Protein ID | Ani_SJS100_1|g6145.t1 |
Gene name | |
Location | scaffold_037:21807..23665 |
Strand | - |
Gene length (bp) | 1858 |
Transcript length (bp) | 1401 |
Coding sequence length (bp) | 1401 |
Protein length (aa) | 467 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 2.0E-35 | 63 | 446 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 53 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 65 | 87 | 22 |
2 | 91 | 113 | 22 |
3 | 133 | 155 | 22 |
4 | 170 | 192 | 22 |
5 | 199 | 221 | 22 |
6 | 241 | 263 | 22 |
7 | 275 | 297 | 22 |
8 | 317 | 336 | 19 |
9 | 357 | 379 | 22 |
10 | 389 | 411 | 22 |
11 | 424 | 446 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6145.t1 MAHPTGDKVDSHLNVQTGQFFQDGREEPYLHDAEEKQDEKKSSPIYNDTFGDEEYAEVKYKVLSWWQCGFLMVAE TVSLGILSLPAVVATLGLAPAIVLIVGLGLLATYTGYVIGQFRWRYPHVQNLADAGEILFGSIGREIFGIGQLLL VIFIMASHLLTFSVAMNTITEHGTCSIVFGVVGLVICFLLGLPRTSANVSYLSVASFISVFSAVMIVMIAVGVER PYKGTLSATVDTSLYEAFLAVCNIVFSFSGHVAFFGFMSELKDHREYPKALCLLQGLDTILYLVTSVVIYIYAGP NVTSPALGSASELVGKVAYGIALPTIIIGGVVNGHVACKYVYVRIFRHGDRMHSRDLLATGSWVGIALGLWIIAW IIAEAIPVFNDLLSLIASLFASWSTFGFSGMFWLYLNKDRLFSSPRKIALTIFNVIIIGIAACICGLGLYVSGRS LHDDANGSSFSCASNA* |
Coding | >Ani_SJS100_1|g6145.t1 ATGGCCCATCCAACTGGCGACAAGGTTGACTCCCATCTGAATGTTCAGACGGGTCAGTTCTTCCAGGATGGCCGA GAGGAGCCCTATCTGCATGATGCAGAGGAGAAGCAGGACGAGAAGAAGAGCAGCCCCATCTATAATGACACCTTT GGTGATGAAGAGTATGCCGAGGTTAAATATAAGGTCCTGAGCTGGTGGCAATGTGGTTTTCTCATGGTTGCGGAA ACCGTGTCTCTCGGTATATTGTCGCTGCCTGCTGTTGTCGCAACTCTGGGTCTTGCTCCCGCTATTGTTCTCATC GTTGGCCTCGGTCTTCTGGCCACCTACACCGGTTACGTCATCGGCCAGTTCAGATGGCGCTATCCACATGTCCAG AATCTGGCTGATGCCGGTGAGATCCTCTTTGGGTCTATTGGTCGCGAGATCTTCGGTATCGGCCAGCTGCTGCTT GTCATCTTCATCATGGCGAGCCATCTGTTGACCTTCTCGGTTGCCATGAACACGATTACGGAACATGGAACTTGC TCCATTGTTTTCGGTGTTGTCGGCCTCGTGATCTGCTTCCTCCTGGGCCTACCTAGGACGTCTGCAAACGTGTCC TACCTCTCTGTTGCTTCTTTCATCAGTGTGTTCTCTGCCGTGATGATTGTCATGATTGCCGTTGGTGTGGAACGG CCTTACAAGGGAACCCTATCAGCAACGGTGGATACCAGCTTGTATGAAGCATTCCTTGCCGTCTGCAACATCGTC TTCTCCTTCTCGGGCCACGTTGCATTCTTCGGCTTCATGTCCGAATTAAAGGATCACAGAGAGTACCCTAAGGCC CTGTGTCTTCTCCAGGGTCTCGACACCATTCTCTACCTTGTCACTTCCGTAGTGATCTATATCTATGCGGGACCT AATGTCACGTCCCCAGCACTAGGCTCCGCTAGTGAGCTCGTGGGCAAAGTGGCCTACGGAATCGCCCTCCCTACT ATCATCATTGGCGGTGTTGTAAACGGTCATGTCGCTTGTAAATATGTCTATGTCCGTATCTTCCGTCACGGAGAT CGGATGCACAGCCGCGACCTCTTGGCAACCGGATCTTGGGTGGGCATTGCCCTGGGATTGTGGATTATTGCCTGG ATCATTGCAGAGGCCATTCCTGTGTTCAATGATCTGCTGAGTTTGATTGCGTCCCTTTTCGCCAGTTGGTCTACA TTCGGCTTCAGCGGCATGTTCTGGCTTTACCTCAACAAGGACCGACTGTTCTCTTCGCCTAGGAAGATTGCCCTG ACTATCTTCAACGTTATTATTATCGGTATTGCAGCCTGCATTTGCGGTCTCGGACTCTACGTATCCGGCCGGTCT CTTCACGACGACGCCAACGGCAGCAGTTTCTCCTGTGCCAGTAATGCTTGA |
Transcript | >Ani_SJS100_1|g6145.t1 ATGGCCCATCCAACTGGCGACAAGGTTGACTCCCATCTGAATGTTCAGACGGGTCAGTTCTTCCAGGATGGCCGA GAGGAGCCCTATCTGCATGATGCAGAGGAGAAGCAGGACGAGAAGAAGAGCAGCCCCATCTATAATGACACCTTT GGTGATGAAGAGTATGCCGAGGTTAAATATAAGGTCCTGAGCTGGTGGCAATGTGGTTTTCTCATGGTTGCGGAA ACCGTGTCTCTCGGTATATTGTCGCTGCCTGCTGTTGTCGCAACTCTGGGTCTTGCTCCCGCTATTGTTCTCATC GTTGGCCTCGGTCTTCTGGCCACCTACACCGGTTACGTCATCGGCCAGTTCAGATGGCGCTATCCACATGTCCAG AATCTGGCTGATGCCGGTGAGATCCTCTTTGGGTCTATTGGTCGCGAGATCTTCGGTATCGGCCAGCTGCTGCTT GTCATCTTCATCATGGCGAGCCATCTGTTGACCTTCTCGGTTGCCATGAACACGATTACGGAACATGGAACTTGC TCCATTGTTTTCGGTGTTGTCGGCCTCGTGATCTGCTTCCTCCTGGGCCTACCTAGGACGTCTGCAAACGTGTCC TACCTCTCTGTTGCTTCTTTCATCAGTGTGTTCTCTGCCGTGATGATTGTCATGATTGCCGTTGGTGTGGAACGG CCTTACAAGGGAACCCTATCAGCAACGGTGGATACCAGCTTGTATGAAGCATTCCTTGCCGTCTGCAACATCGTC TTCTCCTTCTCGGGCCACGTTGCATTCTTCGGCTTCATGTCCGAATTAAAGGATCACAGAGAGTACCCTAAGGCC CTGTGTCTTCTCCAGGGTCTCGACACCATTCTCTACCTTGTCACTTCCGTAGTGATCTATATCTATGCGGGACCT AATGTCACGTCCCCAGCACTAGGCTCCGCTAGTGAGCTCGTGGGCAAAGTGGCCTACGGAATCGCCCTCCCTACT ATCATCATTGGCGGTGTTGTAAACGGTCATGTCGCTTGTAAATATGTCTATGTCCGTATCTTCCGTCACGGAGAT CGGATGCACAGCCGCGACCTCTTGGCAACCGGATCTTGGGTGGGCATTGCCCTGGGATTGTGGATTATTGCCTGG ATCATTGCAGAGGCCATTCCTGTGTTCAATGATCTGCTGAGTTTGATTGCGTCCCTTTTCGCCAGTTGGTCTACA TTCGGCTTCAGCGGCATGTTCTGGCTTTACCTCAACAAGGACCGACTGTTCTCTTCGCCTAGGAAGATTGCCCTG ACTATCTTCAACGTTATTATTATCGGTATTGCAGCCTGCATTTGCGGTCTCGGACTCTACGTATCCGGCCGGTCT CTTCACGACGACGCCAACGGCAGCAGTTTCTCCTGTGCCAGTAATGCTTGA |
Gene | >Ani_SJS100_1|g6145.t1 ATGGCCCATCCAACTGGCGACAAGGTTGACTCCCATCTGAATGTTCAGACGGGTCAGTTCTTCCAGGATGGCCGA GAGGAGCCCTATCTGCATGATGCAGAGGAGAAGCAGGACGAGAAGAAGAGCAGCCCCATCTATAATGACACCTTT GGTGATGAAGAGTATGCCGAGGTTAAATATAAGGTCCTGAGCTGGTGGTATGTTCATCCGACCCTTCTATATCTG CTACTGAACAACTGACTCACATGTTGCAGGCAATGTGGTTTTCGTAAGTGATTTGGATGCTAGCATCAGTCGACA GCTTGTGATACTAACATTGCCAGTCATGGTTGCGGAAACCGTGTCTCTCGGTATATTGTCGCTGCCTGCTGTTGT CGCAACTCTGGGTCTTGCTCCGTATGTATCTACCCAGCCGCTGCGTGAAGTGATATCTTCCTCTAACAAAGTGTA GCGCTATTGTTCTCATCGTTGGCCTCGGTCTTCTGGCCACCTACACCGGTTACGTCATCGGCCAGTTCAGATGGC GCTATCCACATGTCCAGAATCTGGCTGATGCCGGTGAGATCCTCTTTGGGTCTATTGGTCGCGAGATCTTCGGTA TCGGCCAGCTGCTGCTTGTCATCTTCATCATGGCGAGCCATCTGTTGACCTTCTCGGTTGCCATGAACACGATTA CGGAACATGGAACTTGCTCCATTGTTTTCGGTGTTGTCGGCCTCGTGATCTGCTTCCTCCTGGGCCTACCTAGGA CGTCTGCAAACGTGTCCTACCTCTCTGTTGCTTGTAAGTCGCCAACAGGGCCAGACACTTCTATGATACTAACCC CCGCAGCTTTCATCAGTGTGTTCTCTGCCGTGATGATTGTCATGATTGCCGTTGGTGTGGAACGGCCTTACAAGG GAACCCTATCAGCAACGGTGGATACCAGCTTGTATGAAGCATTCCTTGCCGTCTGCAACATCGTCTTCTCCTTCT GTGGGTCACTTTCCCTTCTGCATTAGCTAACATCTACTAACATGCAATAGCGGGCCACGTTGCATTCTTCGGCTT CATGTCCGAATTAAAGGATCACAGAGAGTACCCTAAGGCCCTGTGTCTTCTCCAGGGTCTCGACACCATTCTCTA CCTTGTCACTTCCGTAGTGATCTATATCTATGCGGGACCTAATGTCACGTCCCCAGCACTAGGCTCCGCTAGTGA GCTCGTGGGCAAAGTGGCCTACGGAATCGCCCTCCCTACTGTACGTGCCTTGCTCATATGGCCCATGCTCTACTG ACACTTGATAGATCATCATTGGCGGTGTTGTAAACGGTCATGTCGCTTGTAAATATGTCTATGTCCGTATCTTCC GTCACGGAGATCGGATGCACAGCCGCGACCTCTTGGCAACCGGATCTTGGGTGGGCATTGCCCTGGGATTGTGGA TTATTGCCTGGATCATTGCAGAGGCCATTCCTGTGTTCAATGATCTGCTGAGTTTGATTGTACGATGTCCGCCTC TTTCACTCAAGTATCATACTGACCGCGTTTCAGGCGTCCCTTTTCGCCAGTTGGTCTACATGTAAGCTCATTATC GCCTGCTCGTCATTCACCCACTAACAATAAACAGTCGGCTTCAGCGGCATGTTCTGGCTTTACCTCAACAAGGAC CGACTGTTCTCTTCGCCTAGGAAGATTGCCCTGACTATCTTCAACGTTATTATTATCGGTATTGCAGCCTGCATT GTAAGTATATTACTCCGCTTTCGTCCATCAACTCTAACCACAGCACCAGTGCGGTCTCGGACTCTACGTATCCGG CCGGTCTCTTCACGACGACGCCAACGGCAGCAGTTTCTCCTGTGCCAGTAATGCTTGA |