Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6198.t1
Gene name
Locationscaffold_037:205366..206895
Strand+
Gene length (bp)1529
Transcript length (bp)1377
Coding sequence length (bp)1377
Protein length (aa) 459

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16561 AMPK1_CBM Glycogen recognition site of AMP-activated protein kinase 7.9E-28 217 303
PF04739 AMPKBI 5'-AMP-activated protein kinase beta subunit, interaction domain 1.3E-24 383 452

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6198.t1
MGNNPSKPPAGDAQSPSAPSAAAGDKKVARRSSIHTPSGTTKASAADPSATRETATGHPTSQAQPSVQQRLQSRN
VTDLPTRNLDRPDRQVPKKPDTRSKDIPAPDPSNPVQVPGSRAAAKRDPVAPSGPPPHAYYSASVHLQRPPRMPL
PIGDATATPGSPIIGPEDSYMGSVAPDHLLDEHHQSRQSAVSGATVDDDEALDELQPYTPSGVGRAVPTLIEWTA
PGDKVYVTGTFVNWEKKFRLHRSENNPGVLSTRLNLRPGTHHLKFIVNGEMRASDNLPTAVDFTNHLVNYIEISA
DDVNRSRRESDKVPDGVRPPQVIPGPVGNDQVGSTVEEQSDREEPEEIPLGDFRGVIPQFLLDLDREEETPEYQQ
AVNIVGDAPTPPSLPLFLGKSILNGTTPMKDDSSVLNYPNHTVLNHLATSSIKNGVLATSVTTRYKRKYVTTILY
KPTGDITD*
Coding >Ani_SJS100_1|g6198.t1
ATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGCCGCGGCGGGGGAC
AAGAAAGTAGCTCGCCGGTCATCGATTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCC
ACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCTACAATCCCGCAAT
GTCACGGATCTACCGACGCGGAATCTAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAA
GACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAAACGTGACCCTGTA
GCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTG
CCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATATGGGATCGGTTGCA
CCCGACCATTTGTTGGATGAACACCACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAA
GCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGATAGAGTGGACTGCC
CCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATCGGAGTGAGAAC
AACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACCCATCATTTGAAATTCATTGTCAATGGTGAA
ATGCGCGCTTCAGATAACCTCCCCACGGCAGTCGATTTCACGAACCACCTTGTCAACTATATTGAAATCAGTGCT
GATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGATGGCGTTCGACCCCCGCAGGTCATTCCTGGG
CCGGTCGGGAACGATCAAGTGGGGTCCACCGTGGAGGAACAGTCAGACAGAGAGGAGCCAGAGGAGATCCCGCTT
GGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGACCGCGAGGAAGAAACACCAGAGTACCAGCAA
GCTGTGAATATCGTTGGGGATGCGCCTACACCGCCGAGTCTTCCGCTGTTCCTCGGCAAATCAATCTTGAACGGC
ACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAACCACACCGTCCTAAATCATCTTGCTACTAGC
AGTATCAAGAATGGTGTGCTTGCCACCAGCGTAACGACTCGCTACAAACGGAAGTACGTCACAACGATATTGTAC
AAACCGACAGGTGATATTACGGATTAG
Transcript >Ani_SJS100_1|g6198.t1
ATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGCCGCGGCGGGGGAC
AAGAAAGTAGCTCGCCGGTCATCGATTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCC
ACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCTACAATCCCGCAAT
GTCACGGATCTACCGACGCGGAATCTAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAA
GACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAAACGTGACCCTGTA
GCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTG
CCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATATGGGATCGGTTGCA
CCCGACCATTTGTTGGATGAACACCACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAA
GCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGATAGAGTGGACTGCC
CCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATCGGAGTGAGAAC
AACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACCCATCATTTGAAATTCATTGTCAATGGTGAA
ATGCGCGCTTCAGATAACCTCCCCACGGCAGTCGATTTCACGAACCACCTTGTCAACTATATTGAAATCAGTGCT
GATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGATGGCGTTCGACCCCCGCAGGTCATTCCTGGG
CCGGTCGGGAACGATCAAGTGGGGTCCACCGTGGAGGAACAGTCAGACAGAGAGGAGCCAGAGGAGATCCCGCTT
GGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGACCGCGAGGAAGAAACACCAGAGTACCAGCAA
GCTGTGAATATCGTTGGGGATGCGCCTACACCGCCGAGTCTTCCGCTGTTCCTCGGCAAATCAATCTTGAACGGC
ACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAACCACACCGTCCTAAATCATCTTGCTACTAGC
AGTATCAAGAATGGTGTGCTTGCCACCAGCGTAACGACTCGCTACAAACGGAAGTACGTCACAACGATATTGTAC
AAACCGACAGGTGATATTACGGATTAG
Gene >Ani_SJS100_1|g6198.t1
ATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGCCGCGGCGGGGGAC
AAGAAAGTAGCTCGCCGGTCATCGATTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCC
ACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCTACAATCCCGCAAT
GTCACGGATCTACCGACGCGGAATCTAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAA
GACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAAACGTGACCCTGTA
GCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTG
CCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATATGGGATCGGTTGCA
CCCGACCATTTGTTGGATGAACACCACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAA
GCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGATAGAGTGGACTGCC
CCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATCGGAGGTATGCC
ATGCTGCCTCATCCACTGTCTCATATGTCCAGGCGCATTACTTGTTATCTGGGCTGTTGTACGTTACTAGAACTA
ACTGGAACCTTGCATAAACAGTGAGAACAACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACCCA
TCATTTGAAATTCATTGTCAATGGTGAAATGCGCGCTTCAGATAACCTCCCCACGGCAGTCGATTTCACGAACCA
CCTTGTCAACTATATTGAAATCAGTGCTGATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGATGG
CGTTCGACCCCCGCAGGTCATTCCTGGGCCGGTCGGGAACGATCAAGTGGGGTCCACCGTGGAGGAACAGTCAGA
CAGAGAGGAGCCAGAGGAGATCCCGCTTGGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGACCG
CGAGGAAGAAACACCAGAGTACCAGCAAGCTGTGAATATCGTTGGGGATGCGCCTACACCGCCGAGTCTTCCGCT
GTTCCTCGGCAAATCAATCTTGAACGGCACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAACCA
CACCGTCCTAAATCATCTTGCTACTAGCAGTATCAAGAATGGTGTGCTTGCCACCAGCGTAACGACTCGCTACAA
ACGGAAGGTAAGTTGGCACCTCTTTGTCACGGACTCACAGAACTAATGGTATGTAGTACGTCACAACGATATTGT
ACAAACCGACAGGTGATATTACGGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail