© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g6130.t1 |
| Gene name | |
| Location | scaffold_036:281019..282570 |
| Strand | - |
| Gene length (bp) | 1551 |
| Transcript length (bp) | 1551 |
| Coding sequence length (bp) | 1551 |
| Protein length (aa) | 517 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.8E-33 | 74 | 439 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 71 | 93 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 135 | 157 | 22 |
| 4 | 162 | 184 | 22 |
| 5 | 197 | 216 | 19 |
| 6 | 226 | 248 | 22 |
| 7 | 298 | 320 | 22 |
| 8 | 330 | 352 | 22 |
| 9 | 361 | 379 | 18 |
| 10 | 389 | 408 | 19 |
| 11 | 421 | 443 | 22 |
| 12 | 453 | 475 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6130.t1 MTADQKKPGLDSSAPNEENIKHGQIDILDRRSEQGEDVAVQFLAQLDPAIMAAPISDTEARRVLWKIDLILIPLI MVTCVLAAVDKVIISNAAIYGMETDTHLTGNQYSWVGSIFYFGYLLFEYPAALLIQRLPVAKLYVGMVFAWAVLM LCTAATQNFAGLATVRFLMGMLEASVFPISSILTVMWWKTSEQPLRVAFWFNQLSSVFSGVVSYGIGHTHTALHP WRLLFLVLGAFSILWSIVLYIFLPDSPVQCWYFSDREKFVCLERVKDNNTGMEDKTIKWYQVRECLLDPKTWLLA LFSLAQNIPNGGLVTFSALIVTGLGYSSLITTVLGIPTGVLATVWQILLSLIASRIPNSRCFIIAVSNFVPMACA ILMWKLPRSNKHGLLASYYVFYTYWAPYVLSTSLPMANTSGHSKKLTLNAIFFIAYCVGNIIGPQVFRSTDAPSY SHGYEGLLACLVIAIVAISAYGVLCKWENQRRDREQQQQQQSVSVSEDAAFSDLTDKEKRSFRYTY* |
| Coding | >Ani_SJS100_1|g6130.t1 ATGACTGCCGACCAGAAGAAACCTGGCCTCGACAGCAGCGCCCCCAACGAGGAAAACATCAAGCATGGCCAGATA GATATCCTCGACCGTCGGTCGGAGCAAGGGGAAGATGTTGCAGTGCAATTTCTAGCTCAGCTCGATCCCGCCATC ATGGCGGCACCCATCTCCGACACAGAAGCGCGCCGCGTGTTGTGGAAGATTGATTTGATTTTGATCCCACTGATC ATGGTCACTTGCGTTCTCGCGGCAGTCGACAAGGTCATCATCTCCAATGCCGCTATCTATGGCATGGAGACTGAT ACCCATCTCACCGGCAACCAATACTCCTGGGTGGGCTCGATATTCTACTTTGGCTACCTGCTCTTCGAGTACCCC GCTGCGTTGCTCATCCAGCGGCTCCCCGTAGCCAAACTCTACGTGGGCATGGTCTTTGCTTGGGCAGTCTTGATG CTGTGCACGGCCGCTACGCAGAACTTTGCGGGTCTGGCGACAGTACGCTTCCTCATGGGTATGCTCGAGGCATCG GTGTTTCCCATCTCCAGCATTTTAACCGTCATGTGGTGGAAGACGAGTGAGCAACCTCTCCGGGTGGCCTTCTGG TTTAACCAGCTCTCATCCGTCTTCTCTGGAGTTGTCAGCTACGGCATCGGACACACCCACACAGCACTACACCCC TGGCGACTTCTCTTCCTCGTACTCGGCGCATTTTCCATCCTCTGGTCAATTGTCCTATACATCTTCCTACCAGAC TCCCCAGTACAATGCTGGTACTTCTCCGACCGCGAAAAGTTCGTATGTCTAGAGCGAGTCAAAGACAACAACACC GGCATGGAAGATAAGACGATCAAATGGTATCAAGTGCGTGAATGTCTCCTCGACCCAAAGACATGGCTCCTAGCT CTTTTCTCGCTCGCTCAGAACATCCCTAACGGCGGCCTCGTCACCTTCTCCGCCCTCATCGTCACCGGACTCGGC TATTCGTCCCTGATCACCACCGTCCTAGGCATCCCCACCGGTGTGCTCGCCACCGTATGGCAGATCCTGCTCTCT CTCATCGCCTCCCGCATACCAAATTCCCGCTGTTTCATCATCGCCGTCTCCAACTTCGTCCCTATGGCATGTGCC ATTCTCATGTGGAAACTGCCCCGCTCCAACAAGCATGGCCTCCTCGCCTCTTACTACGTCTTTTACACTTACTGG GCGCCCTACGTGCTATCTACTTCGCTCCCCATGGCCAACACCAGCGGTCACTCAAAGAAATTGACATTAAATGCT ATCTTCTTCATCGCATACTGCGTTGGGAATATCATCGGTCCGCAGGTGTTTCGCTCCACAGACGCCCCGAGTTAC TCGCACGGATATGAGGGCTTGCTAGCTTGTCTGGTTATTGCAATTGTCGCGATCTCAGCCTACGGAGTACTCTGT AAATGGGAGAACCAGCGACGGGACCGTGAGCAGCAGCAGCAGCAGCAGTCTGTTAGTGTCTCGGAAGATGCAGCA TTTTCGGACTTGACGGATAAAGAGAAGAGATCGTTCCGGTATACGTATTAG |
| Transcript | >Ani_SJS100_1|g6130.t1 ATGACTGCCGACCAGAAGAAACCTGGCCTCGACAGCAGCGCCCCCAACGAGGAAAACATCAAGCATGGCCAGATA GATATCCTCGACCGTCGGTCGGAGCAAGGGGAAGATGTTGCAGTGCAATTTCTAGCTCAGCTCGATCCCGCCATC ATGGCGGCACCCATCTCCGACACAGAAGCGCGCCGCGTGTTGTGGAAGATTGATTTGATTTTGATCCCACTGATC ATGGTCACTTGCGTTCTCGCGGCAGTCGACAAGGTCATCATCTCCAATGCCGCTATCTATGGCATGGAGACTGAT ACCCATCTCACCGGCAACCAATACTCCTGGGTGGGCTCGATATTCTACTTTGGCTACCTGCTCTTCGAGTACCCC GCTGCGTTGCTCATCCAGCGGCTCCCCGTAGCCAAACTCTACGTGGGCATGGTCTTTGCTTGGGCAGTCTTGATG CTGTGCACGGCCGCTACGCAGAACTTTGCGGGTCTGGCGACAGTACGCTTCCTCATGGGTATGCTCGAGGCATCG GTGTTTCCCATCTCCAGCATTTTAACCGTCATGTGGTGGAAGACGAGTGAGCAACCTCTCCGGGTGGCCTTCTGG TTTAACCAGCTCTCATCCGTCTTCTCTGGAGTTGTCAGCTACGGCATCGGACACACCCACACAGCACTACACCCC TGGCGACTTCTCTTCCTCGTACTCGGCGCATTTTCCATCCTCTGGTCAATTGTCCTATACATCTTCCTACCAGAC TCCCCAGTACAATGCTGGTACTTCTCCGACCGCGAAAAGTTCGTATGTCTAGAGCGAGTCAAAGACAACAACACC GGCATGGAAGATAAGACGATCAAATGGTATCAAGTGCGTGAATGTCTCCTCGACCCAAAGACATGGCTCCTAGCT CTTTTCTCGCTCGCTCAGAACATCCCTAACGGCGGCCTCGTCACCTTCTCCGCCCTCATCGTCACCGGACTCGGC TATTCGTCCCTGATCACCACCGTCCTAGGCATCCCCACCGGTGTGCTCGCCACCGTATGGCAGATCCTGCTCTCT CTCATCGCCTCCCGCATACCAAATTCCCGCTGTTTCATCATCGCCGTCTCCAACTTCGTCCCTATGGCATGTGCC ATTCTCATGTGGAAACTGCCCCGCTCCAACAAGCATGGCCTCCTCGCCTCTTACTACGTCTTTTACACTTACTGG GCGCCCTACGTGCTATCTACTTCGCTCCCCATGGCCAACACCAGCGGTCACTCAAAGAAATTGACATTAAATGCT ATCTTCTTCATCGCATACTGCGTTGGGAATATCATCGGTCCGCAGGTGTTTCGCTCCACAGACGCCCCGAGTTAC TCGCACGGATATGAGGGCTTGCTAGCTTGTCTGGTTATTGCAATTGTCGCGATCTCAGCCTACGGAGTACTCTGT AAATGGGAGAACCAGCGACGGGACCGTGAGCAGCAGCAGCAGCAGCAGTCTGTTAGTGTCTCGGAAGATGCAGCA TTTTCGGACTTGACGGATAAAGAGAAGAGATCGTTCCGGTATACGTATTAG |
| Gene | >Ani_SJS100_1|g6130.t1 ATGACTGCCGACCAGAAGAAACCTGGCCTCGACAGCAGCGCCCCCAACGAGGAAAACATCAAGCATGGCCAGATA GATATCCTCGACCGTCGGTCGGAGCAAGGGGAAGATGTTGCAGTGCAATTTCTAGCTCAGCTCGATCCCGCCATC ATGGCGGCACCCATCTCCGACACAGAAGCGCGCCGCGTGTTGTGGAAGATTGATTTGATTTTGATCCCACTGATC ATGGTCACTTGCGTTCTCGCGGCAGTCGACAAGGTCATCATCTCCAATGCCGCTATCTATGGCATGGAGACTGAT ACCCATCTCACCGGCAACCAATACTCCTGGGTGGGCTCGATATTCTACTTTGGCTACCTGCTCTTCGAGTACCCC GCTGCGTTGCTCATCCAGCGGCTCCCCGTAGCCAAACTCTACGTGGGCATGGTCTTTGCTTGGGCAGTCTTGATG CTGTGCACGGCCGCTACGCAGAACTTTGCGGGTCTGGCGACAGTACGCTTCCTCATGGGTATGCTCGAGGCATCG GTGTTTCCCATCTCCAGCATTTTAACCGTCATGTGGTGGAAGACGAGTGAGCAACCTCTCCGGGTGGCCTTCTGG TTTAACCAGCTCTCATCCGTCTTCTCTGGAGTTGTCAGCTACGGCATCGGACACACCCACACAGCACTACACCCC TGGCGACTTCTCTTCCTCGTACTCGGCGCATTTTCCATCCTCTGGTCAATTGTCCTATACATCTTCCTACCAGAC TCCCCAGTACAATGCTGGTACTTCTCCGACCGCGAAAAGTTCGTATGTCTAGAGCGAGTCAAAGACAACAACACC GGCATGGAAGATAAGACGATCAAATGGTATCAAGTGCGTGAATGTCTCCTCGACCCAAAGACATGGCTCCTAGCT CTTTTCTCGCTCGCTCAGAACATCCCTAACGGCGGCCTCGTCACCTTCTCCGCCCTCATCGTCACCGGACTCGGC TATTCGTCCCTGATCACCACCGTCCTAGGCATCCCCACCGGTGTGCTCGCCACCGTATGGCAGATCCTGCTCTCT CTCATCGCCTCCCGCATACCAAATTCCCGCTGTTTCATCATCGCCGTCTCCAACTTCGTCCCTATGGCATGTGCC ATTCTCATGTGGAAACTGCCCCGCTCCAACAAGCATGGCCTCCTCGCCTCTTACTACGTCTTTTACACTTACTGG GCGCCCTACGTGCTATCTACTTCGCTCCCCATGGCCAACACCAGCGGTCACTCAAAGAAATTGACATTAAATGCT ATCTTCTTCATCGCATACTGCGTTGGGAATATCATCGGTCCGCAGGTGTTTCGCTCCACAGACGCCCCGAGTTAC TCGCACGGATATGAGGGCTTGCTAGCTTGTCTGGTTATTGCAATTGTCGCGATCTCAGCCTACGGAGTACTCTGT AAATGGGAGAACCAGCGACGGGACCGTGAGCAGCAGCAGCAGCAGCAGTCTGTTAGTGTCTCGGAAGATGCAGCA TTTTCGGACTTGACGGATAAAGAGAAGAGATCGTTCCGGTATACGTATTAG |