Protein ID | Ani_SJS100_1|g6206.t1 |
Gene name | |
Location | scaffold_037:224786..227474 |
Strand | + |
Gene length (bp) | 2688 |
Transcript length (bp) | 2418 |
Coding sequence length (bp) | 2418 |
Protein length (aa) | 806 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01476 | LysM | LysM domain | 7.2E-05 | 53 | 79 |
PF01476 | LysM | LysM domain | 1.4E-03 | 128 | 160 |
PF01476 | LysM | LysM domain | 1.7E-05 | 198 | 230 |
PF01476 | LysM | LysM domain | 1.4E-03 | 469 | 504 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6206.t1 MGTLPTWLSALLLLLWTAAAQSPAIDVAGTIADPNPHGPTMSGTPSDCNRWFTIKKGDTCYELEKAFGLTPQQFQ QWNPAVSHDCLVNFWPGYAYCVGIGPVAIPTSADTAPHAPTMTGIAANCNRWYTAQKGDNCYAVEKAFGLTPQQF QQWNPAVSLDCLVNFWAGYAYCVGVGPAANGPHGPTMPGIAPNCIQFYTAKKGDTCYAVEKAFGISPQQFQQWNP AVSLDCLVNSWPDYAYCVGVGPVAPTLTSTVTATATSASTSTTLTTSTTSTTSTTALPTSTTSTAWTTGTSTTST SLAPTTVFTTFTTTLTLTTTLTSNGQTTVIVTTTVTTTVSPSTTIGTFTTSTTALPPSTTSSSTTSTSSASTTVT SSTSDTSTTLTSPSTPTTPRTVTSTTPRSPSITPTPSTHPPTSPLPSTMVTTSVTYSTRNPITSYNQTITPIDTA WPPTKTHPGQPKNCDKWHLVAPGDTCRSIYQRHGNSITMDELLEWNPDLKADCDYPIAGYWVCVGIKRPALTIIY PTTNGTVPDPTPWTPRPFPTETAVYPPTKTQPGLAPSCSAFYEAQPSDTCDQILASNPMLNFPLLFEWNPALKAD CSGILPGYFYCIAAYNSTNLPSPPTVINQPYPIKAGTAKNCTAWYKKEDGDTCDLIVEMFGTFDKAQFVAWNPAV GVKCIGLENGYYYCVADPSTPKTRTRPVSTTVTFPTAHPRQPGVTKDCNKWWLVSVHDDCYDIIHFNGITMADLY TWNPALSGKRNCLEGLVPDMEICVGVSSMSTTTASSTVPGISGSTGLVTIVGGRD* |
Coding | >Ani_SJS100_1|g6206.t1 ATGGGTACTCTTCCTACATGGCTTTCTGCCCTGCTGCTACTGCTATGGACTGCAGCTGCTCAATCCCCTGCTATC GATGTCGCTGGCACTATAGCGGATCCCAATCCCCATGGCCCAACCATGTCAGGAACCCCATCCGATTGCAACCGA TGGTTCACCATCAAAAAGGGCGATACCTGCTATGAGTTGGAAAAGGCGTTTGGACTTACCCCCCAGCAATTCCAG CAGTGGAACCCTGCGGTCTCCCATGATTGTCTGGTCAACTTCTGGCCGGGCTACGCCTACTGCGTGGGAATTGGT CCAGTAGCAATCCCAACATCTGCAGACACTGCTCCTCATGCCCCAACCATGACTGGCATTGCAGCAAACTGTAAC CGGTGGTACACTGCCCAAAAGGGAGATAATTGTTATGCAGTAGAGAAAGCATTCGGGCTCACTCCGCAGCAGTTT CAGCAGTGGAATCCCGCTGTTTCTTTGGACTGTCTGGTCAACTTCTGGGCCGGATATGCTTATTGCGTGGGTGTT GGGCCGGCCGCAAATGGTCCGCATGGTCCTACTATGCCAGGCATTGCCCCAAATTGCATCCAGTTTTATACTGCC AAAAAGGGTGATACTTGCTATGCGGTCGAGAAGGCTTTTGGTATCAGCCCCCAACAATTTCAACAGTGGAATCCG GCTGTCTCTCTAGACTGCTTGGTCAATTCCTGGCCAGATTATGCGTACTGTGTGGGCGTTGGACCGGTTGCTCCG ACTTTGACATCGACTGTGACAGCGACAGCGACTTCAGCTTCGACTTCAACAACTTTAACCACTTCAACTACGTCC ACCACTTCGACAACTGCCCTTCCCACATCTACCACCTCTACTGCTTGGACTACTGGCACGTCGACCACTTCGACT AGTTTGGCACCTACGACAGTTTTCACTACTTTCACCACCACTCTCACTTTGACCACAACCTTGACTTCGAATGGT CAGACTACTGTAATAGTTACTACTACTGTGACTACGACCGTTAGCCCGTCTACAACTATTGGTACTTTCACTACA TCGACGACGGCCCTGCCTCCATCGACAACGTCTAGTTCCACCACTTCGACTTCGAGTGCTTCCACCACTGTGACT TCAAGTACTTCCGACACTTCAACTACGTTGACCAGTCCAAGCACCCCCACCACTCCCAGAACTGTAACCTCAACA ACCCCCCGTTCGCCCTCTATCACACCTACTCCTAGCACACACCCACCAACTAGCCCTCTCCCCAGCACAATGGTC ACGACCAGCGTGACCTACTCAACCCGCAATCCCATCACCTCATACAACCAGACCATAACGCCCATTGACACCGCA TGGCCTCCGACCAAAACCCACCCCGGGCAGCCCAAAAACTGTGACAAATGGCATCTAGTGGCGCCAGGAGACACC TGCAGATCAATTTACCAGCGTCACGGCAACAGCATTACCATGGACGAGCTACTGGAATGGAACCCCGACCTTAAA GCAGACTGCGACTACCCCATCGCCGGCTACTGGGTGTGCGTGGGTATCAAACGCCCCGCTCTCACCATAATCTAT CCCACCACCAATGGCACAGTCCCCGATCCCACTCCCTGGACGCCGCGTCCCTTTCCGACGGAGACGGCCGTTTAT CCACCCACCAAAACCCAACCTGGTCTCGCTCCAAGCTGTTCAGCCTTCTACGAAGCTCAGCCTTCCGACACCTGC GACCAAATCCTGGCCAGCAATCCCATGCTGAATTTCCCCCTCCTGTTCGAATGGAACCCAGCCCTAAAAGCAGAC TGCTCCGGTATCCTACCAGGCTACTTCTACTGCATCGCAGCCTACAACAGCACCAATCTCCCCTCCCCACCCACC GTCATTAACCAACCCTATCCAATAAAGGCAGGCACAGCCAAGAACTGCACAGCCTGGTACAAGAAGGAAGATGGT GACACGTGCGATTTGATCGTGGAGATGTTCGGCACGTTCGATAAGGCCCAGTTTGTGGCGTGGAATCCTGCTGTC GGTGTTAAATGCATTGGTTTGGAGAACGGCTACTACTACTGCGTCGCCGACCCCAGCACTCCCAAAACCCGCACA AGACCCGTATCCACCACCGTGACCTTCCCCACCGCTCATCCGCGCCAACCCGGCGTCACTAAGGATTGTAATAAG TGGTGGCTTGTGTCGGTTCACGATGACTGCTACGACATCATCCACTTCAACGGCATCACCATGGCAGATCTGTAT ACCTGGAATCCGGCCCTCTCGGGAAAGAGAAATTGTCTTGAGGGGTTGGTTCCTGATATGGAGATCTGTGTAGGG GTTTCGTCTATGTCTACTACCACTGCCTCGAGTACTGTTCCTGGTATATCTGGTAGCACTGGGTTGGTTACTATT GTGGGGGGAAGAGATTAA |
Transcript | >Ani_SJS100_1|g6206.t1 ATGGGTACTCTTCCTACATGGCTTTCTGCCCTGCTGCTACTGCTATGGACTGCAGCTGCTCAATCCCCTGCTATC GATGTCGCTGGCACTATAGCGGATCCCAATCCCCATGGCCCAACCATGTCAGGAACCCCATCCGATTGCAACCGA TGGTTCACCATCAAAAAGGGCGATACCTGCTATGAGTTGGAAAAGGCGTTTGGACTTACCCCCCAGCAATTCCAG CAGTGGAACCCTGCGGTCTCCCATGATTGTCTGGTCAACTTCTGGCCGGGCTACGCCTACTGCGTGGGAATTGGT CCAGTAGCAATCCCAACATCTGCAGACACTGCTCCTCATGCCCCAACCATGACTGGCATTGCAGCAAACTGTAAC CGGTGGTACACTGCCCAAAAGGGAGATAATTGTTATGCAGTAGAGAAAGCATTCGGGCTCACTCCGCAGCAGTTT CAGCAGTGGAATCCCGCTGTTTCTTTGGACTGTCTGGTCAACTTCTGGGCCGGATATGCTTATTGCGTGGGTGTT GGGCCGGCCGCAAATGGTCCGCATGGTCCTACTATGCCAGGCATTGCCCCAAATTGCATCCAGTTTTATACTGCC AAAAAGGGTGATACTTGCTATGCGGTCGAGAAGGCTTTTGGTATCAGCCCCCAACAATTTCAACAGTGGAATCCG GCTGTCTCTCTAGACTGCTTGGTCAATTCCTGGCCAGATTATGCGTACTGTGTGGGCGTTGGACCGGTTGCTCCG ACTTTGACATCGACTGTGACAGCGACAGCGACTTCAGCTTCGACTTCAACAACTTTAACCACTTCAACTACGTCC ACCACTTCGACAACTGCCCTTCCCACATCTACCACCTCTACTGCTTGGACTACTGGCACGTCGACCACTTCGACT AGTTTGGCACCTACGACAGTTTTCACTACTTTCACCACCACTCTCACTTTGACCACAACCTTGACTTCGAATGGT CAGACTACTGTAATAGTTACTACTACTGTGACTACGACCGTTAGCCCGTCTACAACTATTGGTACTTTCACTACA TCGACGACGGCCCTGCCTCCATCGACAACGTCTAGTTCCACCACTTCGACTTCGAGTGCTTCCACCACTGTGACT TCAAGTACTTCCGACACTTCAACTACGTTGACCAGTCCAAGCACCCCCACCACTCCCAGAACTGTAACCTCAACA ACCCCCCGTTCGCCCTCTATCACACCTACTCCTAGCACACACCCACCAACTAGCCCTCTCCCCAGCACAATGGTC ACGACCAGCGTGACCTACTCAACCCGCAATCCCATCACCTCATACAACCAGACCATAACGCCCATTGACACCGCA TGGCCTCCGACCAAAACCCACCCCGGGCAGCCCAAAAACTGTGACAAATGGCATCTAGTGGCGCCAGGAGACACC TGCAGATCAATTTACCAGCGTCACGGCAACAGCATTACCATGGACGAGCTACTGGAATGGAACCCCGACCTTAAA GCAGACTGCGACTACCCCATCGCCGGCTACTGGGTGTGCGTGGGTATCAAACGCCCCGCTCTCACCATAATCTAT CCCACCACCAATGGCACAGTCCCCGATCCCACTCCCTGGACGCCGCGTCCCTTTCCGACGGAGACGGCCGTTTAT CCACCCACCAAAACCCAACCTGGTCTCGCTCCAAGCTGTTCAGCCTTCTACGAAGCTCAGCCTTCCGACACCTGC GACCAAATCCTGGCCAGCAATCCCATGCTGAATTTCCCCCTCCTGTTCGAATGGAACCCAGCCCTAAAAGCAGAC TGCTCCGGTATCCTACCAGGCTACTTCTACTGCATCGCAGCCTACAACAGCACCAATCTCCCCTCCCCACCCACC GTCATTAACCAACCCTATCCAATAAAGGCAGGCACAGCCAAGAACTGCACAGCCTGGTACAAGAAGGAAGATGGT GACACGTGCGATTTGATCGTGGAGATGTTCGGCACGTTCGATAAGGCCCAGTTTGTGGCGTGGAATCCTGCTGTC GGTGTTAAATGCATTGGTTTGGAGAACGGCTACTACTACTGCGTCGCCGACCCCAGCACTCCCAAAACCCGCACA AGACCCGTATCCACCACCGTGACCTTCCCCACCGCTCATCCGCGCCAACCCGGCGTCACTAAGGATTGTAATAAG TGGTGGCTTGTGTCGGTTCACGATGACTGCTACGACATCATCCACTTCAACGGCATCACCATGGCAGATCTGTAT ACCTGGAATCCGGCCCTCTCGGGAAAGAGAAATTGTCTTGAGGGGTTGGTTCCTGATATGGAGATCTGTGTAGGG GTTTCGTCTATGTCTACTACCACTGCCTCGAGTACTGTTCCTGGTATATCTGGTAGCACTGGGTTGGTTACTATT GTGGGGGGAAGAGATTAA |
Gene | >Ani_SJS100_1|g6206.t1 ATGGGTACTCTTCCTACATGGCTTTCTGCCCTGCTGCTACTGCTATGGACTGCAGCTGCTCAATCCCCTGCTATC GATGTCGCTGGCACTATAGCGGATCCCAATCCCCATGGCCCAACCATGTCAGGAACCCCATCCGATTGCAACCGA TGGTTCACCATCAAAAAGGGCGATACCTGCTATGAGTTGGAAAAGGCGTTTGGACTTACCCCCCAGCAATTCCAG CAGTGGAACCCTGCGGTCTCCCATGATTGTCTGGTCAACTTCTGGCCGGGCTACGCCTACTGCGTGGGAATTGGT CCAGTAGCAATCCCAACATCTGCAGACACTGCTCCTCATGCCCCAACCATGACTGGCATTGCAGCAAACTGTAAC CGGTGGTACACTGCCCAAAAGGGAGATAATTGTTATGCAGTAGAGAAAGCATTCGGGCTCACTCCGCAGCAGTTT CAGCAGTGGAATCCCGCTGTTTCTTTGGACTGTCTGGTCAACTTCTGGGCCGGATATGCTTATTGCGTGGGTGTT GGGCCGGCCGCAAATGGTCCGCATGGTCCTACTATGCCAGGCATTGCCCCAAATTGCATCCAGTTTTATACTGCC AAAAAGGGTGATACTTGCTATGCGGTCGAGAAGGCTTTTGGTATCAGCCCCCAACAATTTCAACAGTGGAATCCG GCTGTCTCTCTAGACTGCTTGGTCAATTCCTGGCCAGATTATGCGTACTGTGTGGGCGTTGGACCGGTTGCTCCG ACTTTGACATCGACTGTGACAGCGACAGCGACTTCAGCTTCGACTTCAACAACTTTAACCACTTCAACTACGTCC ACCACTTCGACAACTGCCCTTCCCACATCTACCACCTCTACTGCTTGGACTACTGGCACGTCGACCACTTCGACT AGTTTGGCACCTACGACAGTTTTCACTACTTTCACCACCACTCTCACTTTGACCACAACCTTGACTTCGAATGGT CAGACTACTGTAATAGTTACTACTACTGTGACTACGACCGTTAGCCCGTCTACAACTATTGGTACTTTCACTACA TCGACGACGGCCCTGCCTCCATCGACAACGTCTAGTTCCACCACTTCGACTTCGAGTGCTTCCACCACTGTGACT TCAAGTACTTCCGACACTTCAACTACGTTGACCAGTCCAAGCACCCCCACCACTCCCAGAACTGTAACCTCAACA ACCCCCCGTTCGCCCTCTATCACACCTACTCCTAGCACACACCCACCAACTAGCCCTCTCCCCAGCACAATGGTC ACGACCAGCGTGACCTACTCAACCCGCAATCCCATCACCTCATACAACCAGACCATAACGCCCATTGACACCGCA TGGCCTCCGACCAAAACCCACCCCGGGCAGCCCAAAAACTGTGACAAATGGCATCTAGTGGCGCCAGGAGACACC TGCAGATCAATTTACCAGCGTCACGGCAACAGCATTACCATGGACGAGCTGTAAGTACCCATCCTTCCTACCCGA GTCAGTCCTATCTAACATACAAAATCCCAGACTGGAATGGAACCCCGACCTTAAAGCAGACTGCGACTACCCCAT CGCCGGCTACTGGGTGTGCGTGGGTATCAAACGCCCCGCTCTCACCATAATCTATCCCACCACCAATGGCACAGT CCCCGATCCCACTCCCTGGACGCCGCGTCCCTTTCCGACGGAGACGGCCGTTTATCCACCCACCAAAACCCAACC TGGTCTCGCTCCAAGCTGTTCAGCCTTCTACGAAGCTCAGCCTGTAAGTATTATTTACCACACACATACATACCT ACATTACTGACGAACCCAGTCCGACACCTGCGACCAAATCCTGGCCAGCAATCCCATGCTGAATTTCCCCCTCCT GTTCGAATGGAACCCAGCCCTAAAAGCAGACTGCTCCGGTATCCTACCAGGCTACTTCTACTGCATCGCAGCCTA CAACAGCACCAATCTCCCCTCCCCACCCACCGTCATTAACCAACCCTATCCAATAAAGGCAGGCACAGCCAAGAA CTGCACAGCCTGGTACAAGAAGGAAGATGGTGACACGTGCGATTTGATCGTGGAGATGTTCGGCACGTTCGATAA GGCCCAGTTTGTGGCGTGGAATCCTGCTGTCGGTGTTAAATGCATTGGTTTGGAGGTACGTATTTTGCCTTCTCC CCAATATCCTTCTTCCTTTCTTTTTTTTCTTAAAGAGATTCACAATCTAACCCAACTCGCGGTATGATATAGAAC GGCTACTACTACTGCGTCGCCGACCCCAGCACTCCCAAAACCCGCACAAGACCCGTATCCACCACCGTGACCTTC CCCACCGCTCATCCGCGCCAACCCGGCGTCACTAAGGATTGTAATAAGTGGTGGCTTGTGTCGGTGTGAGTAACC CTCTACCTATACCCTCTTATCCTCAATCTCAAATCACGCTATGACGAAACTAATGATAATAGTCACGATGACTGC TACGACATCATCCACTTCAACGGCATCACCATGGCAGATCTGTATACCTGGAATCCGGCCCTCTCGGGAAAGAGA AATTGTCTTGAGGGGTTGGTTCCTGATATGGAGATCTGTGTAGGGGTTTCGTCTATGTCTACTACCACTGCCTCG AGTACTGTTCCTGGTATATCTGGTAGCACTGGGTTGGTTACTATTGTGGGGGGAAGAGATTAA |