© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6191.t1 |
| Gene name | |
| Location | scaffold_037:190613..191531 |
| Strand | + |
| Gene length (bp) | 918 |
| Transcript length (bp) | 918 |
| Coding sequence length (bp) | 918 |
| Protein length (aa) | 306 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06682 | SARAF | SOCE-associated regulatory factor of calcium homoeostasis | 2.2E-97 | 11 | 305 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:2001256 | regulation of store-operated calcium entry | Yes |
| GO:0030176 | integral component of endoplasmic reticulum membrane | Yes |
| GO:0032879 | regulation of localization | No |
| GO:0051049 | regulation of transport | No |
| GO:0031301 | integral component of organelle membrane | No |
| GO:0043269 | regulation of ion transport | No |
| GO:0031227 | intrinsic component of endoplasmic reticulum membrane | No |
| GO:0051924 | regulation of calcium ion transport | No |
| GO:0031300 | intrinsic component of organelle membrane | No |
| GO:0065007 | biological regulation | No |
| GO:0016021 | integral component of membrane | No |
| GO:0010959 | regulation of metal ion transport | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0050789 | regulation of biological process | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 22 | 0.999725 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 165 | 187 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 6466 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6191.t1 MYTLLIIQLLISLLVFPNAALSDRPPGKDAILLSRVRSLTLRGNRLTTSRRVSPIPQLKCTGPSKRICNMYEIDT MRCTNEGYDYDEEDVQWTCTASLPREFKLGATDVICEGYRNADDKWILKGSCGVEYRLLLTEAGEEKFGHLRNER SSSSNDELGPGGKVIFFGFMIAVFVFILAAFFNECCGSGANRPQRRRRGGGGGGGGYGDDGPPPPYSASPPPYTP SSDPNERWRPGFWTGALGGGAAGYALGRRSAGNRSSSSSTWSRSSSSRRYDDPGEGSSGSRTPRFSSTATSTGFG STRRR* |
| Coding | >Ani_SJS100_1|g6191.t1 ATGTATACTCTACTCATTATACAGCTCCTGATTTCCCTCCTCGTCTTCCCAAACGCTGCTCTCTCCGACCGCCCC CCAGGCAAAGACGCCATCCTCCTCTCGCGCGTCCGTTCACTCACCCTCCGCGGAAATCGTCTCACCACTTCAAGA CGAGTATCTCCAATCCCGCAGCTAAAATGCACCGGCCCGTCCAAGCGCATCTGCAATATGTACGAGATCGACACA ATGCGATGCACAAACGAAGGCTACGACTACGATGAAGAAGACGTCCAGTGGACCTGCACTGCATCACTCCCACGA GAATTCAAGCTCGGGGCTACGGACGTGATTTGTGAGGGATACCGGAATGCCGACGATAAGTGGATATTGAAAGGG AGTTGTGGAGTCGAGTATCGCCTACTGCTGACGGAAGCCGGGGAGGAGAAATTTGGACACTTGCGCAATGAGAGA TCAAGCTCTTCAAATGATGAGCTTGGCCCCGGAGGCAAAGTGATCTTCTTTGGGTTTATGATCGCAGTTTTTGTG TTCATTTTGGCAGCGTTTTTCAATGAGTGTTGTGGGTCGGGGGCGAATCGGCCACAGCGACGACGACGTGGTGGT GGTGGTGGTGGTGGTGGTTACGGGGATGATGGCCCTCCGCCTCCGTACTCAGCCTCGCCGCCTCCTTATACTCCT TCTTCGGACCCTAATGAGCGCTGGAGACCCGGGTTTTGGACGGGTGCGTTGGGTGGTGGGGCGGCTGGTTATGCG CTGGGAAGAAGAAGCGCTGGGAATCGGTCTAGTTCGTCATCTACATGGAGCCGGTCCTCCTCGTCCAGAAGATAT GATGACCCTGGGGAGGGTAGCTCAGGATCGCGCACTCCGCGCTTCTCCAGCACCGCCACAAGTACCGGGTTTGGC TCAACACGCCGCAGGTAA |
| Transcript | >Ani_SJS100_1|g6191.t1 ATGTATACTCTACTCATTATACAGCTCCTGATTTCCCTCCTCGTCTTCCCAAACGCTGCTCTCTCCGACCGCCCC CCAGGCAAAGACGCCATCCTCCTCTCGCGCGTCCGTTCACTCACCCTCCGCGGAAATCGTCTCACCACTTCAAGA CGAGTATCTCCAATCCCGCAGCTAAAATGCACCGGCCCGTCCAAGCGCATCTGCAATATGTACGAGATCGACACA ATGCGATGCACAAACGAAGGCTACGACTACGATGAAGAAGACGTCCAGTGGACCTGCACTGCATCACTCCCACGA GAATTCAAGCTCGGGGCTACGGACGTGATTTGTGAGGGATACCGGAATGCCGACGATAAGTGGATATTGAAAGGG AGTTGTGGAGTCGAGTATCGCCTACTGCTGACGGAAGCCGGGGAGGAGAAATTTGGACACTTGCGCAATGAGAGA TCAAGCTCTTCAAATGATGAGCTTGGCCCCGGAGGCAAAGTGATCTTCTTTGGGTTTATGATCGCAGTTTTTGTG TTCATTTTGGCAGCGTTTTTCAATGAGTGTTGTGGGTCGGGGGCGAATCGGCCACAGCGACGACGACGTGGTGGT GGTGGTGGTGGTGGTGGTTACGGGGATGATGGCCCTCCGCCTCCGTACTCAGCCTCGCCGCCTCCTTATACTCCT TCTTCGGACCCTAATGAGCGCTGGAGACCCGGGTTTTGGACGGGTGCGTTGGGTGGTGGGGCGGCTGGTTATGCG CTGGGAAGAAGAAGCGCTGGGAATCGGTCTAGTTCGTCATCTACATGGAGCCGGTCCTCCTCGTCCAGAAGATAT GATGACCCTGGGGAGGGTAGCTCAGGATCGCGCACTCCGCGCTTCTCCAGCACCGCCACAAGTACCGGGTTTGGC TCAACACGCCGCAGGTAA |
| Gene | >Ani_SJS100_1|g6191.t1 ATGTATACTCTACTCATTATACAGCTCCTGATTTCCCTCCTCGTCTTCCCAAACGCTGCTCTCTCCGACCGCCCC CCAGGCAAAGACGCCATCCTCCTCTCGCGCGTCCGTTCACTCACCCTCCGCGGAAATCGTCTCACCACTTCAAGA CGAGTATCTCCAATCCCGCAGCTAAAATGCACCGGCCCGTCCAAGCGCATCTGCAATATGTACGAGATCGACACA ATGCGATGCACAAACGAAGGCTACGACTACGATGAAGAAGACGTCCAGTGGACCTGCACTGCATCACTCCCACGA GAATTCAAGCTCGGGGCTACGGACGTGATTTGTGAGGGATACCGGAATGCCGACGATAAGTGGATATTGAAAGGG AGTTGTGGAGTCGAGTATCGCCTACTGCTGACGGAAGCCGGGGAGGAGAAATTTGGACACTTGCGCAATGAGAGA TCAAGCTCTTCAAATGATGAGCTTGGCCCCGGAGGCAAAGTGATCTTCTTTGGGTTTATGATCGCAGTTTTTGTG TTCATTTTGGCAGCGTTTTTCAATGAGTGTTGTGGGTCGGGGGCGAATCGGCCACAGCGACGACGACGTGGTGGT GGTGGTGGTGGTGGTGGTTACGGGGATGATGGCCCTCCGCCTCCGTACTCAGCCTCGCCGCCTCCTTATACTCCT TCTTCGGACCCTAATGAGCGCTGGAGACCCGGGTTTTGGACGGGTGCGTTGGGTGGTGGGGCGGCTGGTTATGCG CTGGGAAGAAGAAGCGCTGGGAATCGGTCTAGTTCGTCATCTACATGGAGCCGGTCCTCCTCGTCCAGAAGATAT GATGACCCTGGGGAGGGTAGCTCAGGATCGCGCACTCCGCGCTTCTCCAGCACCGCCACAAGTACCGGGTTTGGC TCAACACGCCGCAGGTAA |