Protein ID | Ani_SJS100_1|g6149.t1 |
Gene name | |
Location | scaffold_037:34506..35335 |
Strand | - |
Gene length (bp) | 829 |
Transcript length (bp) | 741 |
Coding sequence length (bp) | 741 |
Protein length (aa) | 247 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05630 | NPP1 | Necrosis inducing protein (NPP1) | 3.2E-54 | 50 | 244 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.999159 |
Orthofinder run ID | 3 |
Orthogroup | 6422 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6149.t1 MSLRTLLLAASTLSATAAAGKHRLHARDWIASDEIVGFNQTVPDNSTGDLYLAYQPYLKVVNGCVPFPGVDAEGD TDAGLAPTGASDGDCSSNTGQIYVRSNITSTSSTSTYPTALLYSWYMPKDEPSDGLGHRHDWEGVIIYLSDATTI SADNILAVCPSAHGGWDCSTDGYTLEGTKALIKYESIWPLDHSCGLTDVVGGTQPLVAWESLTTAARDALQTADF DKAIVPFKDSTFDENLAKATY* |
Coding | >Ani_SJS100_1|g6149.t1 ATGTCCCTCCGCACCCTCCTCCTCGCCGCATCAACCCTCTCCGCCACCGCAGCAGCAGGAAAACACCGCCTGCAC GCGCGCGACTGGATCGCCAGCGACGAAATCGTCGGCTTCAACCAGACCGTCCCGGACAACTCCACCGGCGACCTC TACCTCGCCTACCAGCCCTACCTGAAGGTCGTGAACGGATGTGTCCCGTTCCCAGGTGTTGACGCCGAAGGCGAT ACCGATGCCGGCCTCGCCCCCACCGGCGCCAGCGACGGCGACTGCAGCTCGAACACGGGCCAAATCTACGTGCGC AGCAACATCACCTCCACCTCCTCCACCTCGACCTACCCGACAGCACTGCTCTACAGCTGGTACATGCCCAAAGAC GAACCCAGCGACGGTCTCGGTCACCGACACGACTGGGAGGGCGTGATCATCTACCTGTCTGACGCGACCACCATC TCCGCGGATAATATCTTGGCTGTGTGTCCGTCTGCGCATGGCGGGTGGGATTGCTCCACGGATGGGTATACCCTT GAGGGTACGAAGGCGCTGATCAAGTATGAGAGTATCTGGCCGCTGGATCATAGTTGTGGGTTGACGGATGTGGTG GGTGGTACGCAGCCGTTGGTTGCGTGGGAGAGTTTGACTACGGCGGCGAGGGATGCGTTGCAGACGGCGGACTTT GATAAGGCTATTGTGCCGTTTAAGGATAGTACTTTTGATGAGAATCTTGCGAAAGCTACTTACTAG |
Transcript | >Ani_SJS100_1|g6149.t1 ATGTCCCTCCGCACCCTCCTCCTCGCCGCATCAACCCTCTCCGCCACCGCAGCAGCAGGAAAACACCGCCTGCAC GCGCGCGACTGGATCGCCAGCGACGAAATCGTCGGCTTCAACCAGACCGTCCCGGACAACTCCACCGGCGACCTC TACCTCGCCTACCAGCCCTACCTGAAGGTCGTGAACGGATGTGTCCCGTTCCCAGGTGTTGACGCCGAAGGCGAT ACCGATGCCGGCCTCGCCCCCACCGGCGCCAGCGACGGCGACTGCAGCTCGAACACGGGCCAAATCTACGTGCGC AGCAACATCACCTCCACCTCCTCCACCTCGACCTACCCGACAGCACTGCTCTACAGCTGGTACATGCCCAAAGAC GAACCCAGCGACGGTCTCGGTCACCGACACGACTGGGAGGGCGTGATCATCTACCTGTCTGACGCGACCACCATC TCCGCGGATAATATCTTGGCTGTGTGTCCGTCTGCGCATGGCGGGTGGGATTGCTCCACGGATGGGTATACCCTT GAGGGTACGAAGGCGCTGATCAAGTATGAGAGTATCTGGCCGCTGGATCATAGTTGTGGGTTGACGGATGTGGTG GGTGGTACGCAGCCGTTGGTTGCGTGGGAGAGTTTGACTACGGCGGCGAGGGATGCGTTGCAGACGGCGGACTTT GATAAGGCTATTGTGCCGTTTAAGGATAGTACTTTTGATGAGAATCTTGCGAAAGCTACTTACTAG |
Gene | >Ani_SJS100_1|g6149.t1 ATGTCCCTCCGCACCCTCCTCCTCGCCGCATCAACCCTCTCCGCCACCGCAGCAGCAGGAAAACACCGCCTGCAC GCGCGCGACTGGATCGCCAGCGACGAAATCGTCGGCTTCAACCAGACCGTCCCGGACAACTCCACCGGCGACCTC TACCTCGCCTACCAGCCCTACCTGAAGGTCGTGAACGGATGTGTCCCGTTCCCAGGTGTTGACGCCGAAGGCGAT ACCGAGTATGTTCCCTACCCCCCCAATACCTCCCCTACTACTTTAATATCCCCCCAAGAAAATCCTCCTAATAAG CGATAAACAATGGAATAGTGCCGGCCTCGCCCCCACCGGCGCCAGCGACGGCGACTGCAGCTCGAACACGGGCCA AATCTACGTGCGCAGCAACATCACCTCCACCTCCTCCACCTCGACCTACCCGACAGCACTGCTCTACAGCTGGTA CATGCCCAAAGACGAACCCAGCGACGGTCTCGGTCACCGACACGACTGGGAGGGCGTGATCATCTACCTGTCTGA CGCGACCACCATCTCCGCGGATAATATCTTGGCTGTGTGTCCGTCTGCGCATGGCGGGTGGGATTGCTCCACGGA TGGGTATACCCTTGAGGGTACGAAGGCGCTGATCAAGTATGAGAGTATCTGGCCGCTGGATCATAGTTGTGGGTT GACGGATGTGGTGGGTGGTACGCAGCCGTTGGTTGCGTGGGAGAGTTTGACTACGGCGGCGAGGGATGCGTTGCA GACGGCGGACTTTGATAAGGCTATTGTGCCGTTTAAGGATAGTACTTTTGATGAGAATCTTGCGAAAGCTACTTA CTAG |