Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6180.t1
Gene name
Locationscaffold_037:138184..138706
Strand+
Gene length (bp)522
Transcript length (bp)471
Coding sequence length (bp)471
Protein length (aa) 157

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10178 PAC3 Proteasome assembly chaperone 3 2.0E-07 47 154

GO

GO Term Description Terminal node
GO:0043248 proteasome assembly Yes
GO:0071840 cellular component organization or biogenesis No
GO:0008150 biological_process No
GO:0022607 cellular component assembly No
GO:0009987 cellular process No
GO:0065003 protein-containing complex assembly No
GO:0016043 cellular component organization No
GO:0043933 protein-containing complex organization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6180.t1
MDSAPFDINQLQDLNLPYPAVTKQVVGDVKGIQTNVTLIKFSDRILITISQNGRLGHWLHVPLENKNPGTEGFHT
ISEPAEDSLLPIGNLTATSLLGGRAPGHEVVGQLYARQIASAIVTKTPNEKRMLVLGLGLETADADRDVFFAVID
LVLQCI*
Coding >Ani_SJS100_1|g6180.t1
ATGGATAGTGCGCCTTTTGACATCAACCAACTCCAGGATCTAAACCTGCCCTACCCCGCAGTCACGAAGCAGGTT
GTTGGAGATGTCAAGGGTATCCAGACAAATGTCACCTTGATCAAATTTAGTGACAGAATTTTAATCACAATCTCA
CAGAACGGCCGACTAGGACATTGGCTTCACGTGCCACTTGAGAACAAAAACCCAGGAACAGAGGGCTTTCACACC
ATTTCTGAGCCTGCTGAGGACAGTCTTCTTCCTATTGGCAATTTGACTGCCACGTCACTGCTCGGTGGCCGGGCT
CCTGGACATGAGGTAGTTGGTCAGCTTTATGCTCGTCAAATCGCCAGTGCCATTGTCACCAAGACGCCCAATGAG
AAACGTATGCTCGTTTTGGGCCTTGGGCTTGAAACTGCCGACGCGGATAGAGATGTCTTCTTTGCCGTCATTGAC
CTCGTGCTGCAATGCATCTAA
Transcript >Ani_SJS100_1|g6180.t1
ATGGATAGTGCGCCTTTTGACATCAACCAACTCCAGGATCTAAACCTGCCCTACCCCGCAGTCACGAAGCAGGTT
GTTGGAGATGTCAAGGGTATCCAGACAAATGTCACCTTGATCAAATTTAGTGACAGAATTTTAATCACAATCTCA
CAGAACGGCCGACTAGGACATTGGCTTCACGTGCCACTTGAGAACAAAAACCCAGGAACAGAGGGCTTTCACACC
ATTTCTGAGCCTGCTGAGGACAGTCTTCTTCCTATTGGCAATTTGACTGCCACGTCACTGCTCGGTGGCCGGGCT
CCTGGACATGAGGTAGTTGGTCAGCTTTATGCTCGTCAAATCGCCAGTGCCATTGTCACCAAGACGCCCAATGAG
AAACGTATGCTCGTTTTGGGCCTTGGGCTTGAAACTGCCGACGCGGATAGAGATGTCTTCTTTGCCGTCATTGAC
CTCGTGCTGCAATGCATCTAA
Gene >Ani_SJS100_1|g6180.t1
ATGGATAGTGCGCCTTTTGACATCAACCAACTCCAGGATCTAAACCTGCCCTACCCCGCAGTCACGAAGCAGGTT
GTTGGAGATGTCAAGGGTATCCAGACAAATGTCACCTTGATCAAATTTAGTGACAGAATTTTAATCACAATCTCA
CAGAACGGCCGACTAGGACATTGGGTTAGTCAATAGTCATGCCATACTCTTCTCATCTCAACTAACCTACTTCAG
CTTCACGTGCCACTTGAGAACAAAAACCCAGGAACAGAGGGCTTTCACACCATTTCTGAGCCTGCTGAGGACAGT
CTTCTTCCTATTGGCAATTTGACTGCCACGTCACTGCTCGGTGGCCGGGCTCCTGGACATGAGGTAGTTGGTCAG
CTTTATGCTCGTCAAATCGCCAGTGCCATTGTCACCAAGACGCCCAATGAGAAACGTATGCTCGTTTTGGGCCTT
GGGCTTGAAACTGCCGACGCGGATAGAGATGTCTTCTTTGCCGTCATTGACCTCGTGCTGCAATGCATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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