Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6247.t1
Gene name
Locationscaffold_038:48597..49908
Strand+
Gene length (bp)1311
Transcript length (bp)999
Coding sequence length (bp)999
Protein length (aa) 333

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12855 Ecl1 ECL1/2/3 zinc binding proteins 1.4E-44 62 273

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6247.t1
MTQSNNHHRRTPSGSNVPKLRNSRPALHRRGTSWVNHSISKLGSGQVTKQLELEDDRQPEMAASFLNFCAMCEKQ
ITVPDNSLLYCSESCRRKDSHKPLSASFSSNSSMSSSTTPPASPPMSPRMIVAPMTPTKGAARSSISRIPSEWND
SKTDQDPSEWKPVIPMGSGASSLASSEAWNYLSQFHRDDTMMPVRRPRFDHRSSTSLSALWSATGPVPPLMHTPS
TAASSVSSNGSDYMSYVHDSAYRPLPPRHKPQISGCSSATKGLDLVVPHVHVSVEDVPAVNISNDGSIFPASSAL
WDEKPIEKTPTLKTALGSPNSDIPARSLEETS*
Coding >Ani_SJS100_1|g6247.t1
ATGACTCAAAGCAATAACCATCATCGCCGCACTCCCTCGGGCTCCAATGTCCCTAAGCTGAGGAACTCTCGACCG
GCTTTACATCGGAGAGGCACATCCTGGGTCAACCACTCCATATCCAAACTAGGCTCTGGACAAGTCACTAAGCAG
TTGGAATTGGAGGACGACCGGCAGCCCGAGATGGCGGCTAGCTTTCTTAACTTTTGCGCCATGTGCGAAAAGCAG
ATAACAGTGCCTGACAATTCCCTTTTATATTGTAGTGAAAGTTGTCGCCGCAAAGACTCCCACAAACCGCTTTCG
GCTTCCTTCTCATCGAACTCCTCCATGTCTTCCTCAACAACTCCACCTGCCTCTCCTCCTATGTCTCCTCGAATG
ATTGTTGCACCCATGACTCCTACGAAAGGTGCCGCCAGATCCTCGATCTCCAGGATACCCAGCGAATGGAATGAT
TCCAAGACGGATCAGGATCCATCCGAATGGAAGCCAGTGATACCTATGGGGTCCGGTGCAAGTTCTCTGGCGTCA
TCGGAAGCTTGGAATTACCTGTCCCAGTTTCACCGTGATGACACTATGATGCCTGTTCGGCGCCCGCGGTTTGAT
CACCGCAGTTCGACAAGCCTGTCGGCACTCTGGAGTGCTACGGGGCCTGTTCCACCGCTGATGCACACGCCGTCC
ACAGCTGCATCGTCGGTGAGCAGCAATGGGTCGGACTATATGAGCTACGTGCATGACTCGGCCTATCGTCCACTG
CCCCCTCGGCACAAGCCCCAGATTTCTGGTTGCTCAAGCGCCACAAAAGGGCTCGACTTGGTGGTGCCCCACGTG
CATGTGAGTGTGGAAGATGTGCCCGCCGTTAATATCTCCAACGATGGGTCGATATTCCCCGCTAGCAGTGCTCTA
TGGGATGAGAAGCCCATTGAAAAGACGCCCACTCTGAAGACGGCCTTGGGTTCACCGAACTCTGACATACCTGCC
CGTTCCCTGGAGGAGACTTCATGA
Transcript >Ani_SJS100_1|g6247.t1
ATGACTCAAAGCAATAACCATCATCGCCGCACTCCCTCGGGCTCCAATGTCCCTAAGCTGAGGAACTCTCGACCG
GCTTTACATCGGAGAGGCACATCCTGGGTCAACCACTCCATATCCAAACTAGGCTCTGGACAAGTCACTAAGCAG
TTGGAATTGGAGGACGACCGGCAGCCCGAGATGGCGGCTAGCTTTCTTAACTTTTGCGCCATGTGCGAAAAGCAG
ATAACAGTGCCTGACAATTCCCTTTTATATTGTAGTGAAAGTTGTCGCCGCAAAGACTCCCACAAACCGCTTTCG
GCTTCCTTCTCATCGAACTCCTCCATGTCTTCCTCAACAACTCCACCTGCCTCTCCTCCTATGTCTCCTCGAATG
ATTGTTGCACCCATGACTCCTACGAAAGGTGCCGCCAGATCCTCGATCTCCAGGATACCCAGCGAATGGAATGAT
TCCAAGACGGATCAGGATCCATCCGAATGGAAGCCAGTGATACCTATGGGGTCCGGTGCAAGTTCTCTGGCGTCA
TCGGAAGCTTGGAATTACCTGTCCCAGTTTCACCGTGATGACACTATGATGCCTGTTCGGCGCCCGCGGTTTGAT
CACCGCAGTTCGACAAGCCTGTCGGCACTCTGGAGTGCTACGGGGCCTGTTCCACCGCTGATGCACACGCCGTCC
ACAGCTGCATCGTCGGTGAGCAGCAATGGGTCGGACTATATGAGCTACGTGCATGACTCGGCCTATCGTCCACTG
CCCCCTCGGCACAAGCCCCAGATTTCTGGTTGCTCAAGCGCCACAAAAGGGCTCGACTTGGTGGTGCCCCACGTG
CATGTGAGTGTGGAAGATGTGCCCGCCGTTAATATCTCCAACGATGGGTCGATATTCCCCGCTAGCAGTGCTCTA
TGGGATGAGAAGCCCATTGAAAAGACGCCCACTCTGAAGACGGCCTTGGGTTCACCGAACTCTGACATACCTGCC
CGTTCCCTGGAGGAGACTTCATGA
Gene >Ani_SJS100_1|g6247.t1
ATGACTCAAAGCAATAACCATCATCGCCGCACTCCCTCGGGCTCCAATGTCCCTAAGCTGAGGAACTCTCGACCG
GCTTTACATCGGAGAGGCACATCCTGGGTCAACCACTCCATATCCAAACTAGGCTCTGGACAAGTCACTAAGCAG
TTGGAATTGGAGGACGACCGGCAGCCCGAGATGGCGGCTAGCTTTCTTAACTTTTGGTATGTGTGTTATGCTATG
CTATCTCCTAGTATCCTTTGTCCTGCCTTCTCCCCAGCATGGTTGCTTTTGCCAATCCTCGCTCATCGCCGTTAA
CCTTGTAGCTTATTCCCCTTGCATATCAAATGATCGCTTATCTTCAGAATCGAAGCTAACTGATCTACAGCGCCA
TGTGCGAAAAGCAGATAACAGTGCCTGACAATTCCCTTTTATATTGTAGTGAAAGGTATGAGACTCCTTATCGCG
CCACAGCCTTGACATGCACAGCCTCCACTGTTGGTTTAAATTCCAACAAGTTCCCCTAGCCCTTCCGTTGTCTCG
TTGCTCTCTCGCTCTCTCCTTTCATTCATTTTCTTAACACATTATCTCTGCAGTTGTCGCCGCAAAGACTCCCAC
AAACCGCTTTCGGCTTCCTTCTCATCGAACTCCTCCATGTCTTCCTCAACAACTCCACCTGCCTCTCCTCCTATG
TCTCCTCGAATGATTGTTGCACCCATGACTCCTACGAAAGGTGCCGCCAGATCCTCGATCTCCAGGATACCCAGC
GAATGGAATGATTCCAAGACGGATCAGGATCCATCCGAATGGAAGCCAGTGATACCTATGGGGTCCGGTGCAAGT
TCTCTGGCGTCATCGGAAGCTTGGAATTACCTGTCCCAGTTTCACCGTGATGACACTATGATGCCTGTTCGGCGC
CCGCGGTTTGATCACCGCAGTTCGACAAGCCTGTCGGCACTCTGGAGTGCTACGGGGCCTGTTCCACCGCTGATG
CACACGCCGTCCACAGCTGCATCGTCGGTGAGCAGCAATGGGTCGGACTATATGAGCTACGTGCATGACTCGGCC
TATCGTCCACTGCCCCCTCGGCACAAGCCCCAGATTTCTGGTTGCTCAAGCGCCACAAAAGGGCTCGACTTGGTG
GTGCCCCACGTGCATGTGAGTGTGGAAGATGTGCCCGCCGTTAATATCTCCAACGATGGGTCGATATTCCCCGCT
AGCAGTGCTCTATGGGATGAGAAGCCCATTGAAAAGACGCCCACTCTGAAGACGGCCTTGGGTTCACCGAACTCT
GACATACCTGCCCGTTCCCTGGAGGAGACTTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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