Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6288.t1
Gene name
Locationscaffold_038:186192..187889
Strand+
Gene length (bp)1697
Transcript length (bp)1512
Coding sequence length (bp)1512
Protein length (aa) 504

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04597 Ribophorin_I Ribophorin I 1.5E-149 44 493

GO

GO Term Description Terminal node
GO:0006486 protein glycosylation Yes
GO:0016021 integral component of membrane Yes
GO:0019538 protein metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0070085 glycosylation No
GO:0043413 macromolecule glycosylation No
GO:0043412 macromolecule modification No
GO:0071704 organic substance metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0008152 metabolic process No
GO:0036211 protein modification process No
GO:0044238 primary metabolic process No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No
GO:0008150 biological_process No
GO:0006807 nitrogen compound metabolic process No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 477 499 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6288.t1
MRPFTALAALCGLFLSSNSLVYADSAPSSSPVALPRDFKPPQVFKNANLVRNTNLEKGYLRETVNVVVENVDKKP
QSDYYLSFPSDLYDKVGALEVRDKSAPEQGRFEVEATEFDSSRDFQYFVVHLPKPLAPSSQITLGISYSALNTLK
PRPAAISQNDRQYLAYAFSAYAPSAYTTTTQKTKIKFPSTNVPDYTSTDLTSGADPERQGATYTYGPYADVAPET
TYPASVRYEFTKPVITATLLERDLEVSHWGGNLATEERYWLRNNGSKLTDNFNRVEWTISSYQQLPSSAIRELKI
PLKPGSVDPYFTDDIGNVSTSRYRPGKVPNRDASLELRPRFPIFGGWNYSFRIGWNNDLSAFLRKAVTGADSYVL
KVPFIEGPKVSEGIQYEKAVVRIILPEGARNVRYELLEKATSNGLPGANQIQTELTSHKTFMDTLGRTALTLTVE
ELTDEARDSQIVVTYDYSLWDGLRKPVTITAGLFTVFVAAWAIGNIDVSIKKR*
Coding >Ani_SJS100_1|g6288.t1
ATGAGGCCGTTTACCGCACTTGCTGCGCTGTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATGCCGACTCG
GCTCCCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAGCCTCCCCAAGTGTTTAAGAACGCCAATCTTGTC
CGCAACACCAATTTGGAGAAGGGATACCTACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACAAGAAGCCG
CAGTCCGACTACTACTTGTCCTTCCCATCCGACCTTTACGACAAGGTCGGTGCCCTAGAAGTCCGTGATAAATCG
GCTCCTGAACAGGGACGCTTCGAAGTGGAAGCTACTGAGTTCGACTCAAGCAGGGACTTCCAGTACTTCGTTGTT
CACCTCCCCAAGCCTCTCGCCCCTTCGTCGCAGATCACTCTGGGCATCTCCTACTCCGCCCTCAACACCCTGAAG
CCCCGTCCTGCGGCCATCAGCCAGAATGATCGCCAGTACCTCGCCTATGCCTTCTCTGCCTACGCTCCCTCGGCT
TACACGACAACGACCCAGAAGACCAAGATCAAGTTCCCCAGCACCAATGTTCCCGACTACACCTCCACGGACCTG
ACGTCGGGCGCGGATCCAGAGCGCCAGGGTGCCACCTACACCTACGGACCCTACGCCGACGTCGCTCCCGAGACC
ACCTACCCGGCCAGTGTCCGGTACGAGTTCACCAAGCCCGTCATCACTGCCACTCTTCTGGAGCGTGACCTGGAA
GTGTCCCACTGGGGCGGCAACCTGGCGACGGAAGAGCGCTACTGGCTGCGCAACAACGGCTCCAAGCTCACCGAC
AACTTCAACCGCGTGGAATGGACCATCAGCAGCTACCAGCAGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATC
CCCCTCAAGCCCGGCTCCGTGGACCCCTACTTCACCGACGACATTGGCAACGTTTCCACGAGCCGCTACCGTCCC
GGAAAGGTCCCGAACCGTGACGCCTCCCTGGAGCTTCGTCCCCGGTTCCCCATCTTCGGCGGATGGAACTACAGC
TTCCGCATTGGCTGGAACAACGACCTCTCTGCCTTCCTTCGCAAGGCTGTCACCGGCGCTGATTCCTACGTCCTC
AAGGTCCCCTTCATCGAGGGCCCCAAGGTTTCCGAGGGTATTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTC
CCCGAGGGTGCCCGGAACGTCCGCTACGAGCTCCTCGAGAAGGCGACTAGCAATGGTCTCCCCGGTGCGAACCAG
ATCCAGACTGAGCTCACCAGCCACAAGACTTTCATGGATACCCTAGGACGCACGGCGCTGACTTTGACCGTGGAG
GAGTTGACTGATGAGGCCCGTGACTCGCAGATAGTGGTCACTTACGACTACTCTCTGTGGGATGGATTGCGCAAG
CCCGTGACCATCACGGCGGGGCTGTTCACCGTGTTTGTTGCCGCGTGGGCGATTGGAAATATTGACGTGAGTATT
AAGAAGCGGTAG
Transcript >Ani_SJS100_1|g6288.t1
ATGAGGCCGTTTACCGCACTTGCTGCGCTGTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATGCCGACTCG
GCTCCCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAGCCTCCCCAAGTGTTTAAGAACGCCAATCTTGTC
CGCAACACCAATTTGGAGAAGGGATACCTACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACAAGAAGCCG
CAGTCCGACTACTACTTGTCCTTCCCATCCGACCTTTACGACAAGGTCGGTGCCCTAGAAGTCCGTGATAAATCG
GCTCCTGAACAGGGACGCTTCGAAGTGGAAGCTACTGAGTTCGACTCAAGCAGGGACTTCCAGTACTTCGTTGTT
CACCTCCCCAAGCCTCTCGCCCCTTCGTCGCAGATCACTCTGGGCATCTCCTACTCCGCCCTCAACACCCTGAAG
CCCCGTCCTGCGGCCATCAGCCAGAATGATCGCCAGTACCTCGCCTATGCCTTCTCTGCCTACGCTCCCTCGGCT
TACACGACAACGACCCAGAAGACCAAGATCAAGTTCCCCAGCACCAATGTTCCCGACTACACCTCCACGGACCTG
ACGTCGGGCGCGGATCCAGAGCGCCAGGGTGCCACCTACACCTACGGACCCTACGCCGACGTCGCTCCCGAGACC
ACCTACCCGGCCAGTGTCCGGTACGAGTTCACCAAGCCCGTCATCACTGCCACTCTTCTGGAGCGTGACCTGGAA
GTGTCCCACTGGGGCGGCAACCTGGCGACGGAAGAGCGCTACTGGCTGCGCAACAACGGCTCCAAGCTCACCGAC
AACTTCAACCGCGTGGAATGGACCATCAGCAGCTACCAGCAGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATC
CCCCTCAAGCCCGGCTCCGTGGACCCCTACTTCACCGACGACATTGGCAACGTTTCCACGAGCCGCTACCGTCCC
GGAAAGGTCCCGAACCGTGACGCCTCCCTGGAGCTTCGTCCCCGGTTCCCCATCTTCGGCGGATGGAACTACAGC
TTCCGCATTGGCTGGAACAACGACCTCTCTGCCTTCCTTCGCAAGGCTGTCACCGGCGCTGATTCCTACGTCCTC
AAGGTCCCCTTCATCGAGGGCCCCAAGGTTTCCGAGGGTATTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTC
CCCGAGGGTGCCCGGAACGTCCGCTACGAGCTCCTCGAGAAGGCGACTAGCAATGGTCTCCCCGGTGCGAACCAG
ATCCAGACTGAGCTCACCAGCCACAAGACTTTCATGGATACCCTAGGACGCACGGCGCTGACTTTGACCGTGGAG
GAGTTGACTGATGAGGCCCGTGACTCGCAGATAGTGGTCACTTACGACTACTCTCTGTGGGATGGATTGCGCAAG
CCCGTGACCATCACGGCGGGGCTGTTCACCGTGTTTGTTGCCGCGTGGGCGATTGGAAATATTGACGTGAGTATT
AAGAAGCGGTAG
Gene >Ani_SJS100_1|g6288.t1
ATGAGGCCGTTTACCGCACTTGCTGCGCTGTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATGCCGACTCG
GCTCCCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAGCCTCCCCAAGTGTTTAAGAACGCCAATCTTGTC
CGCAACACCAATTTGGAGAAGGGATACCTACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACAAGAAGCCG
CAGTCCGACTACTACTTGTCCTTCCCATCCGACCTTTACGACAAGGTCGGTGCCCTAGAAGTCCGTGATAAATCG
GCTCCTGAACAGGGACGCTTCGAAGTGGAAGCTACTGAGTTCGACTCAAGCAGGTAAGTCGACCACAATGGCGGC
CAATGGCTGGTTGGTGGAGCACGAAGCCACGGTTGCTTGATCTATGCATGGTGGATGTATCCCGGGCGGTTTGCT
GATCTCCTCTCTTTCTTTACACAGGGACTTCCAGTACTTCGTTGTTCACCTCCCCAAGCCTCTCGCCCCTTCGTC
GCAGATCACTCTGGGCATCTCCTACTCCGCCCTCAACACCCTGAAGCCCCGTCCTGCGGCCATCAGCCAGAATGA
TCGCCAGTACCTCGCCTATGCCTTCTCTGCCTACGCTCCCTCGGCTTACACGACAACGACCCAGAAGACCAAGAT
CAAGTTCCCCAGCACCAATGTTCCCGACTACACCTCCACGGACCTGACGTCGGGCGCGGATCCAGAGCGCCAGGG
TGCCACCTACACCTACGGACCCTACGCCGACGTCGCTCCCGAGACCACCTACCCGGCCAGTGTCCGGTACGAGTT
CACCAAGCCCGTCATCACTGCCACTCTTCTGGAGCGTGACCTGGAAGTGTCCCACTGGGGCGGCAACCTGGCGAC
GGAAGAGCGCTACTGGCTGCGCAACAACGGCTCCAAGCTCACCGACAACTTCAACCGCGTGGAATGGACCATCAG
CAGCTACCAGCAGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATCCCCCTCAAGCCCGGCTCCGTGGACCCCTA
CTTCACCGACGACATTGGCAACGTTTCCACGAGCCGCTACCGTCCCGGAAAGGTCCCGAACCGTGACGCCTCCCT
GGAGCTTCGTCCCCGGTTCCCCATCTTCGGCGGATGGAACTACAGCTTCCGCATTGGCTGGAACAACGACCTCTC
TGCCTTCCTTCGCAAGGCTGTCACCGGCGCTGATTCCTACGTCCTCAAGGTCCCCTTCATCGAGGGCCCCAAGGT
TTCCGAGGGTATTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTCCCCGAGGGTGCCCGGAACGTCCGCTACGA
GCTCCTCGAGAAGGCGACTAGCAATGGTCTCCCCGGTGCGAACCAGATCCAGACTGAGCTCACCAGCCACAAGAC
TTTCATGGATACCCTAGGACGCACGGCGCTGACTTTGACCGTGGAGGAGTTGACTGATGAGGCCCGTGACTCGCA
GATAGTGGTAAGTAACTACCTCCATACGCCGGATAGATATCGGGAATAGTCCAGCTCATTTTTGGATATAGGTCA
CTTACGACTACTCTCTGTGGGATGGATTGCGCAAGCCCGTGACCATCACGGCGGGGCTGTTCACCGTGTTTGTTG
CCGCGTGGGCGATTGGAAATATTGACGTGAGTATTAAGAAGCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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