Protein ID | Ani_SJS100_1|g6295.t1 |
Gene name | |
Location | scaffold_038:210057..213066 |
Strand | - |
Gene length (bp) | 3009 |
Transcript length (bp) | 2820 |
Coding sequence length (bp) | 2820 |
Protein length (aa) | 940 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06424 | PRP1_N | PRP1 splicing factor, N-terminal | 5.5E-52 | 13 | 177 |
PF13428 | TPR_14 | Tetratricopeptide repeat | 2.1E-05 | 609 | 650 |
PF14559 | TPR_19 | Tetratricopeptide repeat | 2.2E-06 | 621 | 675 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 1.2E-02 | 612 | 672 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 3.5E-03 | 686 | 732 |
GO Term | Description | Terminal node |
---|---|---|
GO:0000398 | mRNA splicing, via spliceosome | Yes |
GO:0090304 | nucleic acid metabolic process | No |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | No |
GO:0016071 | mRNA metabolic process | No |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0016070 | RNA metabolic process | No |
GO:0000375 | RNA splicing, via transesterification reactions | No |
GO:0071704 | organic substance metabolic process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0008380 | RNA splicing | No |
GO:0044238 | primary metabolic process | No |
GO:0006396 | RNA processing | No |
GO:0009987 | cellular process | No |
GO:0008152 | metabolic process | No |
GO:0006397 | mRNA processing | No |
GO:0044237 | cellular metabolic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0006725 | cellular aromatic compound metabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0008150 | biological_process | No |
GO:0046483 | heterocycle metabolic process | No |
GO:0006139 | nucleobase-containing compound metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6295.t1 MASGRKDFLSQAAPENYVAGLGRGATGFTTRSDLGPAREGPTPEQIQAALAKRAQLLGAAPPTAYGAGREKGGKD EKADEEEDDERFQDPDNEVGLFAYGQFDQEDDEADRIYREVDEKMDKRRKMRREAREQQEREDYERKNPKIQQQF ADLKRSLASVSEDEWANLPEVGDLTGKNRRAKQNLRQRFYAVPDSVIASARDSTQFETTIAEDGTQTAANGAEAA DGTITNFADISAARDKVLKVRLDQAAMGSSGDSASGSATNIDPKGYLTSLTQSELKAGEVEIGDIKRVRVLLESV TKTNPKHAPGWIALARLEELAGKIVTARNVIAKGCELCPKSEDAWLENIRLNEGHNAKVIAANAIKNNDRSTRLW IEAMRLETEPRAKKNVLRQAILHIPQSVTIWKEAVNLEDDPADARLLLAKAVEMIPLSVELWLALARLESPENAQ KVLNAARKAVPTSHEVWVAAARLQEQMGTFEKVNVMKRAVQALARENAMLKREEWVAEAEKCEEEGAILTCGAII RETLGWGLDEDDDRKDIWMDDAKASIARGKYETARAIYAYALRVFVNRRSIWIAAAELERNHGSKEALWQVLEKA VEACPQSEELWLQLAKEKWQSGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADANQTSEARELLATARREAGTD RVWIKSVAFERQLGNIDEALDLVNQGLQIYPKADKLWMMKGQIYEAQNKYPQAREAYGTGTRACNKSIPLWLLAS RLEEKAGAVVKARSVLDRARLAVPKSPELWTESVRVERRANNIAQAKVLMAKALQEVPTSGLLWSESIWHLEPRA QRKARSLEAIKKADNDPILFITVARIFWGERRLEKALTWFEKAIVSDSDMGDAWAWYYKFLLQHGTEEKRADVIS KCISTEPKHGEIWQSVAKDPANALKSTEEILKMVADRLT* |
Coding | >Ani_SJS100_1|g6295.t1 ATGGCGTCTGGGCGTAAGGACTTTTTGAGCCAAGCGGCTCCCGAGAACTATGTTGCCGGTCTTGGTCGCGGTGCC ACTGGCTTCACCACCCGTTCAGATCTCGGACCCGCGCGAGAAGGCCCCACGCCAGAACAGATCCAGGCAGCACTG GCGAAGCGAGCCCAGCTGCTTGGAGCTGCTCCTCCCACAGCTTATGGCGCAGGGCGAGAGAAGGGTGGTAAAGAT GAGAAGGCGGATGAAGAGGAAGATGACGAGCGATTTCAAGACCCGGACAATGAAGTCGGGCTATTCGCATATGGT CAGTTCGACCAAGAGGATGATGAGGCGGACCGCATCTACAGAGAGGTGGATGAAAAGATGGACAAGCGCCGGAAG ATGAGAAGGGAAGCTCGCGAACAGCAAGAACGAGAAGACTACGAACGCAAGAACCCTAAGATTCAGCAGCAATTT GCAGATCTAAAACGATCCTTAGCCTCTGTCTCCGAGGACGAGTGGGCAAACCTCCCGGAGGTGGGAGATCTCACC GGAAAGAACCGACGCGCAAAGCAGAACCTTCGGCAGAGATTCTACGCAGTACCGGACAGTGTGATCGCGAGCGCA AGAGACTCGACCCAGTTTGAGACAACGATTGCAGAGGACGGGACCCAGACCGCAGCCAATGGAGCGGAGGCAGCT GATGGGACAATCACCAATTTTGCAGACATCAGTGCTGCGCGTGATAAAGTCTTGAAAGTTAGGCTCGACCAAGCG GCGATGGGATCATCTGGGGATTCTGCGTCTGGAAGCGCTACCAACATCGATCCAAAGGGCTACCTTACAAGTCTC ACGCAGTCTGAGCTGAAAGCTGGAGAAGTAGAAATTGGAGACATTAAGCGGGTCCGCGTTTTGTTGGAATCTGTA ACGAAAACGAATCCCAAGCATGCGCCGGGATGGATTGCGCTGGCGCGTCTAGAAGAATTAGCCGGTAAAATCGTG ACTGCCAGGAATGTAATCGCCAAGGGTTGCGAGTTGTGCCCGAAAAGTGAAGATGCCTGGCTTGAAAACATTCGC CTTAACGAGGGCCATAATGCCAAGGTGATTGCGGCTAATGCCATCAAGAACAATGACCGTTCTACAAGACTATGG ATCGAAGCCATGCGATTGGAGACAGAGCCTCGTGCGAAGAAGAACGTTCTTAGACAGGCGATCCTTCACATACCT CAGTCTGTTACGATCTGGAAAGAAGCCGTCAACCTGGAGGACGACCCTGCCGATGCACGTCTGCTTCTGGCGAAG GCAGTTGAGATGATCCCCCTTTCCGTTGAGCTCTGGCTGGCTCTGGCTCGCCTAGAATCACCGGAGAATGCACAG AAGGTTCTCAATGCCGCCCGCAAAGCGGTTCCCACAAGCCACGAAGTCTGGGTCGCTGCTGCCCGCCTGCAGGAG CAGATGGGTACGTTCGAGAAGGTGAATGTGATGAAGAGAGCTGTCCAAGCCCTCGCGAGAGAAAACGCCATGCTC AAACGGGAGGAGTGGGTAGCGGAGGCTGAGAAGTGCGAAGAGGAAGGTGCTATTCTCACCTGTGGCGCCATCATT CGTGAGACTCTCGGATGGGGCTTGGATGAGGATGACGATCGCAAGGACATCTGGATGGATGACGCAAAGGCTAGT ATTGCCAGGGGGAAGTACGAAACTGCCAGGGCTATCTATGCCTACGCGCTGCGTGTTTTCGTCAACCGTCGTTCA ATCTGGATTGCGGCAGCCGAGTTGGAGCGCAACCACGGTAGTAAAGAAGCGCTGTGGCAAGTCCTTGAAAAGGCC GTTGAGGCGTGCCCGCAAAGTGAGGAACTATGGCTGCAGCTTGCGAAAGAAAAGTGGCAGTCCGGCGAGATCGAC GATGCCCGGAGAGTGCTCGGCCGTGCCTTCAACCAGAACCCCAACAACGAGGATATCTGGCTGGCTGCTGTCAAG CTAGAGGCCGATGCCAACCAAACATCCGAAGCCAGAGAACTTCTTGCAACTGCTCGACGCGAAGCGGGTACGGAC CGCGTTTGGATAAAGAGCGTCGCGTTCGAGCGACAGCTCGGCAACATCGACGAGGCGCTCGATCTGGTGAACCAA GGACTTCAAATCTATCCCAAGGCGGACAAACTCTGGATGATGAAGGGACAGATCTACGAAGCCCAAAACAAATAC CCACAGGCTCGGGAAGCTTACGGGACCGGAACCAGAGCCTGCAACAAGTCCATCCCACTCTGGCTGTTGGCCTCA AGACTTGAAGAAAAGGCCGGTGCGGTCGTAAAGGCTCGTTCAGTGCTCGACCGTGCCCGCCTTGCGGTCCCCAAG AGTCCAGAGCTCTGGACCGAAAGTGTGCGCGTAGAGCGGCGAGCAAACAACATTGCCCAAGCCAAGGTCCTAATG GCCAAGGCACTGCAAGAAGTCCCTACCTCCGGATTACTATGGAGCGAAAGCATTTGGCACCTGGAGCCGCGCGCG CAACGGAAAGCTCGGAGTCTGGAAGCGATCAAGAAGGCTGATAACGATCCGATTCTCTTTATTACCGTGGCGCGG ATTTTCTGGGGCGAGCGCCGATTGGAAAAAGCACTCACCTGGTTCGAGAAAGCCATTGTCTCGGATAGTGATATG GGCGACGCATGGGCTTGGTACTACAAATTCTTGTTGCAGCATGGCACAGAGGAAAAACGCGCCGATGTAATATCC AAGTGTATTTCGACCGAGCCCAAGCACGGAGAAATCTGGCAATCCGTGGCCAAAGACCCCGCCAACGCGCTCAAG TCGACAGAAGAGATTTTGAAGATGGTTGCAGACCGTCTGACCTAA |
Transcript | >Ani_SJS100_1|g6295.t1 ATGGCGTCTGGGCGTAAGGACTTTTTGAGCCAAGCGGCTCCCGAGAACTATGTTGCCGGTCTTGGTCGCGGTGCC ACTGGCTTCACCACCCGTTCAGATCTCGGACCCGCGCGAGAAGGCCCCACGCCAGAACAGATCCAGGCAGCACTG GCGAAGCGAGCCCAGCTGCTTGGAGCTGCTCCTCCCACAGCTTATGGCGCAGGGCGAGAGAAGGGTGGTAAAGAT GAGAAGGCGGATGAAGAGGAAGATGACGAGCGATTTCAAGACCCGGACAATGAAGTCGGGCTATTCGCATATGGT CAGTTCGACCAAGAGGATGATGAGGCGGACCGCATCTACAGAGAGGTGGATGAAAAGATGGACAAGCGCCGGAAG ATGAGAAGGGAAGCTCGCGAACAGCAAGAACGAGAAGACTACGAACGCAAGAACCCTAAGATTCAGCAGCAATTT GCAGATCTAAAACGATCCTTAGCCTCTGTCTCCGAGGACGAGTGGGCAAACCTCCCGGAGGTGGGAGATCTCACC GGAAAGAACCGACGCGCAAAGCAGAACCTTCGGCAGAGATTCTACGCAGTACCGGACAGTGTGATCGCGAGCGCA AGAGACTCGACCCAGTTTGAGACAACGATTGCAGAGGACGGGACCCAGACCGCAGCCAATGGAGCGGAGGCAGCT GATGGGACAATCACCAATTTTGCAGACATCAGTGCTGCGCGTGATAAAGTCTTGAAAGTTAGGCTCGACCAAGCG GCGATGGGATCATCTGGGGATTCTGCGTCTGGAAGCGCTACCAACATCGATCCAAAGGGCTACCTTACAAGTCTC ACGCAGTCTGAGCTGAAAGCTGGAGAAGTAGAAATTGGAGACATTAAGCGGGTCCGCGTTTTGTTGGAATCTGTA ACGAAAACGAATCCCAAGCATGCGCCGGGATGGATTGCGCTGGCGCGTCTAGAAGAATTAGCCGGTAAAATCGTG ACTGCCAGGAATGTAATCGCCAAGGGTTGCGAGTTGTGCCCGAAAAGTGAAGATGCCTGGCTTGAAAACATTCGC CTTAACGAGGGCCATAATGCCAAGGTGATTGCGGCTAATGCCATCAAGAACAATGACCGTTCTACAAGACTATGG ATCGAAGCCATGCGATTGGAGACAGAGCCTCGTGCGAAGAAGAACGTTCTTAGACAGGCGATCCTTCACATACCT CAGTCTGTTACGATCTGGAAAGAAGCCGTCAACCTGGAGGACGACCCTGCCGATGCACGTCTGCTTCTGGCGAAG GCAGTTGAGATGATCCCCCTTTCCGTTGAGCTCTGGCTGGCTCTGGCTCGCCTAGAATCACCGGAGAATGCACAG AAGGTTCTCAATGCCGCCCGCAAAGCGGTTCCCACAAGCCACGAAGTCTGGGTCGCTGCTGCCCGCCTGCAGGAG CAGATGGGTACGTTCGAGAAGGTGAATGTGATGAAGAGAGCTGTCCAAGCCCTCGCGAGAGAAAACGCCATGCTC AAACGGGAGGAGTGGGTAGCGGAGGCTGAGAAGTGCGAAGAGGAAGGTGCTATTCTCACCTGTGGCGCCATCATT CGTGAGACTCTCGGATGGGGCTTGGATGAGGATGACGATCGCAAGGACATCTGGATGGATGACGCAAAGGCTAGT ATTGCCAGGGGGAAGTACGAAACTGCCAGGGCTATCTATGCCTACGCGCTGCGTGTTTTCGTCAACCGTCGTTCA ATCTGGATTGCGGCAGCCGAGTTGGAGCGCAACCACGGTAGTAAAGAAGCGCTGTGGCAAGTCCTTGAAAAGGCC GTTGAGGCGTGCCCGCAAAGTGAGGAACTATGGCTGCAGCTTGCGAAAGAAAAGTGGCAGTCCGGCGAGATCGAC GATGCCCGGAGAGTGCTCGGCCGTGCCTTCAACCAGAACCCCAACAACGAGGATATCTGGCTGGCTGCTGTCAAG CTAGAGGCCGATGCCAACCAAACATCCGAAGCCAGAGAACTTCTTGCAACTGCTCGACGCGAAGCGGGTACGGAC CGCGTTTGGATAAAGAGCGTCGCGTTCGAGCGACAGCTCGGCAACATCGACGAGGCGCTCGATCTGGTGAACCAA GGACTTCAAATCTATCCCAAGGCGGACAAACTCTGGATGATGAAGGGACAGATCTACGAAGCCCAAAACAAATAC CCACAGGCTCGGGAAGCTTACGGGACCGGAACCAGAGCCTGCAACAAGTCCATCCCACTCTGGCTGTTGGCCTCA AGACTTGAAGAAAAGGCCGGTGCGGTCGTAAAGGCTCGTTCAGTGCTCGACCGTGCCCGCCTTGCGGTCCCCAAG AGTCCAGAGCTCTGGACCGAAAGTGTGCGCGTAGAGCGGCGAGCAAACAACATTGCCCAAGCCAAGGTCCTAATG GCCAAGGCACTGCAAGAAGTCCCTACCTCCGGATTACTATGGAGCGAAAGCATTTGGCACCTGGAGCCGCGCGCG CAACGGAAAGCTCGGAGTCTGGAAGCGATCAAGAAGGCTGATAACGATCCGATTCTCTTTATTACCGTGGCGCGG ATTTTCTGGGGCGAGCGCCGATTGGAAAAAGCACTCACCTGGTTCGAGAAAGCCATTGTCTCGGATAGTGATATG GGCGACGCATGGGCTTGGTACTACAAATTCTTGTTGCAGCATGGCACAGAGGAAAAACGCGCCGATGTAATATCC AAGTGTATTTCGACCGAGCCCAAGCACGGAGAAATCTGGCAATCCGTGGCCAAAGACCCCGCCAACGCGCTCAAG TCGACAGAAGAGATTTTGAAGATGGTTGCAGACCGTCTGACCTAA |
Gene | >Ani_SJS100_1|g6295.t1 ATGGCGTCTGGGCGTAAGGACTTTTTGAGCCAAGCGGCTCCCGAGAACTATGTTGCCGGTCTTGGTCGCGGTGCC ACTGGCTTCACCACCCGTTCAGATCTCGGACCCGCGCGAGAAGGCCCCACGCCAGAACAGATCCAGGCAGCACTG GCGAAGCGAGCCCAGCTGCTTGGAGCTGCTCCTCCCACAGCTTATGGCGCAGGGCGAGAGAAGGGTGGTAAAGAT GAGAAGGCGGATGAAGAGGAAGATGACGAGCGATTTCAAGACCCGGACAATGAAGTCGGGCTATTCGCATATGGT CAGTTCGACCAAGAGGATGATGAGGCGGACCGCATCTACAGAGAGGTGGATGAAAAGATGGACAAGCGCCGGAAG ATGAGAAGGTTAGTTCCCCGCCCCTTTGCCTCCCCTTCTGCTATTTCTATGAAGCGATTTGTTCATCCGCTTCTC CATATGCGGTTTGCCTGGACAGATTACCGACGTAATTCCTCCACCATTCACAGGGAAGCTCGCGAACAGCAAGAA CGAGAAGACTACGAACGCAAGAACCCTAAGATTCAGCAGCAATTTGCAGATCTAAAACGATCCTTAGCCTCTGTC TCCGAGGACGAGTGGGCAAACCTCCCGGAGGTGGGAGATCTCACCGGAAAGAACCGACGCGCAAAGCAGAACCTT CGGCAGAGATTCTACGCAGTACCGGACAGTGTGATCGCGAGCGCAAGAGACTCGACCCAGTTTGAGACAACGATT GCAGAGGACGGGACCCAGACCGCAGCCAATGGAGCGGAGGCAGCTGATGGGACAATCACCAATTTTGCAGACATC AGTGCTGCGCGTGATAAAGTCTTGAAAGTTAGGCTCGACCAAGCGGCGATGGGATCATCTGGGGATTCTGCGTCT GGAAGCGCTACCAACATCGATCCAAAGGGCTACCTTACAAGTCTCACGCAGTCTGAGCTGAAAGCTGGAGAAGTA GAAATTGGAGACATTAAGCGGGTCCGCGTTTTGTTGGAATCTGTAACGAAAACGAATCCCAAGCATGCGCCGGGA TGGATTGCGCTGGCGCGTCTAGAAGAATTAGCCGGTAAAATCGTGACTGCCAGGAATGTAATCGCCAAGGGTTGC GAGTTGTGCCCGAAAAGTGAAGATGCCTGGCTTGAAAACATTCGCCTTAACGAGGGCCATAATGCCAAGGTGATT GCGGCTAATGCCATCAAGAACAATGACCGTTCTACAAGACTATGGATCGAAGCCATGCGATTGGAGACAGAGCCT CGTGCGAAGAAGAACGTTCTTAGACAGGCGATCCTTCACATACCTCAGTCTGTTACGATCTGGAAAGAAGCCGTC AACCTGGAGGACGACCCTGCCGATGCACGTCTGCTTCTGGCGAAGGCAGTTGAGATGATCCCCCTTTCCGTTGAG CTCTGGCTGGCTCTGGCTCGCCTAGAATCACCGGAGAATGCACAGAAGGTTCTCAATGCCGCCCGCAAAGCGGTT CCCACAAGCCACGAAGTCTGGGTCGCTGCTGCCCGCCTGCAGGAGCAGATGGGTACGTTCGAGAAGGTGAATGTG ATGAAGAGAGCTGTCCAAGCCCTCGCGAGAGAAAACGCCATGCTCAAACGGGAGGAGTGGGTAGCGGAGGCTGAG AAGTGCGAAGAGGAAGGTGCTATTCTCACCTGTGGCGCCATCATTCGTGAGACTCTCGGATGGGGCTTGGATGAG GATGACGATCGCAAGGACATCTGGATGGATGACGCAAAGGCTAGTATTGCCAGGGGGAAGTACGAAACTGCCAGG GCTATCTATGCCTACGCGCTGCGTGTTTTCGTCAACCGTCGTTCAATCTGGATTGCGGCAGCCGAGTTGGAGCGC AACCACGGTAGTAAAGAAGCGCTGTGGCAAGTCCTTGAAAAGGCCGTTGAGGCGTGCCCGCAAAGTGAGGAACTA TGGCTGCAGCTTGCGAAAGAAAAGTGGCAGTCCGGCGAGATCGACGATGCCCGGAGAGTGCTCGGCCGTGCCTTC AACCAGAACCCCAACAACGAGGATATCTGGCTGGCTGCTGTCAAGCTAGAGGCCGATGCCAACCAAACATCCGAA GCCAGAGAACTTCTTGCAACTGCTCGACGCGAAGCGGGTACGGACCGCGTTTGGATAAAGAGCGTCGCGTTCGAG CGACAGCTCGGCAACATCGACGAGGCGCTCGATCTGGTGAACCAAGGACTTCAAATCTATCCCAAGGCGGACAAA CTCTGGATGATGAAGGGACAGATCTACGAAGCCCAAAACAAATACCCACAGGCTCGGGAAGCTTACGGGACCGGA ACCAGAGCCTGCAACAAGTCCATCCCACTCTGGCTGTTGGCCTCAAGACTTGAAGAAAAGGCCGGTGCGGTCGTA AAGGCTCGTTCAGTGCTCGACCGTGCCCGCCTTGCGGTCCCCAAGAGTCCAGAGCTCTGGACCGAAAGTGTGCGC GTAGAGCGGCGAGCAAACAACATTGCCCAAGCCAAGGTCCTAATGGCCAAGGCACTGCAAGAAGTCCCTACCTCC GGATTACTATGGAGCGAAAGCATTTGGCACCTGGAGCCGCGCGCGCAACGGAAAGCTCGGAGTCTGGAAGCGATC AAGAAGGCTGATAACGATCCGATTCTCTTTATTACCGTGGCGCGGATTTTCTGGGGCGAGCGCCGATTGGAAAAA GCACTCACCTGGTTCGAGAAAGCCATTGTCTCGGATAGTGATATGGGCGACGCATGGGCTTGGTACTACAAATTC TTGTTGCAGCATGGCACAGAGGTATGTCTTTTATTCATAACAAAAAAGAATAATCTGTCTAGGATGTACGTGACT GACAGCAATTCCCAGGAAAAACGCGCCGATGTAATATCCAAGTGTATTTCGACCGAGCCCAAGCACGGAGAAATC TGGCAATCCGTGGCCAAAGACCCCGCCAACGCGCTCAAGTCGACAGAAGAGATTTTGAAGATGGTTGCAGACCGT CTGACCTAA |