Protein ID | Ani_SJS100_1|g6238.t1 |
Gene name | |
Location | scaffold_038:19565..22130 |
Strand | - |
Gene length (bp) | 2565 |
Transcript length (bp) | 2376 |
Coding sequence length (bp) | 2376 |
Protein length (aa) | 792 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11831 | Myb_Cef | pre-mRNA splicing factor component | 8.4E-60 | 419 | 639 |
PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 9.9E-11 | 7 | 52 |
PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 2.9E-09 | 58 | 102 |
PF13921 | Myb_DNA-bind_6 | Myb-like DNA-binding domain | 4.0E-13 | 9 | 69 |
PF13921 | Myb_DNA-bind_6 | Myb-like DNA-binding domain | 1.7E-07 | 61 | 102 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 47 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6238.t1 MPVVKGGVWTNIEDEVLRAAVSKYGLNQWARVSSLLARKTPKQCKARWVEWLDPGIRKVEWSREEDEKLLHLAKL MPTQWRTIAPIVGRTATQCLERYQKLLDEAEARENDELALEGPGAESAAPSADDVRRLRPGELDPDPESKPARPD TIDLDEDEKEMLSEARARLANTQGKKAKRKARERQLEESRRLAVLQKRRELKNAGINIKVVTRKQGEMDYNADIP FEKPAAPGFYDTMEEESRNERQREMFDPRKQQLANKRKGDQDDEAERKKRKNDKNSNSAAFAAAARAGQMQKIRE AEQSSKRRSLVLPAPQVSEGEMEDIIKMGMAGDRASKMAGDEEGARGLVGNYTGIVGGTPIRTPRAPPEEDHIAN EIRNIRALTETQSSLLGGENTPLHEGGSSTGFDGIAPRRQQIVTPNPMATPFRQANGVGATPMRGGVGPGATPLR TPRDHFALNQAEGGQLIGSTPRDIKMHENFMRQSIRSKLAALPKPKETEWELEELPSESTEPTAAAEYVEEDSAE RDRREAEARQRAAAAEFKRQSQVYQRSLPRPSVLDIDAMMERVSHITDPISSLVAKEAALLIAHDARKFPTPGAK VEGKARKLEQLDDNLMEQARAAIAAEAATSEKQQEWQENFDEQWTTKHCSALPGLSNYADDEEEDVYQQEQRMIA AFDNVQNSLLATAERGNKLEKKLALHYGGYQNRAKMLRTKIVEAHTALEKTADELDAFRTLQISEQSALSRRLEN LRDDVAFVMRREREAQDLYRTRKDELDELVAGTGGMVNGWH* |
Coding | >Ani_SJS100_1|g6238.t1 ATGCCTGTCGTCAAAGGAGGTGTCTGGACGAACATCGAGGATGAGGTGCTTCGCGCGGCGGTCTCGAAGTATGGT CTCAACCAGTGGGCGCGTGTTTCCTCGTTGTTAGCAAGAAAGACACCAAAGCAGTGCAAGGCGCGATGGGTGGAA TGGCTGGATCCCGGTATTCGCAAGGTTGAGTGGTCGAGGGAGGAAGATGAGAAGCTGTTGCATCTGGCCAAGTTG ATGCCGACACAGTGGCGTACAATCGCACCTATCGTGGGACGGACGGCAACACAATGCTTGGAACGCTATCAGAAG TTGCTGGATGAAGCGGAAGCGCGTGAGAATGATGAGCTTGCTTTGGAAGGTCCTGGCGCAGAGTCAGCTGCTCCC AGTGCTGACGACGTGCGACGGCTACGGCCCGGCGAATTGGACCCCGATCCGGAATCTAAGCCCGCTCGTCCTGAT ACCATTGACCTCGATGAAGATGAGAAGGAGATGCTGAGTGAAGCTCGCGCTCGTTTGGCGAACACACAAGGAAAG AAGGCGAAGCGGAAGGCCAGAGAACGACAATTGGAAGAATCGCGACGACTTGCAGTCCTTCAGAAACGACGTGAA CTCAAGAATGCCGGCATTAACATCAAGGTCGTCACTCGCAAGCAGGGTGAAATGGATTATAACGCCGATATCCCA TTCGAAAAGCCAGCAGCGCCCGGATTCTATGATACGATGGAGGAAGAATCCCGCAATGAGAGGCAACGGGAGATG TTTGATCCTCGCAAACAGCAGCTCGCCAACAAGCGAAAGGGAGATCAGGATGACGAGGCGGAGCGGAAAAAGAGG AAAAACGACAAGAACAGCAACTCCGCGGCGTTTGCTGCTGCTGCTCGGGCCGGCCAGATGCAGAAGATCCGAGAG GCGGAGCAAAGCAGCAAGCGGAGATCTCTTGTGCTCCCGGCTCCTCAGGTTAGCGAAGGTGAAATGGAGGACATT ATCAAGATGGGCATGGCAGGTGACAGAGCCAGTAAAATGGCAGGAGACGAAGAAGGGGCTCGTGGCCTGGTCGGA AACTACACTGGCATTGTCGGTGGAACTCCCATCAGAACACCCCGCGCCCCGCCAGAGGAAGATCACATCGCAAAC GAGATTCGCAACATCAGAGCTCTGACTGAGACCCAATCGTCGTTATTGGGAGGCGAGAACACTCCCCTACATGAG GGAGGGTCTTCTACTGGATTTGATGGAATTGCTCCGCGCCGTCAGCAGATTGTTACGCCTAACCCGATGGCGACA CCGTTCAGGCAAGCCAATGGCGTCGGTGCAACCCCTATGAGAGGTGGTGTTGGGCCTGGTGCCACTCCTTTGCGG ACCCCTCGGGATCACTTTGCTCTGAACCAGGCAGAAGGTGGGCAGCTGATTGGAAGCACCCCCCGAGATATCAAG ATGCACGAGAACTTCATGCGTCAAAGCATCCGCAGCAAGCTGGCGGCTCTGCCAAAGCCTAAAGAAACGGAATGG GAGCTGGAAGAGCTTCCTTCTGAATCCACGGAACCAACGGCAGCTGCTGAGTACGTGGAAGAGGACTCCGCTGAG CGCGATAGAAGGGAAGCTGAGGCCCGACAGCGCGCCGCAGCGGCCGAGTTCAAGCGTCAGTCACAGGTGTATCAG CGATCCTTACCTCGTCCGAGCGTGCTTGATATCGATGCGATGATGGAACGGGTATCTCACATCACTGATCCCATC TCCAGTCTTGTCGCAAAAGAAGCTGCGCTTCTCATTGCACACGACGCCCGCAAATTTCCTACCCCCGGTGCTAAG GTGGAGGGCAAAGCTCGCAAGCTGGAGCAATTAGATGACAACCTCATGGAGCAAGCCCGTGCGGCTATTGCAGCG GAAGCCGCCACATCCGAAAAGCAGCAGGAGTGGCAGGAAAACTTCGACGAGCAATGGACTACGAAGCATTGCAGC GCGCTACCAGGACTTTCTAACTATGCTGATGATGAAGAGGAGGATGTATACCAACAAGAACAGCGGATGATTGCA GCGTTTGACAATGTACAAAACTCTCTGCTGGCCACGGCAGAACGAGGCAACAAGCTGGAGAAGAAGCTCGCTTTA CATTACGGAGGCTATCAGAACCGGGCGAAAATGCTCCGGACCAAGATAGTGGAAGCCCACACAGCCCTAGAGAAG ACGGCGGATGAGCTGGATGCCTTCCGCACTCTACAGATTTCGGAACAGTCCGCTCTCTCGCGGAGACTTGAGAAT CTGAGAGATGATGTGGCATTCGTGATGCGCAGAGAGCGGGAAGCTCAAGACTTGTATAGAACCCGGAAGGACGAG CTTGACGAGCTCGTGGCAGGAACAGGGGGGATGGTTAATGGGTGGCATTAA |
Transcript | >Ani_SJS100_1|g6238.t1 ATGCCTGTCGTCAAAGGAGGTGTCTGGACGAACATCGAGGATGAGGTGCTTCGCGCGGCGGTCTCGAAGTATGGT CTCAACCAGTGGGCGCGTGTTTCCTCGTTGTTAGCAAGAAAGACACCAAAGCAGTGCAAGGCGCGATGGGTGGAA TGGCTGGATCCCGGTATTCGCAAGGTTGAGTGGTCGAGGGAGGAAGATGAGAAGCTGTTGCATCTGGCCAAGTTG ATGCCGACACAGTGGCGTACAATCGCACCTATCGTGGGACGGACGGCAACACAATGCTTGGAACGCTATCAGAAG TTGCTGGATGAAGCGGAAGCGCGTGAGAATGATGAGCTTGCTTTGGAAGGTCCTGGCGCAGAGTCAGCTGCTCCC AGTGCTGACGACGTGCGACGGCTACGGCCCGGCGAATTGGACCCCGATCCGGAATCTAAGCCCGCTCGTCCTGAT ACCATTGACCTCGATGAAGATGAGAAGGAGATGCTGAGTGAAGCTCGCGCTCGTTTGGCGAACACACAAGGAAAG AAGGCGAAGCGGAAGGCCAGAGAACGACAATTGGAAGAATCGCGACGACTTGCAGTCCTTCAGAAACGACGTGAA CTCAAGAATGCCGGCATTAACATCAAGGTCGTCACTCGCAAGCAGGGTGAAATGGATTATAACGCCGATATCCCA TTCGAAAAGCCAGCAGCGCCCGGATTCTATGATACGATGGAGGAAGAATCCCGCAATGAGAGGCAACGGGAGATG TTTGATCCTCGCAAACAGCAGCTCGCCAACAAGCGAAAGGGAGATCAGGATGACGAGGCGGAGCGGAAAAAGAGG AAAAACGACAAGAACAGCAACTCCGCGGCGTTTGCTGCTGCTGCTCGGGCCGGCCAGATGCAGAAGATCCGAGAG GCGGAGCAAAGCAGCAAGCGGAGATCTCTTGTGCTCCCGGCTCCTCAGGTTAGCGAAGGTGAAATGGAGGACATT ATCAAGATGGGCATGGCAGGTGACAGAGCCAGTAAAATGGCAGGAGACGAAGAAGGGGCTCGTGGCCTGGTCGGA AACTACACTGGCATTGTCGGTGGAACTCCCATCAGAACACCCCGCGCCCCGCCAGAGGAAGATCACATCGCAAAC GAGATTCGCAACATCAGAGCTCTGACTGAGACCCAATCGTCGTTATTGGGAGGCGAGAACACTCCCCTACATGAG GGAGGGTCTTCTACTGGATTTGATGGAATTGCTCCGCGCCGTCAGCAGATTGTTACGCCTAACCCGATGGCGACA CCGTTCAGGCAAGCCAATGGCGTCGGTGCAACCCCTATGAGAGGTGGTGTTGGGCCTGGTGCCACTCCTTTGCGG ACCCCTCGGGATCACTTTGCTCTGAACCAGGCAGAAGGTGGGCAGCTGATTGGAAGCACCCCCCGAGATATCAAG ATGCACGAGAACTTCATGCGTCAAAGCATCCGCAGCAAGCTGGCGGCTCTGCCAAAGCCTAAAGAAACGGAATGG GAGCTGGAAGAGCTTCCTTCTGAATCCACGGAACCAACGGCAGCTGCTGAGTACGTGGAAGAGGACTCCGCTGAG CGCGATAGAAGGGAAGCTGAGGCCCGACAGCGCGCCGCAGCGGCCGAGTTCAAGCGTCAGTCACAGGTGTATCAG CGATCCTTACCTCGTCCGAGCGTGCTTGATATCGATGCGATGATGGAACGGGTATCTCACATCACTGATCCCATC TCCAGTCTTGTCGCAAAAGAAGCTGCGCTTCTCATTGCACACGACGCCCGCAAATTTCCTACCCCCGGTGCTAAG GTGGAGGGCAAAGCTCGCAAGCTGGAGCAATTAGATGACAACCTCATGGAGCAAGCCCGTGCGGCTATTGCAGCG GAAGCCGCCACATCCGAAAAGCAGCAGGAGTGGCAGGAAAACTTCGACGAGCAATGGACTACGAAGCATTGCAGC GCGCTACCAGGACTTTCTAACTATGCTGATGATGAAGAGGAGGATGTATACCAACAAGAACAGCGGATGATTGCA GCGTTTGACAATGTACAAAACTCTCTGCTGGCCACGGCAGAACGAGGCAACAAGCTGGAGAAGAAGCTCGCTTTA CATTACGGAGGCTATCAGAACCGGGCGAAAATGCTCCGGACCAAGATAGTGGAAGCCCACACAGCCCTAGAGAAG ACGGCGGATGAGCTGGATGCCTTCCGCACTCTACAGATTTCGGAACAGTCCGCTCTCTCGCGGAGACTTGAGAAT CTGAGAGATGATGTGGCATTCGTGATGCGCAGAGAGCGGGAAGCTCAAGACTTGTATAGAACCCGGAAGGACGAG CTTGACGAGCTCGTGGCAGGAACAGGGGGGATGGTTAATGGGTGGCATTAA |
Gene | >Ani_SJS100_1|g6238.t1 ATGCCTGTCGTCAAAGGAGGTGTCTGGTAAGTGCATAGTTGTTATGCATGCTTCATTGCTGCATTTCACTAACTG TGGTTAGGACGAACATCGAGGATGAGGTGCTTCGCGCGGCGGTATGTTACAGCTAACCCTTGTCCGAAAGCTGAC TGGTCTGCGATTGGCGATACTAATGCTGCATATAATAGGTCTCGAAGTATGGTCTCAACCAGTGGGCGCGTGTTT CCTCGTTGTTAGCAAGAAAGACACCAAAGCAGTGCAAGGCGCGATGGGTGGAATGGCTGGATCCCGGTATTCGCA AGGTTGAGTGGTCGAGGGAGGAAGATGAGAAGCTGTTGCATCTGGCCAAGTTGATGCCGACACAGTGGCGTACAA TCGCACCTATCGTGGGACGGACGGCAACACAATGCTTGGAACGCTATCAGAAGTTGCTGGATGAAGCGGAAGCGC GTGAGAATGATGAGCTTGCTTTGGAAGGTCCTGGCGCAGAGTCAGCTGCTCCCAGTGCTGACGACGTGCGACGGC TACGGTACGACTCCGGACATGACACGCTTTGCTAGCTTCTTTTTCCATTTGCTGACACTACCTAGGCCCGGCGAA TTGGACCCCGATCCGGAATCTAAGCCCGCTCGTCCTGATACCATTGACCTCGATGAAGATGAGAAGGAGATGCTG AGTGAAGCTCGCGCTCGTTTGGCGAACACACAAGGAAAGAAGGCGAAGCGGAAGGCCAGAGAACGACAATTGGAA GAATCGCGACGACTTGCAGTCCTTCAGAAACGACGTGAACTCAAGAATGCCGGCATTAACATCAAGGTCGTCACT CGCAAGCAGGGTGAAATGGATTATAACGCCGATATCCCATTCGAAAAGCCAGCAGCGCCCGGATTCTATGATACG ATGGAGGAAGAATCCCGCAATGAGAGGCAACGGGAGATGTTTGATCCTCGCAAACAGCAGCTCGCCAACAAGCGA AAGGGAGATCAGGATGACGAGGCGGAGCGGAAAAAGAGGAAAAACGACAAGAACAGCAACTCCGCGGCGTTTGCT GCTGCTGCTCGGGCCGGCCAGATGCAGAAGATCCGAGAGGCGGAGCAAAGCAGCAAGCGGAGATCTCTTGTGCTC CCGGCTCCTCAGGTTAGCGAAGGTGAAATGGAGGACATTATCAAGATGGGCATGGCAGGTGACAGAGCCAGTAAA ATGGCAGGAGACGAAGAAGGGGCTCGTGGCCTGGTCGGAAACTACACTGGCATTGTCGGTGGAACTCCCATCAGA ACACCCCGCGCCCCGCCAGAGGAAGATCACATCGCAAACGAGATTCGCAACATCAGAGCTCTGACTGAGACCCAA TCGTCGTTATTGGGAGGCGAGAACACTCCCCTACATGAGGGAGGGTCTTCTACTGGATTTGATGGAATTGCTCCG CGCCGTCAGCAGATTGTTACGCCTAACCCGATGGCGACACCGTTCAGGCAAGCCAATGGCGTCGGTGCAACCCCT ATGAGAGGTGGTGTTGGGCCTGGTGCCACTCCTTTGCGGACCCCTCGGGATCACTTTGCTCTGAACCAGGCAGAA GGTGGGCAGCTGATTGGAAGCACCCCCCGAGATATCAAGATGCACGAGAACTTCATGCGTCAAAGCATCCGCAGC AAGCTGGCGGCTCTGCCAAAGCCTAAAGAAACGGAATGGGAGCTGGAAGAGCTTCCTTCTGAATCCACGGAACCA ACGGCAGCTGCTGAGTACGTGGAAGAGGACTCCGCTGAGCGCGATAGAAGGGAAGCTGAGGCCCGACAGCGCGCC GCAGCGGCCGAGTTCAAGCGTCAGTCACAGGTGTATCAGCGATCCTTACCTCGTCCGAGCGTGCTTGATATCGAT GCGATGATGGAACGGGTATCTCACATCACTGATCCCATCTCCAGTCTTGTCGCAAAAGAAGCTGCGCTTCTCATT GCACACGACGCCCGCAAATTTCCTACCCCCGGTGCTAAGGTGGAGGGCAAAGCTCGCAAGCTGGAGCAATTAGAT GACAACCTCATGGAGCAAGCCCGTGCGGCTATTGCAGCGGAAGCCGCCACATCCGAAAAGCAGCAGGAGTGGCAG GAAAACTTCGACGAGCAATGGACTACGAAGCATTGCAGCGCGCTACCAGGACTTTCTAACTATGCTGATGATGAA GAGGAGGATGTATACCAACAAGAACAGCGGATGATTGCAGCGTTTGACAATGTACAAAACTCTCTGCTGGCCACG GCAGAACGAGGCAACAAGCTGGAGAAGAAGCTCGCTTTACATTACGGAGGCTATCAGAACCGGGCGAAAATGCTC CGGACCAAGATAGTGGAAGCCCACACAGCCCTAGAGAAGACGGCGGATGAGCTGGATGCCTTCCGCACTCTACAG ATTTCGGAACAGTCCGCTCTCTCGCGGAGACTTGAGAATCTGAGAGATGATGTGGCATTCGTGATGCGCAGAGAG CGGGAAGCTCAAGACTTGTATAGAACCCGGAAGGACGAGCTTGACGAGCTCGTGGCAGGAACAGGGGGGATGGTT AATGGGTGGCATTAA |