCCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATACCTACGATTTACAAGCCGAGATCTCA CTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACTTGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCG ATGGAGGATCCTTCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTCCGTCAAGAATGAG AATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGCCGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAA ATGGAAAAGGCTATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGACGATAGTTCGTTG GATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAGCAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGG CTCGTCGATCTTCGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGTGCTGAAGGGTATT TTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAAAGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGAC CTTTCTGCGTTCATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGTAGCAAAACGATCG GCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAGCACGAGCAGGCGATGAACTTGAATGA |
Transcript | >Ani_SJS100_1|g6314.t1 ATGGAACCAAGTACATCCCTGAATGACGATAGTACGAAGACTCAACCATCCTTGGACGACCTTATCAAGCAAGCT GCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTGCAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAG CTTAACGGAGAATTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTACAACGTTGCCGTC AGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAGAATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCC GCTGCGGCAACAGCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGAGAGATCCTCAGGA GCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGCCGTACTTCCAATTTACTGGTGACGAAAACTTTGACGAC TCGGATTCGGAAGACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGCCAATGCCTTTGAA GTTCTTGACTTGGCACGTGTACTATACCACAAAAAGATGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCC GCAGGTTTACCTCCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATACCTACGATTTACAAGCCGAGATCTCA CTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACTTGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCG ATGGAGGATCCTTCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTCCGTCAAGAATGAG AATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGCCGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAA ATGGAAAAGGCTATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGACGATAGTTCGTTG GATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAGCAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGG CTCGTCGATCTTCGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGTGCTGAAGGGTATT TTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAAAGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGAC CTTTCTGCGTTCATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGTAGCAAAACGATCG GCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAGCACGAGCAGGCGATGAACTTGAATGA |
Gene | >Ani_SJS100_1|g6314.t1 ATGGAACCAAGTACATCCCTGAATGACGATAGTACGAAGACTCAACCATCCTTGGACGACCTTATCAAGCAAGCT GCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTGCAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAG CTTAACGGAGAATTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTACAACGTTGCCGTC AGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAGAATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCC GCTGCGGCAACAGCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGAGAGATCCTCAGGA GCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGCCGTACTTCCAATTTACTGGTGACGAAAACTTTGACGAC TCGGATTCGGAAGACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGCCAATGCCTTTGAA GTTCTTGACTTGGCACGTGTACTATACCACAAAAAGATGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCC GCAGGTTTACCTCCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATACCTACGATTTACAAGCCGAGATCTCA CTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACTTGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCG ATGGAGGATCCTTCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTCCGTCAAGAATGAG AATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGCCGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAA ATGGAAAAGGCTATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGACGATAGTTCGTTG GATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAGCAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGG GTAAGCAACGACCTTCTTTCCAAATCTCTTTAACGCGATCCCTTCCTACTATGTTTGCTTCGGCTACAGTTACTG AGAACGTTGACAGCTCGTCGATCTTCGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGT GCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAAAGGCTCATCTCGATGCTGTCACGAG AGAAGCAAATGACCTTTCTGCGTTCATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGT AGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAGCACGAGCAGGCGATGAACTTGAATG A |