Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6128.t1
Gene name
Locationscaffold_036:277018..278790
Strand+
Gene length (bp)1772
Transcript length (bp)1560
Coding sequence length (bp)1560
Protein length (aa) 520

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 1.5E-53 151 509
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 3.7E-08 11 47

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0043167 ion binding No
GO:0009889 regulation of biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0050789 regulation of biological process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0065007 biological regulation No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0051252 regulation of RNA metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0050794 regulation of cellular process No
GO:0043169 cation binding No
GO:0019222 regulation of metabolic process No
GO:0046914 transition metal ion binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0008150 biological_process No
GO:0010468 regulation of gene expression No
GO:0046872 metal ion binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6128.t1
MAPLTISRTRTGCWACRARRVKCDETHPVCRRCARNNRCCEYSLQLTWLDESIAKGVCHGRAGVWSKNGRKRKDV
SNEQSLEMVRHTVPKASHQQWMFLNTSADDVNRLCMQYQTVYGGILPSHQRRLILSPALNTMPATASNRSREDQM
LLAFFEAVICSSSTLVDNVQSNPYRYLILPMALNSDGIYHAALAISANTLRLSKVQYRVPALEHHHRALLYLQSL
LDRESWSNWEMDEILGLVLMLCWFEISDHSRSSWVTHLNGFQDVMSARKQRHWKTSSQHSQELLGFFDRYFAFHL
VLARTAFRWDGPRTHPCLSALPSSPSSEIIDPYMGFSHALLLLINEVTDLAWQEHELDIQKVYGLKHSLEVLRQT
PPHGDINLHSGQECMVIAEANRLGAILLLSEEKLRYVRQILDLIQAHKSNMMRTAVLPLWPLFLAGCCVSDDNDR
VIVLQIFQEWEAIRRFGNIAPAREVIEMVWRRRDLNQNEFANGAMSGKTARFEWEHAMTMLGGLKLALT*
Coding >Ani_SJS100_1|g6128.t1
ATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAGTGTGATGAG
ACCCACCCCGTCTGCCGTCGCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTGGCTTGAT
GAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTC
TCAAATGAGCAGAGTCTGGAGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGATGTTTCTAAAC
ACGTCCGCTGACGACGTGAACCGGCTCTGTATGCAGTACCAAACGGTATATGGCGGGATTTTACCCAGTCATCAA
CGACGGCTGATACTATCACCCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAGAGGACCAAATG
CTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATCCATATCGA
TACTTGATCCTGCCCATGGCCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCGCAAATACCCTG
CGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCCAATCTCTT
CTAGATCGAGAGAGTTGGTCGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAG
ATCTCAGATCATAGTCGTTCATCGTGGGTGACACACCTTAACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAA
CGACATTGGAAAACATCATCGCAGCACAGTCAGGAGCTTCTTGGTTTTTTCGACCGCTACTTTGCTTTCCACCTC
GTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCACGAACACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCA
TCCTCAGAAATTATTGACCCTTATATGGGATTTAGCCACGCACTACTTCTCTTAATAAATGAAGTGACTGACTTG
GCATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTATGGGCTGAAGCACTCATTGGAGGTGCTCCGTCAGACG
CCACCTCATGGGGATATTAACTTACACTCAGGACAGGAATGTATGGTCATTGCTGAAGCAAACCGCTTGGGTGCA
ATACTGCTCCTCTCGGAGGAGAAACTCCGCTATGTTCGGCAGATTCTCGATCTTATTCAGGCGCACAAGTCCAAC
ATGATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGACGACAACGACAGA
GTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGGCAATATCGCACCGGCAAGAGAAGTG
ATAGAGATGGTCTGGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCAGGGAAGACAGCG
CGCTTTGAATGGGAACATGCGATGACGATGCTTGGAGGGTTGAAGCTAGCGCTAACATAG
Transcript >Ani_SJS100_1|g6128.t1
ATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAGTGTGATGAG
ACCCACCCCGTCTGCCGTCGCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTGGCTTGAT
GAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTC
TCAAATGAGCAGAGTCTGGAGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGATGTTTCTAAAC
ACGTCCGCTGACGACGTGAACCGGCTCTGTATGCAGTACCAAACGGTATATGGCGGGATTTTACCCAGTCATCAA
CGACGGCTGATACTATCACCCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAGAGGACCAAATG
CTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATCCATATCGA
TACTTGATCCTGCCCATGGCCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCGCAAATACCCTG
CGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCCAATCTCTT
CTAGATCGAGAGAGTTGGTCGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAG
ATCTCAGATCATAGTCGTTCATCGTGGGTGACACACCTTAACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAA
CGACATTGGAAAACATCATCGCAGCACAGTCAGGAGCTTCTTGGTTTTTTCGACCGCTACTTTGCTTTCCACCTC
GTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCACGAACACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCA
TCCTCAGAAATTATTGACCCTTATATGGGATTTAGCCACGCACTACTTCTCTTAATAAATGAAGTGACTGACTTG
GCATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTATGGGCTGAAGCACTCATTGGAGGTGCTCCGTCAGACG
CCACCTCATGGGGATATTAACTTACACTCAGGACAGGAATGTATGGTCATTGCTGAAGCAAACCGCTTGGGTGCA
ATACTGCTCCTCTCGGAGGAGAAACTCCGCTATGTTCGGCAGATTCTCGATCTTATTCAGGCGCACAAGTCCAAC
ATGATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGACGACAACGACAGA
GTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGGCAATATCGCACCGGCAAGAGAAGTG
ATAGAGATGGTCTGGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCAGGGAAGACAGCG
CGCTTTGAATGGGAACATGCGATGACGATGCTTGGAGGGTTGAAGCTAGCGCTAACATAG
Gene >Ani_SJS100_1|g6128.t1
ATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAGTGTGATGGT
ATTATAGTTTCCTCTTGGTTTGAAAAGCTAGTGTAAGCTAACACATTAGCAAAGAGACCCACCCCGTCTGCCGTC
GCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTGGCTTGATGAATCAATCGCCAAGGGCG
TGTGTCATGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAAATGAGCAGAGTCTGG
AGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGATGTTTCTAAACACGTCCGCTGACGACGTGA
ACCGGCTCTGTATGCAGTACCAAACGGTATATGGCGGGATTTTACCCAGTCATCAACGACGGCTGATACTATCAC
CCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAGAGGACCAAATGCTACTGGCATTCTTTGAGG
CAGTCATTTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCCTGCCCATGG
CCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCGCAAATACCCTGCGTCTTTCCAAAGTACAGT
ATCGTGTCCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGAGAGTTGGT
CGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAGGTATTGAAGCCTTTTCACC
ATAATACAGCCAATTAGTTGTGAGAATTGACACCATTAGATCTCAGATCATAGTCGTTCATCGTGGGTGACACAC
CTTAACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAACGACATTGGAAAACATCATCGCAGCACAGTCAGGAG
CTTCTTGGTTTTTTCGACCGCTACTTTGCTTTCCACCTCGTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCA
CGAACACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAATTATTGACCCTTATATGGGATTTAGC
CACGCACTACTTCTCTTAATAAATGAAGTGACTGACTTGGCATGGCAAGAACATGAGCTGGACATTCAGAAGGTG
TATGGGCTGAAGCACTCATTGGAGGTGCTCCGTCAGACGCCACCTCATGGGGATATTAACTTACACTCAGGACAG
GAATGTATGGTCATTGCTGAAGCAAACCGCTTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAA
TCAATTTCTTCATGTTCATCATTTAGCTCGGAGGAGAAACTCCGCTATGTTCGGCAGATTCTCGATCTTATTCAG
GCGCACAAGTCCAACATGATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCG
GACGACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGGCGTACGTCTG
TCCACCCATATATACCATGTCACAAGCTAATGATTTAGAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCT
GGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCAGGGAAGACAGCGCGCTTTGAATGGG
AACATGCGATGACGATGCTTGGAGGGTTGAAGCTAGCGCTAACATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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