Protein ID | Ani_SJS100_1|g6161.t1 |
Gene name | |
Location | scaffold_037:83277..84411 |
Strand | + |
Gene length (bp) | 1134 |
Transcript length (bp) | 1020 |
Coding sequence length (bp) | 1020 |
Protein length (aa) | 340 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00230 | MIP | Major intrinsic protein | 2.6E-42 | 40 | 251 |
GO Term | Description | Terminal node |
---|---|---|
GO:0015267 | channel activity | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0016020 | membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0008150 | biological_process | No |
GO:0005575 | cellular_component | No |
GO:0051234 | establishment of localization | No |
GO:0022803 | passive transmembrane transporter activity | No |
GO:0051179 | localization | No |
GO:0009987 | cellular process | No |
GO:0005215 | transporter activity | No |
GO:0006810 | transport | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0003674 | molecular_function | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 39 | 61 | 22 |
2 | 96 | 118 | 22 |
3 | 125 | 147 | 22 |
4 | 167 | 186 | 19 |
5 | 193 | 215 | 22 |
6 | 235 | 257 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 6435 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6161.t1 MGPQQWFRKRNPDSQTAPMYRSSNNQLPMLHLADTTRNNFIAAVGEFVGTFLFLFFSFAGTQVSNTPKPAPGSPP NTSNLLYSSLCFGFSLMVNVWAFYRVTGGLFNPAVTLALCLVGGLSPIRGVILFGVQLIAGIASAGVVGALFPGD LNVGTRLGGGASISQGLFIEVFLTAQLVFIIIMLAVVKHKSTFLAPVGIGLVFFVTEMVGDYYTGGSLNPARSLG PDVINRSFPGYHWIYWVGPLLGSLLACGFFTFLKMFQYTTVNPGQDYNEWEAKMGSGGPGSWDMSMHRPSYNSEA TTVEQPQSPSAGRRNHTPTNSQPQNNPNIPNIPHGAEQV* |
Coding | >Ani_SJS100_1|g6161.t1 ATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATGTATAGGTCGTCGAATAAC CAGCTCCCTATGTTGCACCTCGCCGACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACC TTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACCCCCAAGCCAGCGCCCGGGTCTCCTCCA AACACCTCAAACCTGCTATACTCGTCGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGA GTGACTGGAGGTTTATTTAACCCCGCGGTCACTCTGGCCCTGTGTCTGGTTGGCGGATTATCTCCCATCCGTGGG GTTATTCTTTTCGGAGTTCAGCTCATCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGAC TTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAGGGATTGTTCATCGAAGTTTTCTTGACGGCT CAGTTAGTGTTTATTATCATCATGCTGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGC CTGGTATTCTTCGTGACTGAGATGGTTGGGGACTACTATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGT CCTGACGTCATCAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGCTGGGAAGTCTCCTC GCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAGTACACCACCGTCAACCCCGGTCAGGACTACAATGAATGG GAAGCCAAGATGGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTCCCTCATATAACTCCGAAGCC ACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGCAGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAAT AACCCTAATATTCCTAATATCCCTCACGGGGCAGAGCAGGTGTAG |
Transcript | >Ani_SJS100_1|g6161.t1 ATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATGTATAGGTCGTCGAATAAC CAGCTCCCTATGTTGCACCTCGCCGACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACC TTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACCCCCAAGCCAGCGCCCGGGTCTCCTCCA AACACCTCAAACCTGCTATACTCGTCGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGA GTGACTGGAGGTTTATTTAACCCCGCGGTCACTCTGGCCCTGTGTCTGGTTGGCGGATTATCTCCCATCCGTGGG GTTATTCTTTTCGGAGTTCAGCTCATCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGAC TTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAGGGATTGTTCATCGAAGTTTTCTTGACGGCT CAGTTAGTGTTTATTATCATCATGCTGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGC CTGGTATTCTTCGTGACTGAGATGGTTGGGGACTACTATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGT CCTGACGTCATCAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGCTGGGAAGTCTCCTC GCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAGTACACCACCGTCAACCCCGGTCAGGACTACAATGAATGG GAAGCCAAGATGGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTCCCTCATATAACTCCGAAGCC ACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGCAGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAAT AACCCTAATATTCCTAATATCCCTCACGGGGCAGAGCAGGTGTAG |
Gene | >Ani_SJS100_1|g6161.t1 ATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATGTATAGGTCGTCGAATAAC CAGCTCCCTATGTTGCACCTCGCCGACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACC TTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACCCCCAAGCCAGCGCCCGGGTCTCCTCCA AACACCTCAAACCTGCTATACTCGTCGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGA GTGACTGGAGGTTTATTTAACCCCGCGGTATGCCCTGCCATTCCAATGTCGGAATTTGCAATTGATCGTGATGCT AGGTCACTCTGGCCCTGTGTCTGGTTGGCGGATTATCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCA TCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGACTTGAATGTCGGCACTCGCTTGGGCG GTGGTGCCTCAATATCACAGGGATTGTTCATCGAAGTTTTCTTGACGGCTCAGTTAGTGTTTATTATCATCATGC TGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGCCTGGTATTCTTCGTGACTGAGATGG TTGGTAAGTAGATGTCTTCCACCCGACTGCTGCGAGATATTGTGCGACTAACCTCATCCTCTTCCAGGGGACTAC TATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCTGACGTCATCAACCGCAGTTTCCCCGGGTACCAC TGGATCTACTGGGTCGGTCCGTTGCTGGGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAG TACACCACCGTCAACCCCGGTCAGGACTACAATGAATGGGAAGCCAAGATGGGCTCGGGAGGTCCCGGATCGTGG GACATGTCGATGCACCGTCCCTCATATAACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGC AGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAACCCTAATATTCCTAATATCCCTCACGGGGCAGAG CAGGTGTAG |