© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6268.t1 |
| Gene name | |
| Location | scaffold_038:128314..129811 |
| Strand | + |
| Gene length (bp) | 1497 |
| Transcript length (bp) | 1176 |
| Coding sequence length (bp) | 1176 |
| Protein length (aa) | 392 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 42 | 21 |
| 2 | 57 | 76 | 19 |
| 3 | 134 | 156 | 22 |
| 4 | 181 | 203 | 22 |
| 5 | 215 | 237 | 22 |
| 6 | 257 | 279 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6268.t1 MSSAGANYSAAYLAQSRVTEVTVAYSVPIPVEILTTVWRLWIKLRPSSEHGLTFDDYVMIWATIIGVGVCVSGLV YGPPYGFGRHVAALPTKEVETFMMGDYIFSHFYDVAIASTKLSVLALYYRIFITPKFRLVIISTVVWVILWLMTM EIVLGLECRPIAKFWNSSVEGTCFNLVAFSYFTNIANLVTDIWIFLLPLPIILRLQITKNKKIGLSLLFSVGLAT CAISAARLTVVVTQGSSDYTWAGVPLGILSAWEPLGGILCANLPIIYKSLAAVLRSIRGTLRTHGSRSAHPSSTQ RQTKSSANNHHNTWLQLNNGSGAGNSYRSEILALKSMDDDDDDTEMQPMRGMNTIMVERQFEQEVIDQHHDPSLN HHDGREGDEEPLRGGK* |
| Coding | >Ani_SJS100_1|g6268.t1 ATGAGCTCTGCAGGGGCGAACTATTCAGCGGCATACCTGGCACAGTCGCGTGTGACCGAGGTGACGGTGGCATAC TCGGTCCCGATCCCTGTTGAGATCTTGACTACCGTGTGGCGACTCTGGATCAAACTGCGGCCTTCCTCAGAGCAT GGCTTGACCTTTGACGACTACGTGATGATCTGGGCTACGATCATCGGTGTTGGCGTCTGCGTCAGTGGATTGGTT TACGGCCCTCCCTATGGGTTTGGTCGACATGTCGCCGCTCTACCAACCAAGGAAGTCGAAACGTTCATGATGGGC GACTATATCTTCAGTCACTTCTACGATGTTGCCATCGCCAGCACCAAGCTCTCCGTGTTGGCGTTATATTATCGC ATTTTCATCACCCCGAAATTCCGCCTGGTCATCATCTCAACCGTAGTTTGGGTAATTCTATGGCTCATGACCATG GAAATTGTCCTAGGGCTGGAGTGTCGCCCGATCGCGAAATTCTGGAATTCGAGCGTTGAAGGGACATGCTTCAAC CTTGTCGCCTTCAGTTACTTCACCAATATTGCGAACCTCGTCACTGACATCTGGATCTTTCTCCTCCCCCTACCC ATCATCCTGCGCCTCCAGATCACGAAAAACAAGAAAATAGGCCTCAGCTTGCTCTTCTCCGTCGGCTTAGCAACC TGCGCAATCAGCGCAGCCCGACTAACCGTCGTAGTCACCCAGGGCTCCTCCGACTACACCTGGGCCGGCGTCCCT CTTGGCATTCTCTCCGCCTGGGAACCCCTCGGCGGCATCCTCTGCGCCAACCTCCCGATAATCTACAAGTCCCTG GCTGCCGTACTCCGCAGCATAAGGGGCACTCTTCGCACCCACGGCTCACGCAGCGCACACCCCTCATCCACCCAG CGCCAAACGAAGTCCAGCGCCAACAACCATCACAATACCTGGCTTCAGCTGAATAATGGCAGCGGGGCCGGGAAT AGCTATCGCTCTGAGATCTTGGCTTTGAAGAGCATGGATGATGACGATGATGATACGGAGATGCAGCCCATGCGG GGGATGAATACGATTATGGTTGAGAGGCAATTCGAGCAGGAGGTTATCGATCAGCATCATGACCCTTCTCTTAAT CATCATGATGGGAGGGAGGGGGATGAAGAGCCCTTGAGGGGGGGAAAGTGA |
| Transcript | >Ani_SJS100_1|g6268.t1 ATGAGCTCTGCAGGGGCGAACTATTCAGCGGCATACCTGGCACAGTCGCGTGTGACCGAGGTGACGGTGGCATAC TCGGTCCCGATCCCTGTTGAGATCTTGACTACCGTGTGGCGACTCTGGATCAAACTGCGGCCTTCCTCAGAGCAT GGCTTGACCTTTGACGACTACGTGATGATCTGGGCTACGATCATCGGTGTTGGCGTCTGCGTCAGTGGATTGGTT TACGGCCCTCCCTATGGGTTTGGTCGACATGTCGCCGCTCTACCAACCAAGGAAGTCGAAACGTTCATGATGGGC GACTATATCTTCAGTCACTTCTACGATGTTGCCATCGCCAGCACCAAGCTCTCCGTGTTGGCGTTATATTATCGC ATTTTCATCACCCCGAAATTCCGCCTGGTCATCATCTCAACCGTAGTTTGGGTAATTCTATGGCTCATGACCATG GAAATTGTCCTAGGGCTGGAGTGTCGCCCGATCGCGAAATTCTGGAATTCGAGCGTTGAAGGGACATGCTTCAAC CTTGTCGCCTTCAGTTACTTCACCAATATTGCGAACCTCGTCACTGACATCTGGATCTTTCTCCTCCCCCTACCC ATCATCCTGCGCCTCCAGATCACGAAAAACAAGAAAATAGGCCTCAGCTTGCTCTTCTCCGTCGGCTTAGCAACC TGCGCAATCAGCGCAGCCCGACTAACCGTCGTAGTCACCCAGGGCTCCTCCGACTACACCTGGGCCGGCGTCCCT CTTGGCATTCTCTCCGCCTGGGAACCCCTCGGCGGCATCCTCTGCGCCAACCTCCCGATAATCTACAAGTCCCTG GCTGCCGTACTCCGCAGCATAAGGGGCACTCTTCGCACCCACGGCTCACGCAGCGCACACCCCTCATCCACCCAG CGCCAAACGAAGTCCAGCGCCAACAACCATCACAATACCTGGCTTCAGCTGAATAATGGCAGCGGGGCCGGGAAT AGCTATCGCTCTGAGATCTTGGCTTTGAAGAGCATGGATGATGACGATGATGATACGGAGATGCAGCCCATGCGG GGGATGAATACGATTATGGTTGAGAGGCAATTCGAGCAGGAGGTTATCGATCAGCATCATGACCCTTCTCTTAAT CATCATGATGGGAGGGAGGGGGATGAAGAGCCCTTGAGGGGGGGAAAGTGA |
| Gene | >Ani_SJS100_1|g6268.t1 ATGAGCTCTGCAGGGGCGAACTATTCAGCGGCATACCTGGCACAGTCGCGTGTGACCGAGGTGACGGTGGCATAC TCGGTCCCGATCCCTGTTGAGATCTTGACTACCGTGTGGCGACTCTGGATCAAACTGCGGCCTTCCTCAGAGCAT GGCTTGACCTTTGACGACTACGTGATGATCTGGGCTACGGTGAGCCATTTATCGGATAATTGTGTCTTAAAGGGC ACGTCCTCACTCATATGTCTCCATATAGATCATCGGTGTTGGCGTCTGCGTCAGTGGATTGGTTTACGGTGCGCT TGACCGGCCCGTCCCGTTGACATCTCTGGACCGTGTAGCTAACTACAAATCCACCTCACGGCAGGCCCTCCCTAT GGGTTTGGTCGACATGTCGCCGCTCTACCAACCAAGGAAGTCGAAACGTTCATGATGGTATGAAGGAAATAACCA AGTCAAGCCGACACTCACCTTCATATGGCTGACGGATCCGGGACTTCCATGGTAGGGCGACTATATCTTCAGTCA CTTCTACGATGTTGCCATCGCCAGCACCAAGCTCTCCGTGTTGGCGTTATATTATCGCATTTTCATCACCCCGAA ATTCCGCCTGGTCATCATCTCAACCGTAGTTTGGGTAATTCTATGGCTCATGACCATGGAAATTGTCCTAGGGCT GGAGTGTCGCCCGATCGCGAAATTCTGGAATTCGAGCGTTGAAGGGACATGCTTCAACCTTGTCGCCTTCAGTTA CTTCACCAATATTGCGAACCTCGTCACTGACATCTGGATCTTTCTCCTCCCCCTACCCATCATCCTGCGCCTCCA GATCACGAAAAACAAGAAAATAGGCCTCAGCTTGCTCTTCTCCGTCGGCTTAGCGTACGTACTCAGTCATAGTAC CTAAGAACTTCTAAGTAGCTGACAAACATCCAGAACCTGCGCAATCAGCGCAGCCCGACTAACCGTCGTAGTCAC CCAGGGCTCCTCCGACTACACCTGTAAGCCAACCCACCCTTTTTTCTTCTCCATCCACCCCAGCCCACTCACCTA AACACAGGGGCCGGCGTCCCTCTTGGCATTCTCTCCGCCTGGGAACCCCTCGGCGGCATCCTCTGCGCCAACCTC CCGATAATCTACAAGTCCCTGGCTGCCGTACTCCGCAGCATAAGGGGCACTCTTCGCACCCACGGCTCACGCAGC GCACACCCCTCATCCACCCAGCGCCAAACGAAGTCCAGCGCCAACAACCATCACAATACCTGGCTTCAGCTGAAT AATGGCAGCGGGGCCGGGAATAGCTATCGCTCTGAGATCTTGGCTTTGAAGAGCATGGATGATGACGATGATGAT ACGGAGATGCAGCCCATGCGGGGGATGAATACGATTATGGTTGAGAGGCAATTCGAGCAGGAGGTTATCGATCAG CATCATGACCCTTCTCTTAATCATCATGATGGGAGGGAGGGGGATGAAGAGCCCTTGAGGGGGGGAAAGTGA |