Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6230.t1
Gene name
Locationscaffold_038:242..1531
Strand-
Gene length (bp)1289
Transcript length (bp)1035
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06101 Vps62 Vacuolar protein sorting-associated protein 62 2.9E-11 165 290

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6230.t1
MWTFLVQFFSTVLQFRLSMTKPGETIVAYDLTSTALPCYVMEYAPLVWLYSKETYMPSDIGQQLVHTTPMVNYTA
IKGAPSPLTLNNLAGLNKLGNTSVYLTSIEGIDATPEPAWFRGVKPDRNGKTKGAVSSTIITRDHGNGTVDAFYF
YFYAYNMGNTVLGMQFGDHVGDWEHNMIRFDNGVPQALWYSQHAGGEAFTFDATEKQGKRPIAYSANGSHAVYAV
PGTHDHAIPHLNLPFGFVMDYTDKGTLWDPIANAYAYSFDAASQTFQPYDRRYPVSWLEYNGQWGDDALPGGPEL
FGQAKYSAGPNGPKFKHLVRSTVCPDSPCVVLPFRIWDDEDGEM*
Coding >Ani_SJS100_1|g6230.t1
ATGTGGACCTTCCTAGTGCAGTTCTTCTCCACTGTGCTGCAGTTCCGCCTGTCAATGACCAAGCCCGGCGAGACA
ATAGTGGCCTATGATCTGACATCAACCGCTTTACCATGCTATGTAATGGAATATGCACCGCTCGTCTGGCTATAT
AGCAAGGAAACATACATGCCTTCAGATATCGGGCAGCAGCTGGTACATACGACACCAATGGTAAATTATACTGCA
ATCAAAGGAGCACCATCACCGTTAACACTCAACAACCTCGCGGGGCTCAACAAATTGGGAAATACCAGCGTTTAC
TTGACCTCAATAGAGGGCATTGATGCTACTCCAGAGCCAGCATGGTTCCGTGGAGTGAAGCCAGATAGGAATGGA
AAGACAAAAGGAGCTGTCTCATCGACAATCATCACCCGTGATCATGGAAATGGGACAGTGGATGCTTTCTACTTC
TACTTCTATGCGTACAATATGGGAAACACAGTATTGGGAATGCAGTTTGGAGACCACGTCGGTGACTGGGAGCAC
AACATGATCCGCTTTGATAACGGAGTTCCGCAAGCACTCTGGTACAGCCAGCACGCCGGAGGTGAAGCCTTTACC
TTCGACGCAACCGAGAAGCAGGGTAAAAGGCCGATCGCATACTCCGCTAATGGATCTCATGCTGTATACGCAGTA
CCTGGCACCCATGACCATGCCATCCCGCATCTCAACCTCCCCTTCGGATTTGTCATGGACTACACAGACAAAGGC
ACACTATGGGATCCCATCGCAAATGCATACGCATATAGCTTCGACGCAGCCAGCCAGACATTCCAGCCCTACGAC
CGCAGATATCCAGTAAGCTGGCTAGAGTACAATGGGCAGTGGGGAGACGACGCATTGCCGGGGGGACCGGAGCTC
TTTGGACAAGCGAAATACAGTGCGGGCCCGAACGGGCCTAAATTCAAACATCTTGTCAGGTCGACTGTCTGTCCG
GATAGTCCTTGTGTCGTGCTGCCTTTTCGTATTTGGGATGATGAGGATGGTGAGATGTAG
Transcript >Ani_SJS100_1|g6230.t1
ATGTGGACCTTCCTAGTGCAGTTCTTCTCCACTGTGCTGCAGTTCCGCCTGTCAATGACCAAGCCCGGCGAGACA
ATAGTGGCCTATGATCTGACATCAACCGCTTTACCATGCTATGTAATGGAATATGCACCGCTCGTCTGGCTATAT
AGCAAGGAAACATACATGCCTTCAGATATCGGGCAGCAGCTGGTACATACGACACCAATGGTAAATTATACTGCA
ATCAAAGGAGCACCATCACCGTTAACACTCAACAACCTCGCGGGGCTCAACAAATTGGGAAATACCAGCGTTTAC
TTGACCTCAATAGAGGGCATTGATGCTACTCCAGAGCCAGCATGGTTCCGTGGAGTGAAGCCAGATAGGAATGGA
AAGACAAAAGGAGCTGTCTCATCGACAATCATCACCCGTGATCATGGAAATGGGACAGTGGATGCTTTCTACTTC
TACTTCTATGCGTACAATATGGGAAACACAGTATTGGGAATGCAGTTTGGAGACCACGTCGGTGACTGGGAGCAC
AACATGATCCGCTTTGATAACGGAGTTCCGCAAGCACTCTGGTACAGCCAGCACGCCGGAGGTGAAGCCTTTACC
TTCGACGCAACCGAGAAGCAGGGTAAAAGGCCGATCGCATACTCCGCTAATGGATCTCATGCTGTATACGCAGTA
CCTGGCACCCATGACCATGCCATCCCGCATCTCAACCTCCCCTTCGGATTTGTCATGGACTACACAGACAAAGGC
ACACTATGGGATCCCATCGCAAATGCATACGCATATAGCTTCGACGCAGCCAGCCAGACATTCCAGCCCTACGAC
CGCAGATATCCAGTAAGCTGGCTAGAGTACAATGGGCAGTGGGGAGACGACGCATTGCCGGGGGGACCGGAGCTC
TTTGGACAAGCGAAATACAGTGCGGGCCCGAACGGGCCTAAATTCAAACATCTTGTCAGGTCGACTGTCTGTCCG
GATAGTCCTTGTGTCGTGCTGCCTTTTCGTATTTGGGATGATGAGGATGGTGAGATGTAG
Gene >Ani_SJS100_1|g6230.t1
ATGTGGACCTTCCTAGTGCAGTTCTTCTCCACTGTGCTGCAGTTCCGCCTGTCAATGACCAAGCCCGGCGAGACA
ATAGTGGCCTATGATCTGACATCAACCGCTTTACCATGCTATGTAATGGAATATGGTAAGCATATACTGGGATAT
TCATCTACACCACTATTCTAATCAACATCCAGCACCGCTCGTCTGGCTATATAGCAAGGAAACATACATGCCTTC
AGATATCGGGCAGCAGCTGGTACATACGACACCAATGGTAAATTATACTGCAATCAAAGGAGCACCATCACCGTT
AACACTCAACAACCTCGCGGGGCTCAACAAATTGGGAAATACCAGCGTTTACTTGACCTCAATAGAGGGCATTGA
TGCTACTCCAGAGCCAGCATGGTTCCGTGGAGTGAAGCCAGATAGGAATGGAAAGACAAAAGGAGCTGTCTCATC
GACAATCATCACCCGTGATCATGGAAATGGGACAGTGGATGCTTTCTACTTCTACTTCTATGCGTAAGTGATGAG
TAACACTGGAAGCTGGCTATAACCCATACTCAACATATGAAGGTACAATATGGGAAACACAGTATTGGGAATGCA
GTTTGGAGACCACGTCGGTGACTGGTGCGCAACACCTCTAACTCTCTCTACATACGTTCCCAACTGATATCATTA
GGGAGCACAACATGATCCGCTTTGATAACGGAGTTCCGCAAGCACTCTGGTACAGCCAGCACGCCGGAGGTGAAG
CCTTTACCTTCGACGCAACCGAGAAGCAGGGTAAAAGGCCGATCGCATACTCCGCTAATGGATCTCATGCTGTAT
ACGCAGTACCTGGGTATGTACAACCAGCCTCTAGAACATCGTAACATCGGCCTTCCCCAAAGATTGTGTATCACT
ATAATAACATATGATAACATTTGGGAATGCATAGCACCCATGACCATGCCATCCCGCATCTCAACCTCCCCTTCG
GATTTGTCATGGACTACACAGACAAAGGCACACTATGGGATCCCATCGCAAATGCATACGCATATAGCTTCGACG
CAGCCAGCCAGACATTCCAGCCCTACGACCGCAGATATCCAGTAAGCTGGCTAGAGTACAATGGGCAGTGGGGAG
ACGACGCATTGCCGGGGGGACCGGAGCTCTTTGGACAAGCGAAATACAGTGCGGGCCCGAACGGGCCTAAATTCA
AACATCTTGTCAGGTCGACTGTCTGTCCGGATAGTCCTTGTGTCGTGCTGCCTTTTCGTATTTGGGATGATGAGG
ATGGTGAGATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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