© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6278.t1 |
| Gene name | |
| Location | scaffold_038:153084..154934 |
| Strand | - |
| Gene length (bp) | 1850 |
| Transcript length (bp) | 1677 |
| Coding sequence length (bp) | 1677 |
| Protein length (aa) | 559 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00909 | Ammonium_transp | Ammonium Transporter Family | 7.4E-118 | 51 | 457 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008519 | ammonium transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0072488 | ammonium transmembrane transport | Yes |
| GO:0098655 | cation transmembrane transport | No |
| GO:0055085 | transmembrane transport | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0015267 | channel activity | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0005216 | ion channel activity | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0006812 | cation transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0005261 | cation channel activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 81 | 103 | 22 |
| 3 | 141 | 163 | 22 |
| 4 | 168 | 190 | 22 |
| 5 | 205 | 227 | 22 |
| 6 | 240 | 259 | 19 |
| 7 | 269 | 291 | 22 |
| 8 | 303 | 322 | 19 |
| 9 | 326 | 345 | 19 |
| 10 | 357 | 376 | 19 |
| 11 | 405 | 427 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6278.t1 MSDKAGVFIPQYASYNWTGAPSDYEALTTNEIGGDSRTENLNKWFQPGDQAFIIVSSAMVMVMIPGLAFLYSGLA RRKSALSMIWACMASFSVVTFQWYFWGYSLAFSPTATNGYIGNLRNFGLMKTLADPSPGSPLISNLLFAFYEMQF CGVTAAIIMGAVAERGRMLPAMVFVFIWATIVYCPLACWAWNSNGWAYKYGVLDYAGGGPVEIGSGLSALAYSMV LGRRQERMMLNFRPHNVSLILLGTVFLWFGWLGFNGGSAFGANLRATMACWNSNLTAAFAGMTWVLLDWRLARKW SMVGWCSGTISGLVAATPASGFVPPWASVILGVVTGIVCNYSTKVKYWIRIDDSMDVFAEHGVAGIVGLIFNALF ADDSIVGLDGVNTGSGQGGWLIHNYKQLYIQIAYVVATCAYSFVMSAIIAYAINAIPGLKLRASEEAELLGMDDD QLGEFAYDYVEVRRDYLAWTPQQHNQLEDGHQIPAAARYGIGEHSEMMLDGHAPVGVDSRGCSEGDSGIQELKMQ PAPRQVAEHHAPHEPEPVEEPIPTTQINEKVTT* |
| Coding | >Ani_SJS100_1|g6278.t1 ATGTCGGACAAAGCAGGCGTCTTTATCCCGCAATATGCGTCCTACAACTGGACGGGCGCTCCCTCCGACTATGAG GCTCTCACGACCAACGAAATCGGTGGCGATTCCAGAACGGAAAATCTGAACAAATGGTTTCAACCCGGTGACCAA GCATTCATCATCGTGTCCTCGGCCATGGTGATGGTCATGATTCCTGGTCTGGCCTTCCTTTACTCCGGTCTCGCG CGCCGCAAGTCAGCTCTGAGTATGATCTGGGCCTGTATGGCCTCGTTCTCCGTCGTCACCTTCCAATGGTATTTC TGGGGTTATTCTCTCGCCTTTTCTCCGACTGCAACCAACGGCTACATCGGCAACCTGCGCAACTTCGGTTTGATG AAGACCTTGGCCGATCCTAGTCCGGGCTCTCCACTGATTTCGAACCTTCTCTTTGCTTTCTATGAGATGCAATTC TGCGGAGTTACGGCAGCGATTATCATGGGAGCTGTGGCGGAACGTGGACGCATGCTCCCCGCAATGGTGTTCGTC TTCATTTGGGCCACGATTGTGTACTGTCCTCTGGCGTGCTGGGCATGGAACTCGAACGGTTGGGCCTACAAGTAT GGAGTCCTGGATTACGCTGGTGGCGGTCCCGTCGAGATCGGGTCTGGTCTGTCGGCACTTGCCTACTCCATGGTT TTGGGCCGTCGCCAGGAGCGGATGATGTTGAACTTCCGCCCGCACAACGTCTCTCTCATTCTCCTGGGAACTGTC TTCCTTTGGTTCGGATGGCTGGGATTCAACGGTGGCTCGGCTTTTGGAGCGAACCTTCGTGCCACCATGGCTTGC TGGAACTCTAACTTGACCGCTGCCTTCGCCGGCATGACCTGGGTTCTTCTCGATTGGCGCTTGGCTCGCAAGTGG TCCATGGTCGGCTGGTGCTCTGGTACCATCTCGGGCCTCGTTGCGGCTACTCCGGCTTCTGGTTTCGTTCCTCCC TGGGCTAGTGTGATCCTGGGCGTTGTGACTGGTATTGTTTGCAACTACTCCACCAAGGTGAAATACTGGATCCGT ATCGACGACTCGATGGATGTGTTCGCGGAACACGGTGTTGCGGGAATTGTCGGTCTTATCTTCAACGCCCTCTTT GCGGACGATTCGATTGTTGGACTGGACGGTGTCAACACTGGATCGGGACAGGGAGGCTGGCTGATCCACAACTAC AAGCAACTCTATATTCAAATCGCCTATGTCGTCGCTACCTGCGCCTACTCATTCGTCATGTCCGCCATCATTGCC TATGCCATCAACGCCATTCCCGGTCTGAAACTGCGTGCCTCGGAAGAAGCCGAACTGCTGGGTATGGACGATGAC CAGCTGGGTGAATTCGCCTACGACTACGTCGAAGTCCGCCGTGACTACCTCGCCTGGACCCCTCAGCAGCACAAC CAGCTTGAAGACGGCCACCAGATTCCCGCTGCGGCGCGGTACGGAATTGGCGAGCACAGTGAGATGATGCTGGAC GGCCACGCCCCGGTTGGTGTGGACAGCCGTGGCTGCAGCGAGGGTGACTCGGGCATCCAGGAGCTGAAGATGCAA CCTGCGCCGCGACAGGTAGCAGAACACCACGCGCCGCATGAACCCGAGCCGGTCGAAGAGCCTATCCCGACGACT CAAATCAACGAGAAGGTGACGACTTGA |
| Transcript | >Ani_SJS100_1|g6278.t1 ATGTCGGACAAAGCAGGCGTCTTTATCCCGCAATATGCGTCCTACAACTGGACGGGCGCTCCCTCCGACTATGAG GCTCTCACGACCAACGAAATCGGTGGCGATTCCAGAACGGAAAATCTGAACAAATGGTTTCAACCCGGTGACCAA GCATTCATCATCGTGTCCTCGGCCATGGTGATGGTCATGATTCCTGGTCTGGCCTTCCTTTACTCCGGTCTCGCG CGCCGCAAGTCAGCTCTGAGTATGATCTGGGCCTGTATGGCCTCGTTCTCCGTCGTCACCTTCCAATGGTATTTC TGGGGTTATTCTCTCGCCTTTTCTCCGACTGCAACCAACGGCTACATCGGCAACCTGCGCAACTTCGGTTTGATG AAGACCTTGGCCGATCCTAGTCCGGGCTCTCCACTGATTTCGAACCTTCTCTTTGCTTTCTATGAGATGCAATTC TGCGGAGTTACGGCAGCGATTATCATGGGAGCTGTGGCGGAACGTGGACGCATGCTCCCCGCAATGGTGTTCGTC TTCATTTGGGCCACGATTGTGTACTGTCCTCTGGCGTGCTGGGCATGGAACTCGAACGGTTGGGCCTACAAGTAT GGAGTCCTGGATTACGCTGGTGGCGGTCCCGTCGAGATCGGGTCTGGTCTGTCGGCACTTGCCTACTCCATGGTT TTGGGCCGTCGCCAGGAGCGGATGATGTTGAACTTCCGCCCGCACAACGTCTCTCTCATTCTCCTGGGAACTGTC TTCCTTTGGTTCGGATGGCTGGGATTCAACGGTGGCTCGGCTTTTGGAGCGAACCTTCGTGCCACCATGGCTTGC TGGAACTCTAACTTGACCGCTGCCTTCGCCGGCATGACCTGGGTTCTTCTCGATTGGCGCTTGGCTCGCAAGTGG TCCATGGTCGGCTGGTGCTCTGGTACCATCTCGGGCCTCGTTGCGGCTACTCCGGCTTCTGGTTTCGTTCCTCCC TGGGCTAGTGTGATCCTGGGCGTTGTGACTGGTATTGTTTGCAACTACTCCACCAAGGTGAAATACTGGATCCGT ATCGACGACTCGATGGATGTGTTCGCGGAACACGGTGTTGCGGGAATTGTCGGTCTTATCTTCAACGCCCTCTTT GCGGACGATTCGATTGTTGGACTGGACGGTGTCAACACTGGATCGGGACAGGGAGGCTGGCTGATCCACAACTAC AAGCAACTCTATATTCAAATCGCCTATGTCGTCGCTACCTGCGCCTACTCATTCGTCATGTCCGCCATCATTGCC TATGCCATCAACGCCATTCCCGGTCTGAAACTGCGTGCCTCGGAAGAAGCCGAACTGCTGGGTATGGACGATGAC CAGCTGGGTGAATTCGCCTACGACTACGTCGAAGTCCGCCGTGACTACCTCGCCTGGACCCCTCAGCAGCACAAC CAGCTTGAAGACGGCCACCAGATTCCCGCTGCGGCGCGGTACGGAATTGGCGAGCACAGTGAGATGATGCTGGAC GGCCACGCCCCGGTTGGTGTGGACAGCCGTGGCTGCAGCGAGGGTGACTCGGGCATCCAGGAGCTGAAGATGCAA CCTGCGCCGCGACAGGTAGCAGAACACCACGCGCCGCATGAACCCGAGCCGGTCGAAGAGCCTATCCCGACGACT CAAATCAACGAGAAGGTGACGACTTGA |
| Gene | >Ani_SJS100_1|g6278.t1 ATGTCGGACAAAGCAGGCGTCTTTATCCCGCAATATGCGTCCTACAACTGGACGGGCGCTCCCTCCGACTATGAG GCTCTCACGACCAACGAAATCGGTGGCGATTCCAGTTAGTTACCCTGCTTTTGTTGGTCGTTTTGGCTTCCCCAT GACTTACCTGCTGGCTAGGAACGGAAAATCTGAACAAATGGTTTCAACCCGGTGACCAAGCATTCATCATCGTGT CCTCGGCCATGGTGATGGTCATGATTCCTGGTCTGGCCTTCCTTTACTCCGGTCTCGCGCGCCGCAAGTCAGCTC TGAGTATGATCTGGGCCTGTATGGCCTCGTTCTCCGTCGTCACCTTCCAATGGTATTTCTGGGGTTATTCTCTCG CCTTTTCTCCGACTGCAACCAACGGCTACATCGGCAACCTGCGCAACTTCGGTTTGATGAAGACCTTGGCCGATC CTAGTCCGGGCTCTCCACTGATTTCGAACCTTCTCTTTGCTTTCTATGAGGTATGTTACGACCGACAATCGAGAC CTTTGTAATCAATAGCTGACAGGACCGGAATAGATGCAATTCTGCGGAGTTACGGCAGCGATTATCATGGGAGCT GTGGCGGAACGTGGACGCATGCTCCCCGCAATGGTGTTCGTCTTCATTTGGGCCACGATTGTGTACTGTCCTCTG GCGTGCTGGGCATGGAACTCGAACGGTTGGGCCTACAAGTATGGAGTCCTGGATTACGCTGGTGGCGGTCCCGTC GAGATCGGGTCTGGTCTGTCGGCACTTGCCTACTCCATGGTTTTGGGCCGTCGCCAGGAGCGGATGATGTTGAAC TTCCGCCCGCACAACGTCTCTCTCATTCTCCTGGGAACTGTCTTCCTTTGGTTCGGATGGCTGGGATTCAACGGT GGCTCGGCTTTTGGAGCGAACCTTCGTGCCACCATGGCTTGCTGGAACTCTAACTTGACCGCTGCCTTCGCCGGC ATGACCTGGGTTCTTCTCGATTGGCGCTTGGCTCGCAAGTGGTCCATGGTCGGCTGGTGCTCTGGTACCATCTCG GGCCTCGTTGCGGCTACTCCGGCTTCTGGTTTCGTTCCTCCCTGGGCTAGTGTGATCCTGGGCGTTGTGACTGGT ATTGTTTGCAACTACTCCACCAAGGGTAAGTCACGCTTTTGCTGGCCAGTGATCCCGTTCAAACACTGACTGAGT TTACAGTGAAATACTGGATCCGTATCGACGACTCGATGGATGTGTTCGCGGAACACGGTGTTGCGGGAATTGTCG GTCTTATCTTCAACGCCCTCTTTGCGGACGATTCGATTGTTGGACTGGACGGTGTCAACACTGGATCGGGACAGG GAGGCTGGCTGATCCACAACTACAAGCAACTCTATATTCAAATCGCCTATGTCGTCGCTACCTGCGCCTACTCAT TCGTCATGTCCGCCATCATTGCCTATGCCATCAACGCCATTCCCGGTCTGAAACTGCGTGCCTCGGAAGAAGCCG AACTGCTGGGTATGGACGATGACCAGCTGGGTGAATTCGCCTACGACTACGTCGAAGTCCGCCGTGACTACCTCG CCTGGACCCCTCAGCAGCACAACCAGCTTGAAGACGGCCACCAGATTCCCGCTGCGGCGCGGTACGGAATTGGCG AGCACAGTGAGATGATGCTGGACGGCCACGCCCCGGTTGGTGTGGACAGCCGTGGCTGCAGCGAGGGTGACTCGG GCATCCAGGAGCTGAAGATGCAACCTGCGCCGCGACAGGTAGCAGAACACCACGCGCCGCATGAACCCGAGCCGG TCGAAGAGCCTATCCCGACGACTCAAATCAACGAGAAGGTGACGACTTGA |