Protein ID | Ani_SJS100_1|g6198.t1 |
Gene name | |
Location | scaffold_037:205366..206895 |
Strand | + |
Gene length (bp) | 1529 |
Transcript length (bp) | 1377 |
Coding sequence length (bp) | 1377 |
Protein length (aa) | 459 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16561 | AMPK1_CBM | Glycogen recognition site of AMP-activated protein kinase | 7.9E-28 | 217 | 303 |
PF04739 | AMPKBI | 5'-AMP-activated protein kinase beta subunit, interaction domain | 1.3E-24 | 383 | 452 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6198.t1 MGNNPSKPPAGDAQSPSAPSAAAGDKKVARRSSIHTPSGTTKASAADPSATRETATGHPTSQAQPSVQQRLQSRN VTDLPTRNLDRPDRQVPKKPDTRSKDIPAPDPSNPVQVPGSRAAAKRDPVAPSGPPPHAYYSASVHLQRPPRMPL PIGDATATPGSPIIGPEDSYMGSVAPDHLLDEHHQSRQSAVSGATVDDDEALDELQPYTPSGVGRAVPTLIEWTA PGDKVYVTGTFVNWEKKFRLHRSENNPGVLSTRLNLRPGTHHLKFIVNGEMRASDNLPTAVDFTNHLVNYIEISA DDVNRSRRESDKVPDGVRPPQVIPGPVGNDQVGSTVEEQSDREEPEEIPLGDFRGVIPQFLLDLDREEETPEYQQ AVNIVGDAPTPPSLPLFLGKSILNGTTPMKDDSSVLNYPNHTVLNHLATSSIKNGVLATSVTTRYKRKYVTTILY KPTGDITD* |
Coding | >Ani_SJS100_1|g6198.t1 ATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGCCGCGGCGGGGGAC AAGAAAGTAGCTCGCCGGTCATCGATTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCC ACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCTACAATCCCGCAAT GTCACGGATCTACCGACGCGGAATCTAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAA GACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAAACGTGACCCTGTA GCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTG CCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATATGGGATCGGTTGCA CCCGACCATTTGTTGGATGAACACCACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAA GCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGATAGAGTGGACTGCC CCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATCGGAGTGAGAAC AACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACCCATCATTTGAAATTCATTGTCAATGGTGAA ATGCGCGCTTCAGATAACCTCCCCACGGCAGTCGATTTCACGAACCACCTTGTCAACTATATTGAAATCAGTGCT GATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGATGGCGTTCGACCCCCGCAGGTCATTCCTGGG CCGGTCGGGAACGATCAAGTGGGGTCCACCGTGGAGGAACAGTCAGACAGAGAGGAGCCAGAGGAGATCCCGCTT GGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGACCGCGAGGAAGAAACACCAGAGTACCAGCAA GCTGTGAATATCGTTGGGGATGCGCCTACACCGCCGAGTCTTCCGCTGTTCCTCGGCAAATCAATCTTGAACGGC ACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAACCACACCGTCCTAAATCATCTTGCTACTAGC AGTATCAAGAATGGTGTGCTTGCCACCAGCGTAACGACTCGCTACAAACGGAAGTACGTCACAACGATATTGTAC AAACCGACAGGTGATATTACGGATTAG |
Transcript | >Ani_SJS100_1|g6198.t1 ATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGCCGCGGCGGGGGAC AAGAAAGTAGCTCGCCGGTCATCGATTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCC ACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCTACAATCCCGCAAT GTCACGGATCTACCGACGCGGAATCTAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAA GACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAAACGTGACCCTGTA GCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTG CCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATATGGGATCGGTTGCA CCCGACCATTTGTTGGATGAACACCACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAA GCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGATAGAGTGGACTGCC CCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATCGGAGTGAGAAC AACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACCCATCATTTGAAATTCATTGTCAATGGTGAA ATGCGCGCTTCAGATAACCTCCCCACGGCAGTCGATTTCACGAACCACCTTGTCAACTATATTGAAATCAGTGCT GATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGATGGCGTTCGACCCCCGCAGGTCATTCCTGGG CCGGTCGGGAACGATCAAGTGGGGTCCACCGTGGAGGAACAGTCAGACAGAGAGGAGCCAGAGGAGATCCCGCTT GGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGACCGCGAGGAAGAAACACCAGAGTACCAGCAA GCTGTGAATATCGTTGGGGATGCGCCTACACCGCCGAGTCTTCCGCTGTTCCTCGGCAAATCAATCTTGAACGGC ACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAACCACACCGTCCTAAATCATCTTGCTACTAGC AGTATCAAGAATGGTGTGCTTGCCACCAGCGTAACGACTCGCTACAAACGGAAGTACGTCACAACGATATTGTAC AAACCGACAGGTGATATTACGGATTAG |
Gene | >Ani_SJS100_1|g6198.t1 ATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGCCGCGGCGGGGGAC AAGAAAGTAGCTCGCCGGTCATCGATTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCC ACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCTACAATCCCGCAAT GTCACGGATCTACCGACGCGGAATCTAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAA GACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAAACGTGACCCTGTA GCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTG CCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATATGGGATCGGTTGCA CCCGACCATTTGTTGGATGAACACCACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAA GCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGATAGAGTGGACTGCC CCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATCGGAGGTATGCC ATGCTGCCTCATCCACTGTCTCATATGTCCAGGCGCATTACTTGTTATCTGGGCTGTTGTACGTTACTAGAACTA ACTGGAACCTTGCATAAACAGTGAGAACAACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACCCA TCATTTGAAATTCATTGTCAATGGTGAAATGCGCGCTTCAGATAACCTCCCCACGGCAGTCGATTTCACGAACCA CCTTGTCAACTATATTGAAATCAGTGCTGATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGATGG CGTTCGACCCCCGCAGGTCATTCCTGGGCCGGTCGGGAACGATCAAGTGGGGTCCACCGTGGAGGAACAGTCAGA CAGAGAGGAGCCAGAGGAGATCCCGCTTGGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGACCG CGAGGAAGAAACACCAGAGTACCAGCAAGCTGTGAATATCGTTGGGGATGCGCCTACACCGCCGAGTCTTCCGCT GTTCCTCGGCAAATCAATCTTGAACGGCACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAACCA CACCGTCCTAAATCATCTTGCTACTAGCAGTATCAAGAATGGTGTGCTTGCCACCAGCGTAACGACTCGCTACAA ACGGAAGGTAAGTTGGCACCTCTTTGTCACGGACTCACAGAACTAATGGTATGTAGTACGTCACAACGATATTGT ACAAACCGACAGGTGATATTACGGATTAG |