Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6252.t1
Gene name
Locationscaffold_038:63882..67684
Strand+
Gene length (bp)3802
Transcript length (bp)2706
Coding sequence length (bp)2706
Protein length (aa) 902

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.4E-11 351 405
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6.2E-11 576 633
PF10378 RRM Putative RRM domain 3.3E-05 139 168

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0003676 nucleic acid binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 39 61 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6252.t1
MMVQSEHNFTLALVSRPPQPAKPPKATKPAQTRPYWQSFCSVLFAVSVFFLISPLLFSGVIFGPGLFSLPPGHSY
RVDCLGDNCFSHLNADSTGFSHGAYASNNIPLQGLTDRNARRANIPAINTSAPVSDNMAASGAAFDMNFTPLLPS
QLLLGSPFQPGTPSAFASPQFANFGGFPQTNASSHAQNHQSHHQLGSPTQPSQNAGLYSGMMSTDGIGNSQMLGA
PQSPVGGLGPMGNAAYGSPAASVTPGLLSGTSRTVYLGNIPAETSAEEILNHVRSGQIESVRLLPDKNCAFISFL
DSNSATHFHSDAILKKLAIKGNDIKVGWGKASQVPTSVALAVQQSGASRNVYLGNLSEDMTEEELREELGKFGPI
DTVKIVKEKAIGFVHFLSISNAMKAVSQLPQEAKWQAPRRVFYGKDRCAYVSKTQQQNAAQFLGIAPGYAHILNS
ADRDLITNALAQQSVAAAAVATTAGGVNNLGNRTIYLGNIHPETTIEEICNVVRGGLLHHIRYIPDKHICFVTFI
DPTSAASFYALSNLQGLMIHNRRLKIGWGKHSGPLPPAIALAVSGGASRNVYVGNLDETWSEERLRQDFSEYGEI
ELVNTLREKSCAFVNFTNIANAIKAIEGMRNRDEYKRFKINFGKDRCGNPPRQAGNGGPQGRNGSGFEGPQSPSP
ALNGFQQNLSQSGSGSSPTHPALSPAPGSTGSQNGQHHRHPLQTVSSPSGILNVGANNPLTMYLNQMSAQQAQEQ
ENRLNDPMTLAGLQSQPQPPQQQSLYNGASTGELSNGSIEAPLHQHKPSTNGFLNVTNGSTGPGHHATASTSSLN
VPRAQHSRAVSLPSFSQEPFGSVSSQPPRSGLAHQPQSSFSSFTSALGGLSHAGFGLAIQNESSLPGWAEEEIGA
K*
Coding >Ani_SJS100_1|g6252.t1
ATGATGGTTCAGTCGGAGCACAACTTCACTCTTGCTTTAGTCTCTCGGCCTCCTCAACCCGCAAAGCCCCCTAAA
GCAACTAAACCAGCGCAGACACGTCCTTATTGGCAGTCTTTCTGCTCCGTGCTCTTTGCCGTCTCTGTTTTCTTC
CTTATTTCCCCCCTTCTCTTTTCGGGGGTGATCTTCGGGCCCGGCCTTTTTTCCCTCCCTCCTGGCCATTCCTAC
CGTGTTGATTGCCTAGGGGACAATTGTTTTTCCCACCTCAACGCGGACAGCACCGGTTTCTCTCACGGAGCATAC
GCCTCCAACAATATTCCCCTGCAGGGCCTAACGGACCGGAACGCTCGTCGAGCCAATATCCCTGCCATTAATACC
TCTGCTCCCGTTTCGGACAACATGGCCGCCTCTGGCGCCGCGTTCGACATGAACTTCACTCCCCTACTACCCTCT
CAGTTGTTGCTTGGTAGCCCCTTCCAGCCCGGTACTCCCTCCGCGTTCGCCTCGCCTCAATTCGCCAATTTCGGT
GGCTTTCCTCAGACGAATGCCTCTTCACATGCCCAGAATCACCAGAGCCACCATCAGCTCGGAAGTCCGACCCAG
CCCTCGCAGAATGCTGGCCTATATTCTGGTATGATGTCGACGGATGGTATAGGTAACTCTCAAATGCTGGGGGCC
CCTCAATCTCCTGTTGGTGGTTTGGGGCCCATGGGCAACGCAGCGTACGGAAGTCCCGCTGCCTCGGTAACCCCT
GGCTTGCTTTCGGGTACGAGCCGAACCGTATACCTAGGCAATATTCCGGCAGAAACCTCCGCGGAAGAAATCTTG
AACCATGTTCGAAGCGGCCAAATTGAGTCGGTTCGTTTGCTTCCTGACAAGAACTGTGCTTTCATCTCCTTCCTG
GACAGCAACTCCGCAACCCACTTTCACTCGGATGCAATCTTGAAGAAGCTTGCAATCAAGGGAAATGATATCAAG
GTGGGTTGGGGCAAAGCATCTCAGGTGCCTACTTCGGTCGCTTTGGCTGTGCAGCAGTCCGGCGCATCACGGAAT
GTATACTTGGGGAACCTGTCGGAGGACATGACAGAGGAAGAACTGCGGGAGGAGCTAGGAAAATTCGGCCCCATT
GACACCGTCAAGATAGTCAAGGAGAAAGCGATTGGATTTGTCCACTTCTTGTCGATCAGCAATGCAATGAAGGCT
GTTTCTCAACTTCCTCAGGAGGCTAAGTGGCAGGCACCCAGGCGGGTATTCTACGGCAAAGATCGGTGCGCTTAT
GTTTCCAAAACTCAGCAGCAAAATGCAGCTCAGTTCTTGGGCATTGCCCCTGGTTATGCACACATTCTCAATTCG
GCGGACCGTGATTTGATCACCAACGCACTCGCTCAGCAATCTGTCGCCGCCGCGGCTGTGGCCACCACAGCCGGT
GGAGTCAACAACTTGGGCAACCGGACCATCTATTTGGGCAACATTCACCCCGAAACGACTATCGAGGAGATTTGC
AATGTCGTGCGTGGTGGTTTGCTACATCATATTCGCTACATTCCCGATAAGCATATCTGCTTTGTCACTTTCATT
GATCCTACGTCAGCCGCGTCCTTTTACGCCCTGAGCAACCTGCAGGGCCTCATGATTCATAACCGTCGTCTGAAG
ATTGGCTGGGGTAAGCATTCCGGTCCTCTTCCGCCGGCCATTGCCCTGGCCGTGAGTGGCGGAGCTTCTCGAAAT
GTCTATGTCGGTAACCTCGATGAGACCTGGTCGGAGGAGCGCCTTCGCCAAGACTTCTCCGAGTATGGAGAGATC
GAGCTTGTCAACACGCTCCGTGAAAAGAGCTGCGCATTCGTCAATTTTACCAACATTGCCAATGCCATTAAGGCA
ATTGAAGGGATGCGGAACCGGGATGAATACAAGCGATTCAAGATCAATTTCGGGAAGGATCGCTGCGGTAATCCC
CCGCGTCAAGCCGGCAATGGAGGTCCGCAGGGTCGCAATGGGTCCGGGTTTGAGGGGCCTCAGTCACCTTCCCCA
GCTTTGAATGGCTTCCAGCAGAACCTAAGCCAATCTGGCTCGGGCTCTAGCCCGACTCATCCTGCCCTCTCTCCT
GCTCCTGGGTCTACGGGTTCTCAGAACGGCCAGCACCACAGGCATCCCCTGCAGACGGTCTCATCCCCATCTGGC
ATTCTAAATGTCGGTGCCAACAATCCGTTGACCATGTACCTCAACCAAATGTCCGCCCAGCAAGCCCAGGAGCAG
GAAAACCGGCTGAACGACCCCATGACCTTGGCTGGTCTTCAGTCCCAGCCTCAACCGCCGCAACAGCAGTCGCTC
TACAATGGCGCCAGCACTGGTGAGCTTTCCAATGGCAGCATCGAAGCCCCATTGCATCAGCACAAGCCGTCGACC
AACGGATTCTTGAACGTAACCAATGGATCTACGGGCCCCGGCCACCACGCTACCGCTAGCACCAGCAGCCTGAAT
GTACCACGGGCGCAGCATTCCCGGGCCGTGAGTTTGCCTTCGTTCTCTCAGGAGCCTTTCGGATCTGTTTCAAGC
CAGCCTCCCCGCTCCGGACTTGCTCATCAGCCGCAAAGCAGCTTTTCAAGCTTCACCTCTGCCCTAGGCGGTCTC
AGCCACGCCGGCTTCGGATTGGCCATCCAGAACGAGAGTTCGCTGCCCGGCTGGGCTGAGGAGGAGATTGGGGCC
AAATAA
Transcript >Ani_SJS100_1|g6252.t1
ATGATGGTTCAGTCGGAGCACAACTTCACTCTTGCTTTAGTCTCTCGGCCTCCTCAACCCGCAAAGCCCCCTAAA
GCAACTAAACCAGCGCAGACACGTCCTTATTGGCAGTCTTTCTGCTCCGTGCTCTTTGCCGTCTCTGTTTTCTTC
CTTATTTCCCCCCTTCTCTTTTCGGGGGTGATCTTCGGGCCCGGCCTTTTTTCCCTCCCTCCTGGCCATTCCTAC
CGTGTTGATTGCCTAGGGGACAATTGTTTTTCCCACCTCAACGCGGACAGCACCGGTTTCTCTCACGGAGCATAC
GCCTCCAACAATATTCCCCTGCAGGGCCTAACGGACCGGAACGCTCGTCGAGCCAATATCCCTGCCATTAATACC
TCTGCTCCCGTTTCGGACAACATGGCCGCCTCTGGCGCCGCGTTCGACATGAACTTCACTCCCCTACTACCCTCT
CAGTTGTTGCTTGGTAGCCCCTTCCAGCCCGGTACTCCCTCCGCGTTCGCCTCGCCTCAATTCGCCAATTTCGGT
GGCTTTCCTCAGACGAATGCCTCTTCACATGCCCAGAATCACCAGAGCCACCATCAGCTCGGAAGTCCGACCCAG
CCCTCGCAGAATGCTGGCCTATATTCTGGTATGATGTCGACGGATGGTATAGGTAACTCTCAAATGCTGGGGGCC
CCTCAATCTCCTGTTGGTGGTTTGGGGCCCATGGGCAACGCAGCGTACGGAAGTCCCGCTGCCTCGGTAACCCCT
GGCTTGCTTTCGGGTACGAGCCGAACCGTATACCTAGGCAATATTCCGGCAGAAACCTCCGCGGAAGAAATCTTG
AACCATGTTCGAAGCGGCCAAATTGAGTCGGTTCGTTTGCTTCCTGACAAGAACTGTGCTTTCATCTCCTTCCTG
GACAGCAACTCCGCAACCCACTTTCACTCGGATGCAATCTTGAAGAAGCTTGCAATCAAGGGAAATGATATCAAG
GTGGGTTGGGGCAAAGCATCTCAGGTGCCTACTTCGGTCGCTTTGGCTGTGCAGCAGTCCGGCGCATCACGGAAT
GTATACTTGGGGAACCTGTCGGAGGACATGACAGAGGAAGAACTGCGGGAGGAGCTAGGAAAATTCGGCCCCATT
GACACCGTCAAGATAGTCAAGGAGAAAGCGATTGGATTTGTCCACTTCTTGTCGATCAGCAATGCAATGAAGGCT
GTTTCTCAACTTCCTCAGGAGGCTAAGTGGCAGGCACCCAGGCGGGTATTCTACGGCAAAGATCGGTGCGCTTAT
GTTTCCAAAACTCAGCAGCAAAATGCAGCTCAGTTCTTGGGCATTGCCCCTGGTTATGCACACATTCTCAATTCG
GCGGACCGTGATTTGATCACCAACGCACTCGCTCAGCAATCTGTCGCCGCCGCGGCTGTGGCCACCACAGCCGGT
GGAGTCAACAACTTGGGCAACCGGACCATCTATTTGGGCAACATTCACCCCGAAACGACTATCGAGGAGATTTGC
AATGTCGTGCGTGGTGGTTTGCTACATCATATTCGCTACATTCCCGATAAGCATATCTGCTTTGTCACTTTCATT
GATCCTACGTCAGCCGCGTCCTTTTACGCCCTGAGCAACCTGCAGGGCCTCATGATTCATAACCGTCGTCTGAAG
ATTGGCTGGGGTAAGCATTCCGGTCCTCTTCCGCCGGCCATTGCCCTGGCCGTGAGTGGCGGAGCTTCTCGAAAT
GTCTATGTCGGTAACCTCGATGAGACCTGGTCGGAGGAGCGCCTTCGCCAAGACTTCTCCGAGTATGGAGAGATC
GAGCTTGTCAACACGCTCCGTGAAAAGAGCTGCGCATTCGTCAATTTTACCAACATTGCCAATGCCATTAAGGCA
ATTGAAGGGATGCGGAACCGGGATGAATACAAGCGATTCAAGATCAATTTCGGGAAGGATCGCTGCGGTAATCCC
CCGCGTCAAGCCGGCAATGGAGGTCCGCAGGGTCGCAATGGGTCCGGGTTTGAGGGGCCTCAGTCACCTTCCCCA
GCTTTGAATGGCTTCCAGCAGAACCTAAGCCAATCTGGCTCGGGCTCTAGCCCGACTCATCCTGCCCTCTCTCCT
GCTCCTGGGTCTACGGGTTCTCAGAACGGCCAGCACCACAGGCATCCCCTGCAGACGGTCTCATCCCCATCTGGC
ATTCTAAATGTCGGTGCCAACAATCCGTTGACCATGTACCTCAACCAAATGTCCGCCCAGCAAGCCCAGGAGCAG
GAAAACCGGCTGAACGACCCCATGACCTTGGCTGGTCTTCAGTCCCAGCCTCAACCGCCGCAACAGCAGTCGCTC
TACAATGGCGCCAGCACTGGTGAGCTTTCCAATGGCAGCATCGAAGCCCCATTGCATCAGCACAAGCCGTCGACC
AACGGATTCTTGAACGTAACCAATGGATCTACGGGCCCCGGCCACCACGCTACCGCTAGCACCAGCAGCCTGAAT
GTACCACGGGCGCAGCATTCCCGGGCCGTGAGTTTGCCTTCGTTCTCTCAGGAGCCTTTCGGATCTGTTTCAAGC
CAGCCTCCCCGCTCCGGACTTGCTCATCAGCCGCAAAGCAGCTTTTCAAGCTTCACCTCTGCCCTAGGCGGTCTC
AGCCACGCCGGCTTCGGATTGGCCATCCAGAACGAGAGTTCGCTGCCCGGCTGGGCTGAGGAGGAGATTGGGGCC
AAATAA
Gene >Ani_SJS100_1|g6252.t1
ATGATGGTTCAGGTTCACTATGGAGCATTGACTGGTTGAGGAATCCTTCTGCCGCAAATCCCCTTTCTTACCCAC
CTGCTTTTTTCCCCCCTTTGATACATCGATTACATACTTGCTGCTTTGTCTCGGCCCATTCCTTGCTTACCTGAC
CCTGTACCAGTCTGTCTCCTTTTGGCTAGTTCCTCGCGTTCTTCACTATCTGGGATTGTTGGTTCTCCCACAACA
GTTCCCTTGGTTCGAGTGTGACTTTTGTTTAATTACTCGGGTTGTTGATGATAATTTTCTGATAAGCTTTCTTTT
GTTTGATTACTGTTTACTTTTCAGTTTCATAAGATAGTTTGGGGAAAGCACAAGAGAAGAATTGGAGGGTGTTGT
TCTTGTTCTTTTTTCGCGGATATCATTCATCATTATCTTTATTTTCCTCTCACTATTTATCGCGCCTGTGTCCCT
CAAACACGCGCCCCCCTTTTTCCCCTACCAGGGGCCCTCTTTTTTCCTCACCCTTCTTTTCCGCTTAACTTGTAC
TGGCGGCTGTAATCTTTTAGTTTAATTGTCCTTTGCAATTACTTTCTCTCTTTCCCTTTGCTTTTCTTTACTCTT
CGTCTACTGTTATTACCACTTATCCCTTTTCAGTTGGATTGTCGGCGGCCTTTGGATACCTTCTTTGTCAACGTT
TGGGTCCGCTGCAACCTGGCACTCTGGCAGGTCTGGGGCGTTCTCCCTCTCCAGTACTCCGTACTCTCATTTGAC
AGGGCCATCTTTATTTCTATCATTATTTTTATCTTTTTATCTTTGTCCTTTCCATTCTAATCTCGGTTGGTTCTC
AGTCGGAGCACAACTTCACTCTTGCTTTAGTCTCTCGGCCTCCTCAACCCGCAAAGCCCCCTAAAGCAACTAAAC
CAGCGCAGGTTTGTCTCCGTTTCCACCAACTCAACCACTCATTGTCCATGCACATTCCAATTGACTAGCGGGATC
CCTTCTAGACACGTCCTTATTGGCAGTCTTTCTGCTCCGTGCTCTTTGCCGTCCTTTCTGCTCTTCTTTCTCATT
TTGATTACCCTCATTCTGGCCTCTCCAGGTCTCTGTTTTCTTCCTTATTTCCCCCCTTCTCTTTTCGGGGGTGAT
CTTCGGGCCCGGCCTTTTTTCCCTCCCTCCTGGCCATTCCTACCGTGTTGATTGCCTAGTACGTCTCCCCCTTGA
CTAAGTGATATCGTCTATTTCTCATCGACCACGAACTCATCTTATTCCGTTTCTCTTCATTAGGGGGACAATTGT
GTCCTACTCGCTCCCTCTCCTCGCCATGCAAACCTCCGATGCAAGCATTCCGAGTCGTCTGATCCCTTCCAAGTT
TTCCCACCTCAACGCGGACAGCACCGGTTTCTCTCACGGAGCATACGCCTCCAACAATATTCCCCTGCAGGGCCT
AACGGACCGGAACGCTCGTCGAGCCAATATCCCTGCCATTAATACCTCTGCTCCCGTTTCGGACAACATGGCCGC
CTCTGGCGCCGCGTTCGACATGAACTTCACTCCCCTACTACCCTCTCAGTTGTTGCTTGGTAGCCCCTTCCAGCC
CGGTACTCCCTCCGCGTTCGCCTCGCCTCAATTCGCCAATTTCGGTGGCTTTCCTCAGACGAATGCCTCTTCACA
TGCCCAGAATCACCAGAGCCACCATCAGCTCGGAAGTCCGACCCAGCCCTCGCAGAATGCTGGCCTATATTCTGG
TATGATGTCGACGGATGGTATAGGTAACTCTCAAATGCTGGGGGCCCCTCAATCTCCTGTTGGTGGTTTGGGGCC
CATGGGCAACGCAGCGTACGGAAGTCCCGCTGCCTCGGTAACCCCTGGCTTGCTTTCGGGTACGAGCCGAACCGT
ATACCTAGGCAATATTCCGGCAGAAACCTCCGCGGAAGAAATCTTGAACCATGTTCGAAGCGGCCAAATTGAGTC
GGTTCGTTTGCTTCCTGACAAGAACTGTGCTTTCATCTCCTTCCTGGACAGCAACTCCGCAACCCACTTTCACTC
GGATGCAATCTTGAAGAAGCTTGCAATCAAGGGAAATGATATCAAGGTGGGTTGGGGCAAAGCATCTCAGGTGCC
TACTTCGGTCGCTTTGGCTGTGCAGCAGTCCGGCGCATCACGGAATGTATACTTGGGGAACCTGTCGGAGGACAT
GACAGAGGAAGAACTGCGGGAGGAGCTAGGAAAATTCGGCCCCATTGACACCGTCAAGATAGTCAAGGAGAAAGC
GATTGGATTTGTCCACTTCTTGTCGATCAGCAATGCAATGAAGGCTGTTTCTCAACTTCCTCAGGAGGCTAAGTG
GCAGGCACCCAGGCGGGTATTCTACGGCAAAGATCGGTGCGCTTATGTTTCCAAAACTCAGCAGCAAAATGCAGC
TCAGTTCTTGGGCATTGCCCCTGGTTATGCACACATTCTCAATTCGGCGGACCGTGATTTGATCACCAACGCACT
CGCTCAGCAATCTGTCGCCGCCGCGGCTGTGGCCACCACAGCCGGTGGAGTCAACAACTTGGGCAACCGGACCAT
CTATTTGGGCAACATTCACCCCGAAACGACTATCGAGGAGATTTGCAATGTCGTGCGTGGTGGTTTGCTACATCA
TATTCGCTACATTCCCGATAAGCATATCTGCTTTGTCACTTTCATTGATCCTACGTCAGCCGCGTCCTTTTACGC
CCTGAGCAACCTGCAGGGCCTCATGATTCATAACCGTCGTCTGAAGATTGGCTGGGGTAAGCATTCCGGTCCTCT
TCCGCCGGCCATTGCCCTGGCCGTGAGTGGCGGAGCTTCTCGAAATGTCTATGTCGGTAACCTCGATGAGACCTG
GTCGGAGGAGCGCCTTCGCCAAGACTTCTCCGAGTATGGAGAGATCGAGCTTGTCAACACGCTCCGTGAAAAGAG
CTGCGCATTCGTCAATTTTACCAACATTGCCAATGCCATTAAGGCAATTGAAGGGATGCGGAACCGGGATGAATA
CAAGCGATTCAAGATCAATTTCGGGAAGGATCGCTGCGGTAATCCCCCGCGTCAAGCCGGCAATGGAGGTCCGCA
GGGTCGCAATGGGTCCGGGTTTGAGGGGCCTCAGTCACCTTCCCCAGCTTTGAATGGCTTCCAGCAGAACCTAAG
CCAATCTGGCTCGGGCTCTAGCCCGACTCATCCTGCCCTCTCTCCTGCTCCTGGGTCTACGGGTTCTCAGAACGG
CCAGCACCACAGGCATCCCCTGCAGACGGTCTCATCCCCATCTGGCATTCTAAATGTCGGTGCCAACAATCCGTT
GACCATGTACCTCAACCAAATGTCCGCCCAGCAAGCCCAGGAGCAGGAAAACCGGCTGAACGACCCCATGACCTT
GGCTGGTCTTCAGTCCCAGCCTCAACCGCCGCAACAGCAGTCGCTCTACAATGGCGCCAGCACTGGTGAGCTTTC
CAATGGCAGCATCGAAGCCCCATTGCATCAGCACAAGCCGTCGACCAACGGATTCTTGAACGTAACCAATGGATC
TACGGGCCCCGGCCACCACGCTACCGCTAGCACCAGCAGCCTGAATGTACCACGGGCGCAGCATTCCCGGGCCGT
GAGTTTGCCTTCGTTCTCTCAGGAGCCTTTCGGATCTGTTTCAAGCCAGCCTCCCCGCTCCGGACTTGCTCATCA
GCCGCAAAGCAGCTTTTCAAGCTTCACCTCTGCCCTAGGCGGTCTCAGCCACGCCGGCTTCGGATTGGCCATCCA
GAACGAGAGTTCGCTGCCCGGCTGGGCTGAGGAGGAGATTGGGGCCAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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